RNA–Protein interactions for RNA: ENSMUST00000169108.7

Plec-215, Transcript of Plectin, mouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Plec, Length 14,853 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (Experimental data)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
Plec-215	ENSMUST00000169108	Sv2b	Q8BG39	683 aa		11.95	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Anln	Q8K298	1121 aa	Known RBP	11.95	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Swt1	Q9DBQ9	907 aa		11.95	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Skil	Q60665	675 aa		11.94	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Tubb6	Q922F4	447 aa		11.94	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Usp16	Q99LG0	825 aa		11.94	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Rfx1	P48377	963 aa		11.94	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Pabpn1	Q8CCS6	302 aa	Known RBP	11.94	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Triml2	E9PW10	424 aa		11.94	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Prl7d1	P04769	244 aa		11.94	□□□□□ -0.5
Plec-215	ENSMUST00000169108	1700010I14Rik	Q7TPG0	532 aa		11.94	□□□□□ -0.5
Plec-215	ENSMUST00000169108		Q9D2X8	372 aa		11.94	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Eif3a	P23116	1344 aa	Known RBP	11.94	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Optn	Q8K3K8	584 aa		11.94	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Top2a	Q01320	1528 aa	Known RBP	11.94	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Me1	P06801	572 aa		11.94	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Ppm1f	Q8CGA0	452 aa		11.93	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Atf3	Q60765	181 aa		11.93	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Fam193a	Q8CGI1	1231 aa	Known RBP	11.93	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Cyp46a1	Q9WVK8	500 aa		11.92	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Ecm2	Q5FW85	670 aa		11.92	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Cc2d1a	Q8K1A6	943 aa		11.92	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Efcab5	A0JP43	1406 aa		11.92	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Drc7	Q6V3W6	876 aa		11.92	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Pip4k2a	O70172	405 aa		11.92	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Hmox1	P14901	289 aa		11.91	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Tdrd9	Q14BI7	1383 aa		11.91	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Kiaa0753	Q6A000	959 aa		11.91	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Mns1	Q61884	491 aa		11.91	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Paf1	Q8K2T8	535 aa		11.91	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Esx1	O88933	382 aa		11.91	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Cep112	Q5PR68	954 aa		11.91	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Sirt1	Q923E4	737 aa		11.91	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Cecr2	E9Q2Z1	1453 aa		11.9	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Hnrnpul1	Q8VDM6	859 aa	Known RBP	11.9	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Luc7l	Q9CYI4	371 aa	Known RBP	11.9	□□□□□ -0.5
Plec-215	ENSMUST00000169108	Tef	Q9JLC6	301 aa		11.9	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Cfdp1	O88271	295 aa	Known RBP	11.89	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Shroom4	Q1W617	1475 aa		11.89	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Sycp1	Q62209	993 aa		11.89	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Map1b	P14873	2464 aa	Known RBP	11.89	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Polr3g	Q6NXY9	223 aa		11.89	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Nap1l1	P28656	391 aa	Known RBP	11.89	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Ehmt1	Q5DW34	1296 aa		11.89	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Gcc1	Q9D4H2	778 aa		11.88	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Zkscan2	G3X952	960 aa		11.88	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Tat	Q8QZR1	454 aa		11.88	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Mad1l1	Q9WTX8	717 aa	Known RBP	11.88	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Odf2l	Q9D478	642 aa		11.88	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Eva1c	P58659	440 aa		11.88	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Pdcl3	Q8BVF2	240 aa		11.88	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Ift140	E9PY46	1464 aa		11.88	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Hmgb2	P30681	210 aa	Known RBP	11.88	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Nolc1	E9Q5C9	702 aa	Known RBP	11.87	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Pnmal2	G3X9N3	661 aa		11.87	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Stim1	P70302	685 aa		11.87	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Map3k1	P53349	1493 aa		11.87	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Zpr1	Q62384	459 aa		11.87	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Cavin4	A2AMM0	362 aa		11.87	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Plcd4	Q8K3R3	807 aa		11.87	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Erlin2	Q8BFZ9	340 aa		11.87	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Cdkn1c	P49919	348 aa		11.86	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Psap	Q61207	557 aa	Known RBP	11.86	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Ercc6l	Q8BHK9	1240 aa		11.86	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Arid4a	F8VPQ2	1261 aa	Known RBP	11.86	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Calr	P14211	416 aa	Known RBP	11.86	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Rhot2	Q8JZN7	620 aa		11.86	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Rbm25	B2RY56	838 aa	Known RBP	11.86	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Gimap6	Q8K349	305 aa		11.85	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Hypk	Q9CR41	129 aa		11.85	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Rab3gap2	Q8BMG7	1366 aa		11.85	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Puf60	Q3UEB3	564 aa	Known RBP	11.85	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Selenoo	Q9DBC0	667 aa		11.85	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Rbm28	Q8CGC6	750 aa	Known RBP	11.85	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Nop14	Q8R3N1	860 aa	Known RBP	11.85	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Lrrc45	Q8CIM1	670 aa		11.84	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Usp48	Q3V0C5	1052 aa		11.84	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Prm3	Q62100	101 aa		11.84	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Stard3nl	Q9DCI3	235 aa		11.84	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Gnai2	P08752	355 aa	Known RBP	11.84	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Cd109	Q8R422	1442 aa		11.84	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Mphosph10	Q810V0	681 aa	Known RBP	11.84	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Arhgap31	A6X8Z5	1425 aa		11.84	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Agtpbp1	Q641K1	1218 aa		11.84	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Taok2	Q6ZQ29	1240 aa		11.84	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Phldb2	Q8K1N2	1249 aa		11.84	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Scaper	F8VQ70	1398 aa	Known RBP	11.84	□□□□□ -0.51
Plec-215	ENSMUST00000169108	Ppp2r3a	B2RXC8	1150 aa		11.83	□□□□□ -0.52
Plec-215	ENSMUST00000169108	Ccdc183	A2AJB1	534 aa		11.83	□□□□□ -0.52
Plec-215	ENSMUST00000169108	Ncbp1	Q3UYV9	790 aa	Known RBP	11.83	□□□□□ -0.52
Plec-215	ENSMUST00000169108	Jph4	Q80WT0	628 aa		11.83	□□□□□ -0.52
Plec-215	ENSMUST00000169108	Ccdc96	Q9CR92	584 aa		11.83	□□□□□ -0.52
Plec-215	ENSMUST00000169108	Fmnl2	A2APV2	1086 aa		11.83	□□□□□ -0.52
Plec-215	ENSMUST00000169108	Gtf2f1	Q3THK3	508 aa	Known RBP	11.83	□□□□□ -0.52
Plec-215	ENSMUST00000169108	Txlnb	Q8VBT1	685 aa		11.83	□□□□□ -0.52
Plec-215	ENSMUST00000169108	Tbca	P48428	108 aa	Known RBP	11.83	□□□□□ -0.52
Plec-215	ENSMUST00000169108	Kars	Q99MN1	595 aa	Known RBP	11.83	□□□□□ -0.52
Plec-215	ENSMUST00000169108	Nek4	Q9Z1J2	792 aa		11.83	□□□□□ -0.52
Plec-215	ENSMUST00000169108	Cdkl5	Q3UTQ8	938 aa		11.83	□□□□□ -0.52
Plec-215	ENSMUST00000169108	Atp2b2	Q9R0K7	1198 aa		11.82	□□□□□ -0.52

Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms