RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Dip2aQ8BWT5 1523 aa10.18□□□□□ -0.78
Usp40-204ENSMUST00000187758 Bcl9Q9D219 1425 aa10.18□□□□□ -0.78
Usp40-204ENSMUST00000187758 Atp2b2Q9R0K7 1198 aa10.17□□□□□ -0.78
Usp40-204ENSMUST00000187758 InsrP15208 1372 aa10.17□□□□□ -0.78
Usp40-204ENSMUST00000187758 Plekhg1F6S200 1446 aa10.17□□□□□ -0.78
Usp40-204ENSMUST00000187758 PzpQ61838 1495 aa10.16□□□□□ -0.78
Usp40-204ENSMUST00000187758 Prdm10Q3UTQ7 1184 aa10.16□□□□□ -0.78
Usp40-204ENSMUST00000187758 Cep170bQ80U49 1574 aa10.15□□□□□ -0.78
Usp40-204ENSMUST00000187758 Ift172Q6VH22 1749 aa10.15□□□□□ -0.78
Usp40-204ENSMUST00000187758 Gm16486A0A1D5RMD1 1434 aa10.15□□□□□ -0.78
Usp40-204ENSMUST00000187758 MaddQ80U28 1577 aa10.15□□□□□ -0.78
Usp40-204ENSMUST00000187758 Gsto1O09131 240 aa10.14□□□□□ -0.79
Usp40-204ENSMUST00000187758 Csrnp3P59055 597 aa10.14□□□□□ -0.79
Usp40-204ENSMUST00000187758 HnrnpmQ9D0E1 729 aaKnown RBP10.13□□□□□ -0.79
Usp40-204ENSMUST00000187758 Slit3Q9WVB4 1523 aa10.13□□□□□ -0.79
Usp40-204ENSMUST00000187758 Aplp2Q06335 707 aa10.13□□□□□ -0.79
Usp40-204ENSMUST00000187758 Cdk19Q8BWD8 501 aa10.13□□□□□ -0.79
Usp40-204ENSMUST00000187758 Dcaf11Q91VU6 549 aa10.12□□□□□ -0.79
Usp40-204ENSMUST00000187758 Tubgcp6G5E8P0 1769 aa10.12□□□□□ -0.79
Usp40-204ENSMUST00000187758 IghaA0A0A6YXW6 389 aa10.12□□□□□ -0.79
Usp40-204ENSMUST00000187758 Topaz1E5FYH1 1653 aa10.12□□□□□ -0.79
Usp40-204ENSMUST00000187758 Pik3r4Q8VD65 1358 aa10.12□□□□□ -0.79
Usp40-204ENSMUST00000187758 FanciQ8K368 1330 aa10.11□□□□□ -0.79
Usp40-204ENSMUST00000187758 Kif7B7ZNG0 1348 aa10.1□□□□□ -0.79
Usp40-204ENSMUST00000187758 PnisrA2AJT4 805 aaKnown RBP10.1□□□□□ -0.79
Usp40-204ENSMUST00000187758 Nlrp6Q91WS2 869 aa10.08□□□□□ -0.8
Usp40-204ENSMUST00000187758 Abca14E9Q8F8 1683 aa10.08□□□□□ -0.8
Usp40-204ENSMUST00000187758 Lmtk3Q5XJV6 1424 aa10.08□□□□□ -0.8
Usp40-204ENSMUST00000187758 Slc4a2P13808 1237 aaKnown RBP10.08□□□□□ -0.8
Usp40-204ENSMUST00000187758 Zranb1Q7M760 708 aa10.08□□□□□ -0.8
Usp40-204ENSMUST00000187758 Cps1Q8C196 1500 aa10.08□□□□□ -0.8
Usp40-204ENSMUST00000187758 Rpgrip1lQ8CG73 1264 aa10.07□□□□□ -0.8
Usp40-204ENSMUST00000187758 Scaf11E9PZM7 1456 aaKnown RBP10.07□□□□□ -0.8
Usp40-204ENSMUST00000187758 Q3UJC8 639 aa10.07□□□□□ -0.8
Usp40-204ENSMUST00000187758 Znf316Q6PGE4 1016 aa10.07□□□□□ -0.8
Usp40-204ENSMUST00000187758 Rab3gap2Q8BMG7 1366 aa10.06□□□□□ -0.8
Usp40-204ENSMUST00000187758 Ppp2r1aQ76MZ3 589 aa10.06□□□□□ -0.8
Usp40-204ENSMUST00000187758 Rims2Q9EQZ7 1530 aa10.06□□□□□ -0.8
Usp40-204ENSMUST00000187758 Nwd1A6H603 1563 aa10.05□□□□□ -0.8
Usp40-204ENSMUST00000187758 Zscan21Q07231 555 aa10.05□□□□□ -0.8
Usp40-204ENSMUST00000187758 Rimbp3Q3V0F0 1606 aa10.04□□□□□ -0.8
Usp40-204ENSMUST00000187758 Arap3Q8R5G7 1538 aa10.04□□□□□ -0.8
Usp40-204ENSMUST00000187758 Q7TT23 1179 aa10.04□□□□□ -0.8
Usp40-204ENSMUST00000187758 Gprasp1Q5U4C1 1347 aa10.03□□□□□ -0.8
Usp40-204ENSMUST00000187758 Rreb1Q3UH06 1700 aaKnown RBP10.03□□□□□ -0.8
Usp40-204ENSMUST00000187758 Idi2Q8BFZ6 227 aa10.03□□□□□ -0.8
Usp40-204ENSMUST00000187758 NktrP30415 1453 aa10.03□□□□□ -0.8
Usp40-204ENSMUST00000187758 NgefQ8CHT1 710 aa10.02□□□□□ -0.8
Usp40-204ENSMUST00000187758 Map3k19E9Q3S4 1311 aa10.02□□□□□ -0.81
Usp40-204ENSMUST00000187758 NinlQ6ZQ12 1394 aa10.02□□□□□ -0.81
Usp40-204ENSMUST00000187758 Tex14Q7M6U3 1450 aa10.01□□□□□ -0.81
Usp40-204ENSMUST00000187758 Tmem94Q7TSH8 1360 aa10.01□□□□□ -0.81
Usp40-204ENSMUST00000187758 Gm10563F6WIE4 79 aa10.01□□□□□ -0.81
Usp40-204ENSMUST00000187758 Sox12Q04890 314 aa10.01□□□□□ -0.81
Usp40-204ENSMUST00000187758 Adgrl1Q80TR1 1466 aa10□□□□□ -0.81
Usp40-204ENSMUST00000187758 Nrxn1Q9CS84 1514 aa10□□□□□ -0.81
Usp40-204ENSMUST00000187758 Sirt1Q923E4 737 aa10□□□□□ -0.81
Usp40-204ENSMUST00000187758 CatipB9EKE5 520 aa10□□□□□ -0.81
Usp40-204ENSMUST00000187758 Pip4k2bQ80XI4 416 aa10□□□□□ -0.81
Usp40-204ENSMUST00000187758 Usp32F8VPZ3 1604 aa9.99□□□□□ -0.81
Usp40-204ENSMUST00000187758 Brwd3A2AHJ4 1799 aa9.99□□□□□ -0.81
Usp40-204ENSMUST00000187758 Tns3Q5SSZ5 1440 aa9.99□□□□□ -0.81
Usp40-204ENSMUST00000187758 Pik3c2bE9QAN8 1632 aa9.99□□□□□ -0.81
Usp40-204ENSMUST00000187758 Ap3b2Q9JME5 1082 aa9.99□□□□□ -0.81
Usp40-204ENSMUST00000187758 KdrP35918 1367 aa9.98□□□□□ -0.81
Usp40-204ENSMUST00000187758 IbtkQ6ZPR6 1352 aaKnown RBP9.98□□□□□ -0.81
Usp40-204ENSMUST00000187758 Cald1E9QA15 768 aaKnown RBP9.98□□□□□ -0.81
Usp40-204ENSMUST00000187758 PtpruB1AUH1 1446 aa9.98□□□□□ -0.81
Usp40-204ENSMUST00000187758 Med1Q925J9 1575 aa9.98□□□□□ -0.81
Usp40-204ENSMUST00000187758 Phlpp1Q8CHE4 1687 aa9.98□□□□□ -0.81
Usp40-204ENSMUST00000187758 Mak16Q8BGS0 296 aaKnown RBP9.98□□□□□ -0.81
Usp40-204ENSMUST00000187758 Nrxn3Q6P9K9 1571 aa9.97□□□□□ -0.81
Usp40-204ENSMUST00000187758 Kif16bB1AVY7 1312 aa9.97□□□□□ -0.81
Usp40-204ENSMUST00000187758 Kif20bQ80WE4 1774 aaKnown RBP9.97□□□□□ -0.81
Usp40-204ENSMUST00000187758 Atf7ipQ7TT18 1306 aa9.96□□□□□ -0.81
Usp40-204ENSMUST00000187758 Ofd1Q80Z25 1017 aa9.96□□□□□ -0.81
Usp40-204ENSMUST00000187758 Znf710Q3U288 666 aa9.96□□□□□ -0.82
Usp40-204ENSMUST00000187758 Rapgef3Q8VCC8 918 aa9.96□□□□□ -0.82
Usp40-204ENSMUST00000187758 Tnnt3Q9QZ47 272 aa9.96□□□□□ -0.82
Usp40-204ENSMUST00000187758 Tnrc6bQ8BKI2 1810 aaKnown RBP9.96□□□□□ -0.82
Usp40-204ENSMUST00000187758 Bcl11aQ9QYE3 773 aa9.96□□□□□ -0.82
Usp40-204ENSMUST00000187758 Birc3O08863 600 aa9.95□□□□□ -0.82
Usp40-204ENSMUST00000187758 Idi1P58044 227 aa9.95□□□□□ -0.82
Usp40-204ENSMUST00000187758 D430041D05RikF6ZGR6 1678 aa9.95□□□□□ -0.82
Usp40-204ENSMUST00000187758 Eif5bQ05D44 1216 aaKnown RBP9.95□□□□□ -0.82
Usp40-204ENSMUST00000187758 GsdmaQ9EST1 446 aa9.94□□□□□ -0.82
Usp40-204ENSMUST00000187758 Evi5lH3BKQ3 813 aa9.94□□□□□ -0.82
Usp40-204ENSMUST00000187758 Esx1O88933 382 aa9.94□□□□□ -0.82
Usp40-204ENSMUST00000187758 Cyb5rlB1AS42 316 aa9.94□□□□□ -0.82
Usp40-204ENSMUST00000187758 Scn4aQ9ER60 1841 aa9.94□□□□□ -0.82
Usp40-204ENSMUST00000187758 Abcc10Q8R4P9 1501 aa9.94□□□□□ -0.82
Usp40-204ENSMUST00000187758 Rad21Q61550 635 aaKnown RBP9.93□□□□□ -0.82
Usp40-204ENSMUST00000187758 Znf335A2A5K6 1337 aa9.93□□□□□ -0.82
Usp40-204ENSMUST00000187758 Thsd7aQ69ZU6 1645 aa9.93□□□□□ -0.82
Usp40-204ENSMUST00000187758 Slain2Q8CI08 581 aa9.92□□□□□ -0.82
Usp40-204ENSMUST00000187758 C5P06684 1680 aa9.92□□□□□ -0.82
Usp40-204ENSMUST00000187758 Golga2Q921M4 999 aa9.92□□□□□ -0.82
Usp40-204ENSMUST00000187758 Iqsec2Q5DU25 1478 aa9.92□□□□□ -0.82
Usp40-204ENSMUST00000187758 Col14a1Q80X19 1797 aa9.92□□□□□ -0.82
Usp40-204ENSMUST00000187758 Tsen2Q6P7W5 460 aa9.91□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 92.1 ms