RNA–Protein interactions for RNA: ENSMUST00000113697.7

Tpm1-213, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 2 BASIC

Gene Tpm1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-213ENSMUST00000113697 Iqgap1Q9JKF1 1657 aaKnown RBP14.03□□□□□ -0.16
Tpm1-213ENSMUST00000113697 Itsn1Q9Z0R4 1714 aa14.01□□□□□ -0.17
Tpm1-213ENSMUST00000113697 Bcl9Q9D219 1425 aa14.01□□□□□ -0.17
Tpm1-213ENSMUST00000113697 Washc2Q6PGL7 1334 aa14□□□□□ -0.17
Tpm1-213ENSMUST00000113697 Chd2E9PZM4 1827 aaKnown RBP14□□□□□ -0.17
Tpm1-213ENSMUST00000113697 Rgl3Q3UYI5 709 aa14□□□□□ -0.17
Tpm1-213ENSMUST00000113697 Mroh1E0CZ22 1640 aa13.99□□□□□ -0.17
Tpm1-213ENSMUST00000113697 Apba2P98084 750 aa13.99□□□□□ -0.17
Tpm1-213ENSMUST00000113697 Sra1Q80VJ2 232 aa13.98□□□□□ -0.17
Tpm1-213ENSMUST00000113697 AatkQ80YE4 1365 aa13.98□□□□□ -0.17
Tpm1-213ENSMUST00000113697 Mroh3A0A1D5RM54 893 aa13.98□□□□□ -0.17
Tpm1-213ENSMUST00000113697 Cyb5rlB1AS42 316 aa13.98□□□□□ -0.17
Tpm1-213ENSMUST00000113697 Adamts13Q769J6 1426 aa13.97□□□□□ -0.17
Tpm1-213ENSMUST00000113697 Mbd5B1AYB6 1498 aa13.97□□□□□ -0.17
Tpm1-213ENSMUST00000113697 Tulp4Q9JIL5 1547 aa13.97□□□□□ -0.17
Tpm1-213ENSMUST00000113697 Chrm1P12657 460 aa13.96□□□□□ -0.17
Tpm1-213ENSMUST00000113697 GphnQ8BUV3 769 aaKnown RBP13.96□□□□□ -0.17
Tpm1-213ENSMUST00000113697 Naip7Q9JIB3 1402 aa13.96□□□□□ -0.17
Tpm1-213ENSMUST00000113697 Plxnc1Q9QZC2 1574 aa13.95□□□□□ -0.18
Tpm1-213ENSMUST00000113697 Cep152A2AUM9 1736 aaKnown RBP13.95□□□□□ -0.18
Tpm1-213ENSMUST00000113697 Myom1Q62234 1667 aaKnown RBP13.95□□□□□ -0.18
Tpm1-213ENSMUST00000113697 Prrc2bQ7TPM1 1486 aaKnown RBP13.95□□□□□ -0.18
Tpm1-213ENSMUST00000113697 Zc3h13E9Q784 1729 aaKnown RBP13.94□□□□□ -0.18
Tpm1-213ENSMUST00000113697 Neurod1Q60867 357 aa13.94□□□□□ -0.18
Tpm1-213ENSMUST00000113697 Nop58Q6DFW4 536 aaKnown RBP13.94□□□□□ -0.18
Tpm1-213ENSMUST00000113697 Sgip1Q8VD37 806 aa13.94□□□□□ -0.18
Tpm1-213ENSMUST00000113697 Txndc2Q6P902 515 aa13.93□□□□□ -0.18
Tpm1-213ENSMUST00000113697 Cdk13Q69ZA1 1511 aaKnown RBP13.93□□□□□ -0.18
Tpm1-213ENSMUST00000113697 Cpsf1Q9EPU4 1441 aaKnown RBP13.93□□□□□ -0.18
Tpm1-213ENSMUST00000113697 Anks4bQ8K3X6 423 aa13.93□□□□□ -0.18
Tpm1-213ENSMUST00000113697 Rims1Q99NE5 1463 aa13.92□□□□□ -0.18
Tpm1-213ENSMUST00000113697 Polr3aB2RXC6 1390 aa13.91□□□□□ -0.18
Tpm1-213ENSMUST00000113697 Arid4bA2CG63 1314 aaKnown RBP13.91□□□□□ -0.18
Tpm1-213ENSMUST00000113697 PplQ9R269 1755 aa13.91□□□□□ -0.18
Tpm1-213ENSMUST00000113697 Mug2P28666 1451 aa13.91□□□□□ -0.18
Tpm1-213ENSMUST00000113697 Fam117aQ7TNF9 451 aa13.9□□□□□ -0.18
Tpm1-213ENSMUST00000113697 Scn4aQ9ER60 1841 aa13.9□□□□□ -0.18
Tpm1-213ENSMUST00000113697 Nkx1-1G3UXB3 402 aa13.9□□□□□ -0.18
Tpm1-213ENSMUST00000113697 Cdk5rap2Q8K389 1822 aa13.89□□□□□ -0.19
Tpm1-213ENSMUST00000113697 AU022751B1B0V2 589 aa13.89□□□□□ -0.19
Tpm1-213ENSMUST00000113697 Ifit1bl1D3Z6F0 470 aa13.89□□□□□ -0.19
Tpm1-213ENSMUST00000113697 Ccdc96Q9CR92 584 aa13.89□□□□□ -0.19
Tpm1-213ENSMUST00000113697 Dip2aQ8BWT5 1523 aa13.89□□□□□ -0.19
Tpm1-213ENSMUST00000113697 Gm13695A2AK44 830 aa13.88□□□□□ -0.19
Tpm1-213ENSMUST00000113697 Psme1P97371 249 aa13.88□□□□□ -0.19
Tpm1-213ENSMUST00000113697 Gemin5Q8BX17 1502 aaKnown RBP13.88□□□□□ -0.19
Tpm1-213ENSMUST00000113697 Atp1b4Q99ME6 356 aa13.87□□□□□ -0.19
Tpm1-213ENSMUST00000113697 Rimbp3Q3V0F0 1606 aa13.87□□□□□ -0.19
Tpm1-213ENSMUST00000113697 Scaf11E9PZM7 1456 aaKnown RBP13.87□□□□□ -0.19
Tpm1-213ENSMUST00000113697 Eif2ak4Q9QZ05 1648 aa13.87□□□□□ -0.19
Tpm1-213ENSMUST00000113697 Sipa1l1Q8C0T5 1782 aa13.86□□□□□ -0.19
Tpm1-213ENSMUST00000113697 Myo3aQ8K3H5 1613 aa13.85□□□□□ -0.19
Tpm1-213ENSMUST00000113697 Arhgef28P97433 1693 aa13.85□□□□□ -0.19
Tpm1-213ENSMUST00000113697 Bcl2l13P59017 434 aa13.85□□□□□ -0.19
Tpm1-213ENSMUST00000113697 Setd1aE9PYH6 1716 aa13.85□□□□□ -0.19
Tpm1-213ENSMUST00000113697 Q8BT18 775 aa13.84□□□□□ -0.19
Tpm1-213ENSMUST00000113697 Zbtb7bQ64321 544 aa13.84□□□□□ -0.19
Tpm1-213ENSMUST00000113697 Pip4k2bQ80XI4 416 aa13.84□□□□□ -0.19
Tpm1-213ENSMUST00000113697 Gpr37l1Q99JG2 481 aa13.84□□□□□ -0.19
Tpm1-213ENSMUST00000113697 RalgapbQ8BQZ4 1484 aa13.83□□□□□ -0.2
Tpm1-213ENSMUST00000113697 Rims2Q9EQZ7 1530 aa13.83□□□□□ -0.2
Tpm1-213ENSMUST00000113697 Phlpp1Q8CHE4 1687 aa13.83□□□□□ -0.2
Tpm1-213ENSMUST00000113697 Dapk1Q80YE7 1442 aa13.83□□□□□ -0.2
Tpm1-213ENSMUST00000113697 Asxl2Q8BZ32 1370 aa13.82□□□□□ -0.2
Tpm1-213ENSMUST00000113697 MaddQ80U28 1577 aa13.82□□□□□ -0.2
Tpm1-213ENSMUST00000113697 IghaA0A0A6YXW6 389 aa13.81□□□□□ -0.2
Tpm1-213ENSMUST00000113697 Shq1Q7TMX5 569 aa13.81□□□□□ -0.2
Tpm1-213ENSMUST00000113697 Ncoa1P70365 1447 aa13.81□□□□□ -0.2
Tpm1-213ENSMUST00000113697 Q9D9H8 365 aa13.81□□□□□ -0.2
Tpm1-213ENSMUST00000113697 Srpk2O54781 681 aaKnown RBP13.8□□□□□ -0.2
Tpm1-213ENSMUST00000113697 PrimpolQ6P1E7 537 aa13.79□□□□□ -0.2
Tpm1-213ENSMUST00000113697 Ift172Q6VH22 1749 aa13.79□□□□□ -0.2
Tpm1-213ENSMUST00000113697 Gm20521D3Z5F7 333 aa13.78□□□□□ -0.2
Tpm1-213ENSMUST00000113697 Fan1Q69ZT1 1020 aa13.78□□□□□ -0.2
Tpm1-213ENSMUST00000113697 Lmtk3Q5XJV6 1424 aa13.78□□□□□ -0.2
Tpm1-213ENSMUST00000113697 Stra8P70278 393 aa13.78□□□□□ -0.2
Tpm1-213ENSMUST00000113697 PalldQ9ET54 1408 aa13.78□□□□□ -0.2
Tpm1-213ENSMUST00000113697 Ltbp4Q8K4G1 1666 aa13.77□□□□□ -0.2
Tpm1-213ENSMUST00000113697 Slc52a2Q9D8F3 450 aa13.77□□□□□ -0.21
Tpm1-213ENSMUST00000113697 DnmbpQ6TXD4 1580 aa13.77□□□□□ -0.21
Tpm1-213ENSMUST00000113697 Rundc1Q0VDN7 615 aa13.76□□□□□ -0.21
Tpm1-213ENSMUST00000113697 Cypt1Q8CH20 168 aa13.76□□□□□ -0.21
Tpm1-213ENSMUST00000113697 Slit3Q9WVB4 1523 aa13.76□□□□□ -0.21
Tpm1-213ENSMUST00000113697 Puf60Q3UEB3 564 aaKnown RBP13.75□□□□□ -0.21
Tpm1-213ENSMUST00000113697 Pdap1Q3UHX2 181 aaKnown RBP13.75□□□□□ -0.21
Tpm1-213ENSMUST00000113697 Card11Q8CIS0 1159 aa13.74□□□□□ -0.21
Tpm1-213ENSMUST00000113697 PzpQ61838 1495 aa13.74□□□□□ -0.21
Tpm1-213ENSMUST00000113697 Stk26Q99JT2 416 aa13.73□□□□□ -0.21
Tpm1-213ENSMUST00000113697 Lrrc7Q80TE7 1490 aa13.73□□□□□ -0.21
Tpm1-213ENSMUST00000113697 Nrxn3Q6P9K9 1571 aa13.72□□□□□ -0.21
Tpm1-213ENSMUST00000113697 Atad2Q8CDM1 1040 aa13.72□□□□□ -0.21
Tpm1-213ENSMUST00000113697 Rapgef3Q8VCC8 918 aa13.72□□□□□ -0.21
Tpm1-213ENSMUST00000113697 Nphp4P59240 1425 aa13.71□□□□□ -0.21
Tpm1-213ENSMUST00000113697 Med1Q925J9 1575 aa13.71□□□□□ -0.22
Tpm1-213ENSMUST00000113697 Pola1P33609 1465 aa13.7□□□□□ -0.22
Tpm1-213ENSMUST00000113697 Zbtb4Q5F293 982 aa13.7□□□□□ -0.22
Tpm1-213ENSMUST00000113697 Itsn2Q9Z0R6 1659 aa13.69□□□□□ -0.22
Tpm1-213ENSMUST00000113697 Arap3Q8R5G7 1538 aa13.69□□□□□ -0.22
Tpm1-213ENSMUST00000113697 Utp14aQ640M1 767 aaKnown RBP13.69□□□□□ -0.22
Tpm1-213ENSMUST00000113697 Usp40Q8BWR4 1235 aa13.68□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms