RNA–Protein interactions for RNA: ENST00000013034.3

NME1-201, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3 BASIC

Gene NME1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-201ENST00000013034 ATRNO75882 1429 aa16.92■□□□□ 0.3
NME1-201ENST00000013034 FNBP4Q8N3X1 1017 aaPredicted RBP16.91■□□□□ 0.3
NME1-201ENST00000013034 NPHP3Q7Z494 1330 aa16.9■□□□□ 0.3
NME1-201ENST00000013034 PPLO60437 1756 aa16.89■□□□□ 0.3
NME1-201ENST00000013034 PXDNQ92626 1479 aa16.89■□□□□ 0.29
NME1-201ENST00000013034 FOXD1Q16676 465 aa16.88■□□□□ 0.29
NME1-201ENST00000013034 TECPR2O15040 1411 aa16.87■□□□□ 0.29
NME1-201ENST00000013034 BCL9LQ86UU0 1499 aa16.85■□□□□ 0.29
NME1-201ENST00000013034 PPARGC1BQ86YN6 1023 aaKnown RBP16.84■□□□□ 0.29
NME1-201ENST00000013034 LRPPRCP42704 1394 aaKnown RBP16.84■□□□□ 0.29
NME1-201ENST00000013034 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.84■□□□□ 0.29
NME1-201ENST00000013034 MARF1Q9Y4F3 1742 aaKnown RBP16.84■□□□□ 0.29
NME1-201ENST00000013034 SRCAPQ6ZRS2 3230 aa16.83■□□□□ 0.29
NME1-201ENST00000013034 ESCO1Q5FWF5 840 aa16.83■□□□□ 0.28
NME1-201ENST00000013034 SLC4A1APQ9BWU0 796 aaKnown RBP16.83■□□□□ 0.28
NME1-201ENST00000013034 KNDC1Q76NI1 1749 aa16.82■□□□□ 0.28
NME1-201ENST00000013034 CCDC125Q86Z20 511 aa16.81■□□□□ 0.28
NME1-201ENST00000013034 ZRANB1Q9UGI0 708 aa16.81■□□□□ 0.28
NME1-201ENST00000013034 KIF1AQ12756 1690 aa16.81■□□□□ 0.28
NME1-201ENST00000013034 EP400Q96L91 3159 aa16.81■□□□□ 0.28
NME1-201ENST00000013034 CCDC144AA2RUR9 1427 aa16.8■□□□□ 0.28
NME1-201ENST00000013034 ANKRD30BQ9BXX2 1392 aa16.79■□□□□ 0.28
NME1-201ENST00000013034 SLIT2O94813 1529 aa16.79■□□□□ 0.28
NME1-201ENST00000013034 ABCC11Q96J66 1382 aa16.78■□□□□ 0.28
NME1-201ENST00000013034 USP32Q8NFA0 1604 aa16.78■□□□□ 0.28
NME1-201ENST00000013034 FOXO3O43524 673 aa16.78■□□□□ 0.28
NME1-201ENST00000013034 GJD4Q96KN9 370 aaPredicted RBP16.78■□□□□ 0.28
NME1-201ENST00000013034 FMN2Q9NZ56 1722 aa16.78■□□□□ 0.28
NME1-201ENST00000013034 IFT172Q9UG01 1749 aa16.78■□□□□ 0.28
NME1-201ENST00000013034 SPATA31E1Q6ZUB1 1445 aa16.78■□□□□ 0.28
NME1-201ENST00000013034 ADGRF5Q8IZF2 1346 aa16.77■□□□□ 0.28
NME1-201ENST00000013034 XPCQ01831 940 aaPredicted RBP16.77■□□□□ 0.28
NME1-201ENST00000013034 RALGAPBQ86X10 1494 aa16.77■□□□□ 0.28
NME1-201ENST00000013034 PIK3C2GO75747 1445 aa16.77■□□□□ 0.27
NME1-201ENST00000013034 GLI3P10071 1580 aa16.77■□□□□ 0.27
NME1-201ENST00000013034 BLMP54132 1417 aaPredicted RBP16.76■□□□□ 0.27
NME1-201ENST00000013034 SPATA31A3Q5VYP0 1347 aa16.75■□□□□ 0.27
NME1-201ENST00000013034 UNC5CLQ8IV45 518 aa16.74■□□□□ 0.27
NME1-201ENST00000013034 PLEKHH1Q9ULM0 1364 aa16.74■□□□□ 0.27
NME1-201ENST00000013034 TNS3Q68CZ2 1445 aa16.73■□□□□ 0.27
NME1-201ENST00000013034 YTHDC2Q9H6S0 1430 aaKnown RBP16.73■□□□□ 0.27
NME1-201ENST00000013034 WAPLQ7Z5K2 1190 aa16.73■□□□□ 0.27
NME1-201ENST00000013034 STK26Q9P289 416 aa16.73■□□□□ 0.27
NME1-201ENST00000013034 NUTM2FA1L443 756 aa16.72■□□□□ 0.27
NME1-201ENST00000013034 RGL3Q3MIN7 710 aa16.69■□□□□ 0.26
NME1-201ENST00000013034 NWD2Q9ULI1 1742 aa16.69■□□□□ 0.26
NME1-201ENST00000013034 PLCH1Q4KWH8 1693 aa16.69■□□□□ 0.26
NME1-201ENST00000013034 NRXN1Q9ULB1 1477 aa16.68■□□□□ 0.26
NME1-201ENST00000013034 ABCA3Q99758 1704 aa16.68■□□□□ 0.26
NME1-201ENST00000013034 TMEM132EQ6IEE7 984 aa16.68■□□□□ 0.26
NME1-201ENST00000013034 KRT28Q7Z3Y7 464 aa16.68■□□□□ 0.26
NME1-201ENST00000013034 SIRT1Q96EB6 747 aa16.68■□□□□ 0.26
NME1-201ENST00000013034 SBNO1A3KN83 1393 aa16.67■□□□□ 0.26
NME1-201ENST00000013034 ARHGEF10O15013 1369 aa16.67■□□□□ 0.26
NME1-201ENST00000013034 HAP1P54257 671 aaPredicted RBP16.67■□□□□ 0.26
NME1-201ENST00000013034 VPS72Q15906 364 aa16.67■□□□□ 0.26
NME1-201ENST00000013034 PSME1Q06323 249 aa16.66■□□□□ 0.26
NME1-201ENST00000013034 PHF8Q9UPP1 1060 aa16.66■□□□□ 0.26
NME1-201ENST00000013034 ANKARQ7Z5J8 1434 aa16.65■□□□□ 0.26
NME1-201ENST00000013034 SF3B2Q13435 895 aaKnown RBP16.65■□□□□ 0.26
NME1-201ENST00000013034 ADGRB2O60241 1585 aa16.64■□□□□ 0.25
NME1-201ENST00000013034 LRP5O75197 1615 aa16.64■□□□□ 0.25
NME1-201ENST00000013034 BRWD3Q6RI45 1802 aa16.64■□□□□ 0.25
NME1-201ENST00000013034 SEPT12Q8IYM1 358 aa16.64■□□□□ 0.25
NME1-201ENST00000013034 MPHOSPH9Q99550 1183 aa16.64■□□□□ 0.25
NME1-201ENST00000013034 DLC1Q96QB1 1528 aa16.64■□□□□ 0.25
NME1-201ENST00000013034 DHX57Q6P158 1386 aaKnown RBP16.64■□□□□ 0.25
NME1-201ENST00000013034 C14orf93Q9H972 538 aaKnown RBP16.62■□□□□ 0.25
NME1-201ENST00000013034 ONECUT3O60422 494 aaPredicted RBP16.61■□□□□ 0.25
NME1-201ENST00000013034 DEFB132Q7Z7B7 95 aa16.61■□□□□ 0.25
NME1-201ENST00000013034 NRAPQ86VF7 1730 aa16.6■□□□□ 0.25
NME1-201ENST00000013034 KRT27Q7Z3Y8 459 aa16.6■□□□□ 0.25
NME1-201ENST00000013034 CABLES1Q8TDN4 633 aa16.6■□□□□ 0.25
NME1-201ENST00000013034 CCDC9Q9Y3X0 531 aaKnown RBP16.6■□□□□ 0.25
NME1-201ENST00000013034 ACIN1Q9UKV3 1341 aaKnown RBP16.6■□□□□ 0.25
NME1-201ENST00000013034 RGPD8O14715 1765 aaPredicted RBP16.59■□□□□ 0.25
NME1-201ENST00000013034 PRAM1Q96QH2 718 aa16.59■□□□□ 0.25
NME1-201ENST00000013034 EIF3AQ14152 1382 aaKnown RBP16.59■□□□□ 0.25
NME1-201ENST00000013034 TRPM3Q9HCF6 1732 aaPredicted RBP16.58■□□□□ 0.24
NME1-201ENST00000013034 CFAP70Q5T0N1 1121 aa16.57■□□□□ 0.24
NME1-201ENST00000013034 LMOD2Q6P5Q4 547 aa16.57■□□□□ 0.24
NME1-201ENST00000013034 COL14A1Q05707 1796 aaKnown RBP16.56■□□□□ 0.24
NME1-201ENST00000013034 ADGRB1O14514 1584 aa16.56■□□□□ 0.24
NME1-201ENST00000013034 TULP4Q9NRJ4 1543 aa16.56■□□□□ 0.24
NME1-201ENST00000013034 BAG6P46379 1132 aa16.56■□□□□ 0.24
NME1-201ENST00000013034 ALS2Q96Q42 1657 aa16.56■□□□□ 0.24
NME1-201ENST00000013034 A0A0G2JS52 829 aa16.55■□□□□ 0.24
NME1-201ENST00000013034 MYT1Q01538 1121 aa16.55■□□□□ 0.24
NME1-201ENST00000013034 SAFB2Q14151 953 aaKnown RBP eCLIP16.55■□□□□ 0.24
NME1-201ENST00000013034 GPRASP1Q5JY77 1395 aa16.54■□□□□ 0.24
NME1-201ENST00000013034 FAM83GA6ND36 823 aa16.54■□□□□ 0.24
NME1-201ENST00000013034 PLEKHG5O94827 1062 aa16.54■□□□□ 0.24
NME1-201ENST00000013034 POGKQ9P215 609 aa16.54■□□□□ 0.24
NME1-201ENST00000013034 RGPD1P0DJD0 1748 aa16.53■□□□□ 0.24
NME1-201ENST00000013034 PMFBP1Q8TBY8 1022 aa16.53■□□□□ 0.24
NME1-201ENST00000013034 DISP2A7MBM2 1401 aa16.53■□□□□ 0.24
NME1-201ENST00000013034 FAM98CQ17RN3 349 aaKnown RBP16.52■□□□□ 0.24
NME1-201ENST00000013034 BTG4Q9NY30 223 aa16.52■□□□□ 0.24
NME1-201ENST00000013034 THSD7AQ9UPZ6 1657 aa16.52■□□□□ 0.23
NME1-201ENST00000013034 CRYBG1Q9Y4K1 1723 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms