RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 POGKQ9P215 609 aa25.03■■□□□ 1.6
CTSA-201ENST00000191018 NSD3Q9BZ95 1437 aa25.03■■□□□ 1.6
CTSA-201ENST00000191018 METP08581 1390 aa25.02■■□□□ 1.6
CTSA-201ENST00000191018 ANKRD36BQ8N2N9 1353 aa25.02■■□□□ 1.6
CTSA-201ENST00000191018 CABP2Q9NPB3 220 aa25.01■■□□□ 1.59
CTSA-201ENST00000191018 SLIT1O75093 1534 aa25■■□□□ 1.59
CTSA-201ENST00000191018 MINK1Q8N4C8 1332 aaPredicted RBP25■■□□□ 1.59
CTSA-201ENST00000191018 ATAD2Q6PL18 1390 aa24.99■■□□□ 1.59
CTSA-201ENST00000191018 TECPR2O15040 1411 aa24.99■■□□□ 1.59
CTSA-201ENST00000191018 BLMP54132 1417 aaPredicted RBP24.99■■□□□ 1.59
CTSA-201ENST00000191018 ARHGAP23Q9P227 1491 aa24.99■■□□□ 1.59
CTSA-201ENST00000191018 PLEKHG1Q9ULL1 1385 aa24.98■■□□□ 1.59
CTSA-201ENST00000191018 ADAMTS13Q76LX8 1427 aa24.98■■□□□ 1.59
CTSA-201ENST00000191018 CPS1P31327 1500 aa24.98■■□□□ 1.59
CTSA-201ENST00000191018 SRPK2P78362 688 aaKnown RBP24.96■■□□□ 1.59
CTSA-201ENST00000191018 PLEKHH1Q9ULM0 1364 aa24.95■■□□□ 1.58
CTSA-201ENST00000191018 SIRT1Q96EB6 747 aa24.95■■□□□ 1.58
CTSA-201ENST00000191018 FAM135BQ49AJ0 1406 aa24.95■■□□□ 1.58
CTSA-201ENST00000191018 LTKP29376 864 aa24.94■■□□□ 1.58
CTSA-201ENST00000191018 SMG6Q86US8 1419 aaKnown RBP24.94■■□□□ 1.58
CTSA-201ENST00000191018 MED14O60244 1454 aa24.93■■□□□ 1.58
CTSA-201ENST00000191018 RIMS1Q86UR5 1692 aaKnown RBP24.93■■□□□ 1.58
CTSA-201ENST00000191018 WAPLQ7Z5K2 1190 aa24.93■■□□□ 1.58
CTSA-201ENST00000191018 CGNL1Q0VF96 1302 aa24.92■■□□□ 1.58
CTSA-201ENST00000191018 CD163L1Q9NR16 1453 aa24.92■■□□□ 1.58
CTSA-201ENST00000191018 CDK19Q9BWU1 502 aa24.92■■□□□ 1.58
CTSA-201ENST00000191018 A0A1W2PP64 1363 aa24.91■■□□□ 1.58
CTSA-201ENST00000191018 NSD2O96028 1365 aa24.91■■□□□ 1.58
CTSA-201ENST00000191018 ADAMTSL3P82987 1691 aa24.91■■□□□ 1.58
CTSA-201ENST00000191018 FKBP8Q14318 412 aa24.9■■□□□ 1.58
CTSA-201ENST00000191018 NEFLP07196 543 aa24.89■■□□□ 1.58
CTSA-201ENST00000191018 TXNDC2Q86VQ3 553 aa24.89■■□□□ 1.57
CTSA-201ENST00000191018 EID1Q9Y6B2 187 aa24.87■■□□□ 1.57
CTSA-201ENST00000191018 ADAMTS8Q9UP79 889 aa24.87■■□□□ 1.57
CTSA-201ENST00000191018 NUDCQ9Y266 331 aa24.87■■□□□ 1.57
CTSA-201ENST00000191018 CEP170BQ9Y4F5 1589 aaPredicted RBP24.87■■□□□ 1.57
CTSA-201ENST00000191018 THEMISQ8N1K5 641 aaPredicted RBP24.86■■□□□ 1.57
CTSA-201ENST00000191018 BCANQ96GW7 911 aa24.86■■□□□ 1.57
CTSA-201ENST00000191018 ANKRD26Q9UPS8 1709 aa24.86■■□□□ 1.57
CTSA-201ENST00000191018 POLR3AO14802 1390 aaPredicted RBP24.86■■□□□ 1.57
CTSA-201ENST00000191018 MORC1Q86VD1 984 aa24.85■■□□□ 1.57
CTSA-201ENST00000191018 PLPPR3Q6T4P5 718 aa24.85■■□□□ 1.57
CTSA-201ENST00000191018 TERF2IPQ9NYB0 399 aa24.85■■□□□ 1.57
CTSA-201ENST00000191018 SENP3-EIF4A1A0A087X0R7 540 aa24.83■■□□□ 1.57
CTSA-201ENST00000191018 WDR43Q15061 677 aaKnown RBP eCLIP24.83■■□□□ 1.57
CTSA-201ENST00000191018 DIP2AQ14689 1571 aa24.83■■□□□ 1.57
CTSA-201ENST00000191018 ATP7BP35670 1465 aa24.83■■□□□ 1.57
CTSA-201ENST00000191018 WASLO00401 505 aaPredicted RBP24.82■■□□□ 1.56
CTSA-201ENST00000191018 ZNF142P52746 1687 aaPredicted RBP24.82■■□□□ 1.56
CTSA-201ENST00000191018 ADGRB2O60241 1585 aa24.82■■□□□ 1.56
CTSA-201ENST00000191018 ROBO2Q9HCK4 1378 aa24.81■■□□□ 1.56
CTSA-201ENST00000191018 SHPRHQ149N8 1683 aa24.8■■□□□ 1.56
CTSA-201ENST00000191018 PTPRUQ92729 1446 aa24.8■■□□□ 1.56
CTSA-201ENST00000191018 PDE3BQ13370 1112 aa24.79■■□□□ 1.56
CTSA-201ENST00000191018 CABP1Q9NZU7 370 aa24.79■■□□□ 1.56
CTSA-201ENST00000191018 KIF20BQ96Q89 1820 aa24.79■■□□□ 1.56
CTSA-201ENST00000191018 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.79■■□□□ 1.56
CTSA-201ENST00000191018 TBX22Q9Y458 520 aa24.79■■□□□ 1.56
CTSA-201ENST00000191018 HDGFL2Q7Z4V5 671 aaPredicted RBP24.78■■□□□ 1.56
CTSA-201ENST00000191018 SLC26A8Q96RN1 970 aa24.76■■□□□ 1.55
CTSA-201ENST00000191018 SETD1BQ9UPS6 1966 aaKnown RBP24.75■■□□□ 1.55
CTSA-201ENST00000191018 CPSF1Q10570 1443 aaKnown RBP24.74■■□□□ 1.55
CTSA-201ENST00000191018 FYB1O15117 783 aa24.74■■□□□ 1.55
CTSA-201ENST00000191018 PTCH1Q13635 1447 aa24.73■■□□□ 1.55
CTSA-201ENST00000191018 PPIP5K1Q6PFW1 1433 aa24.73■■□□□ 1.55
CTSA-201ENST00000191018 XRN1Q8IZH2 1706 aaKnown RBP24.73■■□□□ 1.55
CTSA-201ENST00000191018 TNNT2P45379 298 aaPredicted RBP24.72■■□□□ 1.55
CTSA-201ENST00000191018 SALL2Q9Y467 1007 aaPredicted RBP24.72■■□□□ 1.55
CTSA-201ENST00000191018 CDC42BPGQ6DT37 1551 aa24.72■■□□□ 1.55
CTSA-201ENST00000191018 MON2Q7Z3U7 1717 aa24.72■■□□□ 1.55
CTSA-201ENST00000191018 AKAP12Q02952 1782 aa24.72■■□□□ 1.55
CTSA-201ENST00000191018 RNF123Q5XPI4 1314 aa24.71■■□□□ 1.55
CTSA-201ENST00000191018 MTHFSP49914 203 aa24.7■■□□□ 1.55
CTSA-201ENST00000191018 NUDT16Q96DE0 195 aaKnown RBP24.7■■□□□ 1.55
CTSA-201ENST00000191018 TOPAZ1Q8N9V7 1692 aa24.7■■□□□ 1.54
CTSA-201ENST00000191018 GGNBP2Q9H3C7 697 aa24.7■■□□□ 1.54
CTSA-201ENST00000191018 ERICH6BQ5W0A0 696 aa24.69■■□□□ 1.54
CTSA-201ENST00000191018 CCDC61Q9Y6R9 512 aa24.69■■□□□ 1.54
CTSA-201ENST00000191018 AMOTL2Q9Y2J4 779 aa24.68■■□□□ 1.54
CTSA-201ENST00000191018 ITSN1Q15811 1721 aa24.68■■□□□ 1.54
CTSA-201ENST00000191018 EDC4Q6P2E9 1401 aaKnown RBP24.67■■□□□ 1.54
CTSA-201ENST00000191018 ZNF521Q96K83 1311 aa24.67■■□□□ 1.54
CTSA-201ENST00000191018 PIK3R4Q99570 1358 aa24.67■■□□□ 1.54
CTSA-201ENST00000191018 PRR36Q9H6K5 1346 aa24.66■■□□□ 1.54
CTSA-201ENST00000191018 CFAP53Q96M91 514 aa24.66■■□□□ 1.54
CTSA-201ENST00000191018 CDCA7LQ96GN5 454 aa24.65■■□□□ 1.54
CTSA-201ENST00000191018 IRX6P78412 446 aaPredicted RBP24.64■■□□□ 1.54
CTSA-201ENST00000191018 CCDC146Q8IYE0 955 aa24.63■■□□□ 1.53
CTSA-201ENST00000191018 COL3A1P02461 1466 aaPredicted RBP24.62■■□□□ 1.53
CTSA-201ENST00000191018 NCKAP5LQ9HCH0 1330 aa24.62■■□□□ 1.53
CTSA-201ENST00000191018 NGEFQ8N5V2 710 aa24.61■■□□□ 1.53
CTSA-201ENST00000191018 CHD2O14647 1828 aaKnown RBP24.6■■□□□ 1.53
CTSA-201ENST00000191018 APAF1O14727 1248 aa24.6■■□□□ 1.53
CTSA-201ENST00000191018 ANKLE2Q86XL3 938 aa24.6■■□□□ 1.53
CTSA-201ENST00000191018 NRKQ7Z2Y5 1582 aa24.6■■□□□ 1.53
CTSA-201ENST00000191018 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.58■■□□□ 1.53
CTSA-201ENST00000191018 ZNF692Q9BU19 519 aaPredicted RBP24.58■■□□□ 1.53
CTSA-201ENST00000191018 IQSEC2Q5JU85 1478 aa24.58■■□□□ 1.52
CTSA-201ENST00000191018 PNPLA6Q8IY17 1366 aa24.57■■□□□ 1.52
CTSA-201ENST00000191018 PLEKHG3A1L390 1219 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms