RNA–Protein interactions for RNA: ENSMUST00000213874.1

Usp28-203, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp28, Length 4,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-203ENSMUST00000213874 Rsph4aQ8BYM7 716 aa11.64□□□□□ -0.55
Usp28-203ENSMUST00000213874 Unc13aQ4KUS2 1712 aa11.64□□□□□ -0.55
Usp28-203ENSMUST00000213874 Babam1Q3UI43 333 aa11.64□□□□□ -0.55
Usp28-203ENSMUST00000213874 Kif18aQ91WD7 886 aa11.64□□□□□ -0.55
Usp28-203ENSMUST00000213874 Dnajc14Q921R4 703 aa11.64□□□□□ -0.55
Usp28-203ENSMUST00000213874 Nsfl1cQ9CZ44 370 aaKnown RBP11.64□□□□□ -0.55
Usp28-203ENSMUST00000213874 Naip6Q9JIB6 1403 aa11.64□□□□□ -0.55
Usp28-203ENSMUST00000213874 Polr1aO35134 1717 aaKnown RBP11.64□□□□□ -0.55
Usp28-203ENSMUST00000213874 Rabep1O35551 862 aa11.64□□□□□ -0.55
Usp28-203ENSMUST00000213874 Dnajc5P60904 198 aa11.64□□□□□ -0.55
Usp28-203ENSMUST00000213874 Gpatch11Q3UFS4 262 aa11.64□□□□□ -0.55
Usp28-203ENSMUST00000213874 Sytl4Q9R0Q1 673 aa11.64□□□□□ -0.55
Usp28-203ENSMUST00000213874 Pcmtd1P59913 357 aa11.63□□□□□ -0.55
Usp28-203ENSMUST00000213874 Utp14aQ640M1 767 aaKnown RBP11.63□□□□□ -0.55
Usp28-203ENSMUST00000213874 Ddrgk1Q80WW9 315 aa11.63□□□□□ -0.55
Usp28-203ENSMUST00000213874 VgfQ0VGU4 617 aa11.63□□□□□ -0.55
Usp28-203ENSMUST00000213874 Atp7aQ64430 1491 aa11.63□□□□□ -0.55
Usp28-203ENSMUST00000213874 Map7O88735 730 aa11.63□□□□□ -0.55
Usp28-203ENSMUST00000213874 Smarca5Q91ZW3 1051 aaKnown RBP11.63□□□□□ -0.55
Usp28-203ENSMUST00000213874 Lemd3Q9WU40 921 aa11.63□□□□□ -0.55
Usp28-203ENSMUST00000213874 Pdlim2Q8R1G6 349 aa11.62□□□□□ -0.55
Usp28-203ENSMUST00000213874 Klhdc4Q921I2 584 aa11.62□□□□□ -0.55
Usp28-203ENSMUST00000213874 Pprc1Q6NZN1 1644 aa11.62□□□□□ -0.55
Usp28-203ENSMUST00000213874 Hsp90b1P08113 802 aaKnown RBP11.62□□□□□ -0.55
Usp28-203ENSMUST00000213874 Q9D9H8 365 aa11.62□□□□□ -0.55
Usp28-203ENSMUST00000213874 Camsap2Q8C1B1 1461 aa11.62□□□□□ -0.55
Usp28-203ENSMUST00000213874 Fam13bQ8K2H3 851 aa11.61□□□□□ -0.55
Usp28-203ENSMUST00000213874 Ak9G3UYQ4 1894 aa11.61□□□□□ -0.55
Usp28-203ENSMUST00000213874 Ripk4Q9ERK0 786 aa11.61□□□□□ -0.55
Usp28-203ENSMUST00000213874 Cul9Q80TT8 1865 aa11.61□□□□□ -0.55
Usp28-203ENSMUST00000213874 AlkP97793 1621 aa11.61□□□□□ -0.55
Usp28-203ENSMUST00000213874 Clcn1Q64347 994 aa11.61□□□□□ -0.55
Usp28-203ENSMUST00000213874 Kif14L0N7N1 1674 aaKnown RBP11.61□□□□□ -0.55
Usp28-203ENSMUST00000213874 Polr3aB2RXC6 1390 aa11.6□□□□□ -0.55
Usp28-203ENSMUST00000213874 SphkapQ6NSW3 1687 aa11.6□□□□□ -0.55
Usp28-203ENSMUST00000213874 Arhgap5P97393 1501 aa11.6□□□□□ -0.55
Usp28-203ENSMUST00000213874 KnstrnQ9D9Z1 312 aaKnown RBP11.59□□□□□ -0.55
Usp28-203ENSMUST00000213874 Zmym4A2A791 1549 aaKnown RBP11.59□□□□□ -0.55
Usp28-203ENSMUST00000213874 Phactr2B1AVP0 632 aa11.59□□□□□ -0.55
Usp28-203ENSMUST00000213874 Prex2Q3LAC4 1598 aa11.59□□□□□ -0.55
Usp28-203ENSMUST00000213874 Usp16Q99LG0 825 aa11.59□□□□□ -0.55
Usp28-203ENSMUST00000213874 Neo1P97798 1493 aa11.59□□□□□ -0.55
Usp28-203ENSMUST00000213874 Mcm4P49717 862 aa11.58□□□□□ -0.55
Usp28-203ENSMUST00000213874 Uspl1Q3ULM6 1089 aa11.58□□□□□ -0.56
Usp28-203ENSMUST00000213874 Cpa2Q504N0 417 aa11.58□□□□□ -0.56
Usp28-203ENSMUST00000213874 Safb2Q80YR5 991 aaKnown RBP11.58□□□□□ -0.56
Usp28-203ENSMUST00000213874 Lmtk2Q3TYD6 1471 aa11.58□□□□□ -0.56
Usp28-203ENSMUST00000213874 Magi1Q6RHR9 1471 aa11.58□□□□□ -0.56
Usp28-203ENSMUST00000213874 Ssh2Q5SW75 1423 aa11.58□□□□□ -0.56
Usp28-203ENSMUST00000213874 Cabp2Q9JLK4 216 aa11.58□□□□□ -0.56
Usp28-203ENSMUST00000213874 Adcy10Q8C0T9 1614 aa11.57□□□□□ -0.56
Usp28-203ENSMUST00000213874 Rfx7F8VPJ6 1459 aa11.57□□□□□ -0.56
Usp28-203ENSMUST00000213874 RalgapbQ8BQZ4 1484 aa11.57□□□□□ -0.56
Usp28-203ENSMUST00000213874 Lekr1B2RVN1 116 aa11.57□□□□□ -0.56
Usp28-203ENSMUST00000213874 Kiaa1211Q5PR69 1207 aa11.57□□□□□ -0.56
Usp28-203ENSMUST00000213874 Erbb4Q61527 1308 aa11.56□□□□□ -0.56
Usp28-203ENSMUST00000213874 Fam163aQ8CAA5 168 aa11.56□□□□□ -0.56
Usp28-203ENSMUST00000213874 BbxQ8VBW5 907 aa11.56□□□□□ -0.56
Usp28-203ENSMUST00000213874 Q9D2X8 372 aa11.56□□□□□ -0.56
Usp28-203ENSMUST00000213874 PalmQ9Z0P4 383 aa11.56□□□□□ -0.56
Usp28-203ENSMUST00000213874 Disp1Q3TDN0 1521 aa11.55□□□□□ -0.56
Usp28-203ENSMUST00000213874 P2rx7Q9Z1M0 595 aa11.55□□□□□ -0.56
Usp28-203ENSMUST00000213874 Asxl1P59598 1514 aa11.55□□□□□ -0.56
Usp28-203ENSMUST00000213874 MpripP97434 1024 aa11.55□□□□□ -0.56
Usp28-203ENSMUST00000213874 Rbm27Q5SFM8 1060 aaKnown RBP11.55□□□□□ -0.56
Usp28-203ENSMUST00000213874 Stac3Q8BZ71 360 aa11.54□□□□□ -0.56
Usp28-203ENSMUST00000213874 Cald1E9QA15 768 aaKnown RBP11.54□□□□□ -0.56
Usp28-203ENSMUST00000213874 Cbx1P83917 185 aaKnown RBP11.54□□□□□ -0.56
Usp28-203ENSMUST00000213874 ErbinQ80TH2 1402 aa11.54□□□□□ -0.56
Usp28-203ENSMUST00000213874 Kdm3bQ6ZPY7 1562 aa11.54□□□□□ -0.56
Usp28-203ENSMUST00000213874 Arid4aF8VPQ2 1261 aaKnown RBP11.54□□□□□ -0.56
Usp28-203ENSMUST00000213874 Ggnbp2Q5SV77 696 aa11.54□□□□□ -0.56
Usp28-203ENSMUST00000213874 Ric3Q8BPM6 367 aa11.54□□□□□ -0.56
Usp28-203ENSMUST00000213874 Magi3Q9EQJ9 1476 aa11.53□□□□□ -0.56
Usp28-203ENSMUST00000213874 Terf2O35144 541 aa11.53□□□□□ -0.56
Usp28-203ENSMUST00000213874 Fbxo3Q9DC63 480 aa11.53□□□□□ -0.56
Usp28-203ENSMUST00000213874 SkilQ60665 675 aa11.53□□□□□ -0.56
Usp28-203ENSMUST00000213874 Peg3Q3URU2 1571 aa11.53□□□□□ -0.56
Usp28-203ENSMUST00000213874 Atp2b2Q9R0K7 1198 aa11.53□□□□□ -0.56
Usp28-203ENSMUST00000213874 Tshz3Q8CGV9 1081 aa11.52□□□□□ -0.56
Usp28-203ENSMUST00000213874 Rsph3aQ3UFY4 516 aa11.52□□□□□ -0.57
Usp28-203ENSMUST00000213874 Polr3gQ6NXY9 223 aa11.52□□□□□ -0.57
Usp28-203ENSMUST00000213874 Slc12a5Q91V14 1138 aa11.52□□□□□ -0.57
Usp28-203ENSMUST00000213874 Lrriq1Q0P5X1 1673 aa11.52□□□□□ -0.57
Usp28-203ENSMUST00000213874 Ccdc141E9Q8Q6 1531 aa11.51□□□□□ -0.57
Usp28-203ENSMUST00000213874 Dhx16G3X8X0 1044 aaKnown RBP11.51□□□□□ -0.57
Usp28-203ENSMUST00000213874 Bcl2l13P59017 434 aa11.51□□□□□ -0.57
Usp28-203ENSMUST00000213874 CgnP59242 1191 aa11.51□□□□□ -0.57
Usp28-203ENSMUST00000213874 Supt6hQ62383 1726 aaKnown RBP11.51□□□□□ -0.57
Usp28-203ENSMUST00000213874 Q3UPC7 1272 aa11.5□□□□□ -0.57
Usp28-203ENSMUST00000213874 Gse1Q3U3C9 1213 aa11.5□□□□□ -0.57
Usp28-203ENSMUST00000213874 Kif21aQ9QXL2 1672 aa11.5□□□□□ -0.57
Usp28-203ENSMUST00000213874 FosbP13346 338 aa11.49□□□□□ -0.57
Usp28-203ENSMUST00000213874 Aifm3Q3TY86 605 aa11.49□□□□□ -0.57
Usp28-203ENSMUST00000213874 Pabpn1Q8CCS6 302 aaKnown RBP11.49□□□□□ -0.57
Usp28-203ENSMUST00000213874 AU022751B1B0V2 589 aa11.49□□□□□ -0.57
Usp28-203ENSMUST00000213874 Ppfia3P60469 1194 aa11.49□□□□□ -0.57
Usp28-203ENSMUST00000213874 Ush1cQ9ES64 910 aa11.49□□□□□ -0.57
Usp28-203ENSMUST00000213874 Stk3Q9JI10 497 aa11.49□□□□□ -0.57
Usp28-203ENSMUST00000213874 Tbc1d9Q3UYK3 1264 aa11.49□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 84.8 ms