RNA–Protein interactions for RNA: ENSMUST00000215510.1

Usp47-206, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

TSL 5 BASIC

Gene Usp47, Length 4,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-206ENSMUST00000215510 Q3UJC8 639 aa12.85□□□□□ -0.35
Usp47-206ENSMUST00000215510 Kcnh8P59111 1102 aa12.85□□□□□ -0.35
Usp47-206ENSMUST00000215510 Smg7Q5RJH6 1138 aaKnown RBP12.85□□□□□ -0.35
Usp47-206ENSMUST00000215510 Zranb1Q7M760 708 aa12.85□□□□□ -0.35
Usp47-206ENSMUST00000215510 PtmsQ9D0J8 101 aaKnown RBP12.84□□□□□ -0.35
Usp47-206ENSMUST00000215510 Phactr2B1AVP0 632 aa12.84□□□□□ -0.35
Usp47-206ENSMUST00000215510 Gm21680A0A0G2JGR8 267 aa12.84□□□□□ -0.35
Usp47-206ENSMUST00000215510 Dhx16G3X8X0 1044 aaKnown RBP12.83□□□□□ -0.36
Usp47-206ENSMUST00000215510 Speer4bQ9D9F7 267 aa12.83□□□□□ -0.36
Usp47-206ENSMUST00000215510 Sytl4Q9R0Q1 673 aa12.82□□□□□ -0.36
Usp47-206ENSMUST00000215510 Plekhh1Q80TI1 1356 aa12.82□□□□□ -0.36
Usp47-206ENSMUST00000215510 Hmox1P14901 289 aa12.82□□□□□ -0.36
Usp47-206ENSMUST00000215510 Stk11ipQ3TAA7 1072 aa12.82□□□□□ -0.36
Usp47-206ENSMUST00000215510 Gm10563F6WIE4 79 aa12.82□□□□□ -0.36
Usp47-206ENSMUST00000215510 Mlh3A0A1Y7VMP7 1443 aa12.81□□□□□ -0.36
Usp47-206ENSMUST00000215510 PxdnQ3UQ28 1475 aa12.81□□□□□ -0.36
Usp47-206ENSMUST00000215510 Dnai2A2AC93 623 aa12.81□□□□□ -0.36
Usp47-206ENSMUST00000215510 OvosQ3UU35 1456 aa12.81□□□□□ -0.36
Usp47-206ENSMUST00000215510 Disp1Q3TDN0 1521 aa12.81□□□□□ -0.36
Usp47-206ENSMUST00000215510 Smarce1O54941 411 aaKnown RBP12.8□□□□□ -0.36
Usp47-206ENSMUST00000215510 TmpoQ61033 693 aaKnown RBP12.8□□□□□ -0.36
Usp47-206ENSMUST00000215510 R3hcc1Q8BSI6 488 aa12.8□□□□□ -0.36
Usp47-206ENSMUST00000215510 Acsbg1Q99PU5 721 aa12.8□□□□□ -0.36
Usp47-206ENSMUST00000215510 Ccer1Q9CQL2 403 aa12.8□□□□□ -0.36
Usp47-206ENSMUST00000215510 Fam50bQ9WTJ8 334 aa12.8□□□□□ -0.36
Usp47-206ENSMUST00000215510 Nek4Q9Z1J2 792 aa12.8□□□□□ -0.36
Usp47-206ENSMUST00000215510 Filip1lQ6P6L0 1131 aa12.8□□□□□ -0.36
Usp47-206ENSMUST00000215510 Gimap6Q8K349 305 aa12.8□□□□□ -0.36
Usp47-206ENSMUST00000215510 Trappc8E9PWG2 1437 aa12.8□□□□□ -0.36
Usp47-206ENSMUST00000215510 Ttll13A4Q9F6 804 aa12.8□□□□□ -0.36
Usp47-206ENSMUST00000215510 Prkrip1Q9CWV6 186 aaKnown RBP12.8□□□□□ -0.36
Usp47-206ENSMUST00000215510 Atp6v1dP57746 247 aa12.8□□□□□ -0.36
Usp47-206ENSMUST00000215510 Caskin1Q6P9K8 1431 aa12.79□□□□□ -0.36
Usp47-206ENSMUST00000215510 Thoc2B1AZI6 1594 aaKnown RBP12.79□□□□□ -0.36
Usp47-206ENSMUST00000215510 Gm21663A0A0G2JE01 267 aa12.79□□□□□ -0.36
Usp47-206ENSMUST00000215510 Gm7361D3Z6R1 267 aa12.79□□□□□ -0.36
Usp47-206ENSMUST00000215510 5031410I06RikE9Q4E0 267 aa12.79□□□□□ -0.36
Usp47-206ENSMUST00000215510 Gm1979E9QAN3 267 aa12.79□□□□□ -0.36
Usp47-206ENSMUST00000215510 Gm5862K7N5V5 267 aa12.79□□□□□ -0.36
Usp47-206ENSMUST00000215510 Gm10220K7N660 267 aa12.79□□□□□ -0.36
Usp47-206ENSMUST00000215510 TkfcQ8VC30 578 aa12.79□□□□□ -0.36
Usp47-206ENSMUST00000215510 Stk3Q9JI10 497 aa12.79□□□□□ -0.36
Usp47-206ENSMUST00000215510 Ankrd26Q811D2 1581 aa12.79□□□□□ -0.36
Usp47-206ENSMUST00000215510 SlkO54988 1233 aa12.79□□□□□ -0.36
Usp47-206ENSMUST00000215510 Rbm5Q91YE7 815 aaKnown RBP12.79□□□□□ -0.36
Usp47-206ENSMUST00000215510 TefQ9JLC6 301 aa12.79□□□□□ -0.36
Usp47-206ENSMUST00000215510 Map3k13Q1HKZ5 959 aa12.78□□□□□ -0.36
Usp47-206ENSMUST00000215510 NexnQ7TPW1 607 aa12.78□□□□□ -0.36
Usp47-206ENSMUST00000215510 3425401B19RikD3Z1D3 1412 aa12.78□□□□□ -0.36
Usp47-206ENSMUST00000215510 PsapQ61207 557 aaKnown RBP12.78□□□□□ -0.36
Usp47-206ENSMUST00000215510 Slx4Q6P1D7 1565 aa12.78□□□□□ -0.36
Usp47-206ENSMUST00000215510 Atxn3Q9CVD2 355 aa12.77□□□□□ -0.36
Usp47-206ENSMUST00000215510 Sugp2Q8CH09 1067 aa12.77□□□□□ -0.36
Usp47-206ENSMUST00000215510 CrcpO35427 148 aa12.77□□□□□ -0.37
Usp47-206ENSMUST00000215510 Atl3Q91YH5 541 aa12.77□□□□□ -0.37
Usp47-206ENSMUST00000215510 Tomm22Q9CPQ3 142 aa12.77□□□□□ -0.37
Usp47-206ENSMUST00000215510 Klf15Q9EPW2 415 aa12.76□□□□□ -0.37
Usp47-206ENSMUST00000215510 Nol12Q8BG17 217 aa12.76□□□□□ -0.37
Usp47-206ENSMUST00000215510 Ccdc171E9Q1U1 1324 aa12.76□□□□□ -0.37
Usp47-206ENSMUST00000215510 FosbP13346 338 aa12.76□□□□□ -0.37
Usp47-206ENSMUST00000215510 Gm1043A0A140LJC2 1431 aa12.75□□□□□ -0.37
Usp47-206ENSMUST00000215510 St18Q80TY4 1045 aa12.75□□□□□ -0.37
Usp47-206ENSMUST00000215510 Exoc6bA6H5Z3 810 aa12.75□□□□□ -0.37
Usp47-206ENSMUST00000215510 Ccne1Q61457 408 aa12.75□□□□□ -0.37
Usp47-206ENSMUST00000215510 Gnl3lQ6PGG6 577 aaKnown RBP12.75□□□□□ -0.37
Usp47-206ENSMUST00000215510 BC005561E9Q5E2 1589 aa12.75□□□□□ -0.37
Usp47-206ENSMUST00000215510 Ccdc183A2AJB1 534 aa12.75□□□□□ -0.37
Usp47-206ENSMUST00000215510 Cdc37l1Q9CZP7 335 aa12.75□□□□□ -0.37
Usp47-206ENSMUST00000215510 SkilQ60665 675 aa12.74□□□□□ -0.37
Usp47-206ENSMUST00000215510 Tpm3-rs7D3Z2H9 248 aa12.74□□□□□ -0.37
Usp47-206ENSMUST00000215510 Cwc27Q3TKY6 469 aa12.74□□□□□ -0.37
Usp47-206ENSMUST00000215510 BccipQ9CWI3 316 aa12.74□□□□□ -0.37
Usp47-206ENSMUST00000215510 Cyp46a1Q9WVK8 500 aa12.74□□□□□ -0.37
Usp47-206ENSMUST00000215510 Rsph3aQ3UFY4 516 aa12.74□□□□□ -0.37
Usp47-206ENSMUST00000215510 Nol8Q3UHX0 1147 aaKnown RBP12.74□□□□□ -0.37
Usp47-206ENSMUST00000215510 IbtkQ6ZPR6 1352 aaKnown RBP12.74□□□□□ -0.37
Usp47-206ENSMUST00000215510 Fancd2Q80V62 1450 aa12.74□□□□□ -0.37
Usp47-206ENSMUST00000215510 TnikP83510 1323 aa12.73□□□□□ -0.37
Usp47-206ENSMUST00000215510 Slc12a5Q91V14 1138 aa12.73□□□□□ -0.37
Usp47-206ENSMUST00000215510 Gm973E9Q295 1059 aa12.73□□□□□ -0.37
Usp47-206ENSMUST00000215510 Erc2Q6PH08 957 aa12.73□□□□□ -0.37
Usp47-206ENSMUST00000215510 Mapkbp1Q6NS57 1503 aa12.72□□□□□ -0.37
Usp47-206ENSMUST00000215510 Mcm10Q0VBD2 885 aa12.72□□□□□ -0.37
Usp47-206ENSMUST00000215510 Pla2r1Q62028 1487 aa12.72□□□□□ -0.37
Usp47-206ENSMUST00000215510 Casq1O09165 405 aa12.72□□□□□ -0.37
Usp47-206ENSMUST00000215510 Gnai2P08752 355 aaKnown RBP12.72□□□□□ -0.37
Usp47-206ENSMUST00000215510 L3mbtl2P59178 703 aa12.72□□□□□ -0.37
Usp47-206ENSMUST00000215510 Dmrt2Q8BG36 561 aa12.72□□□□□ -0.37
Usp47-206ENSMUST00000215510 Cetn4Q8K4K1 168 aa12.72□□□□□ -0.37
Usp47-206ENSMUST00000215510 Samd9lQ69Z37 1561 aa12.72□□□□□ -0.37
Usp47-206ENSMUST00000215510 Polr3aB2RXC6 1390 aa12.72□□□□□ -0.37
Usp47-206ENSMUST00000215510 Abl1P00520 1123 aa12.71□□□□□ -0.37
Usp47-206ENSMUST00000215510 Irx3P81067 507 aa12.71□□□□□ -0.37
Usp47-206ENSMUST00000215510 Ddx11Q6AXC6 880 aa12.71□□□□□ -0.37
Usp47-206ENSMUST00000215510 Noc3lQ8VI84 807 aaKnown RBP12.71□□□□□ -0.37
Usp47-206ENSMUST00000215510 Stard3nlQ9DCI3 235 aa12.71□□□□□ -0.37
Usp47-206ENSMUST00000215510 Cplx2P84086 134 aa12.71□□□□□ -0.37
Usp47-206ENSMUST00000215510 Btbd11Q6GQW0 1109 aa12.71□□□□□ -0.38
Usp47-206ENSMUST00000215510 Tspyl2Q7TQI8 677 aa12.71□□□□□ -0.38
Usp47-206ENSMUST00000215510 Asxl1P59598 1514 aa12.7□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 52 ms