RNA–Protein interactions for RNA: ENSMUST00000107938.7

Shank1-203, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Shank1, Length 9,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-203ENSMUST00000107938 PhaxQ9JJT9 385 aaKnown RBP18.76■□□□□ 0.59
Shank1-203ENSMUST00000107938 Fmnl2A2APV2 1086 aa18.76■□□□□ 0.59
Shank1-203ENSMUST00000107938 Iqca1Q9CUL5 857 aa18.76■□□□□ 0.59
Shank1-203ENSMUST00000107938 Tacc1Q6Y685 774 aa18.76■□□□□ 0.59
Shank1-203ENSMUST00000107938 Hdgfl1Q2VPR5 283 aa18.76■□□□□ 0.59
Shank1-203ENSMUST00000107938 Cetn4Q8K4K1 168 aa18.76■□□□□ 0.59
Shank1-203ENSMUST00000107938 Krt82Q99M74 516 aa18.76■□□□□ 0.59
Shank1-203ENSMUST00000107938 Tubb4aQ9D6F9 444 aa18.76■□□□□ 0.59
Shank1-203ENSMUST00000107938 Gbp8Q2V6D6 525 aa18.76■□□□□ 0.59
Shank1-203ENSMUST00000107938 Ddx23D3Z0M9 819 aaKnown RBP18.75■□□□□ 0.59
Shank1-203ENSMUST00000107938 IqcgQ80W32 419 aa18.75■□□□□ 0.59
Shank1-203ENSMUST00000107938 Ccdc112A0AUP1 442 aa18.75■□□□□ 0.59
Shank1-203ENSMUST00000107938 Arhgef18Q6P9R4 1021 aa18.75■□□□□ 0.59
Shank1-203ENSMUST00000107938 Ccdc94Q9D6J3 314 aa18.75■□□□□ 0.59
Shank1-203ENSMUST00000107938 Rassf4Q8CB96 322 aa18.75■□□□□ 0.59
Shank1-203ENSMUST00000107938 Rbm25B2RY56 838 aaKnown RBP18.74■□□□□ 0.59
Shank1-203ENSMUST00000107938 Tubb6Q922F4 447 aa18.74■□□□□ 0.59
Shank1-203ENSMUST00000107938 Golga2Q921M4 999 aa18.74■□□□□ 0.59
Shank1-203ENSMUST00000107938 Cfap58B2RW38 873 aa18.73■□□□□ 0.59
Shank1-203ENSMUST00000107938 Fmnl3Q6ZPF4 1028 aa18.73■□□□□ 0.59
Shank1-203ENSMUST00000107938 Ankrd24Q80VM7 985 aa18.73■□□□□ 0.59
Shank1-203ENSMUST00000107938 NefhP19246 1090 aa18.73■□□□□ 0.59
Shank1-203ENSMUST00000107938 Ift57Q8BXG3 429 aa18.73■□□□□ 0.59
Shank1-203ENSMUST00000107938 Trim29Q8R2Q0 587 aa18.73■□□□□ 0.59
Shank1-203ENSMUST00000107938 Prkrip1Q9CWV6 186 aaKnown RBP18.72■□□□□ 0.59
Shank1-203ENSMUST00000107938 Zmat2Q9CPW7 199 aa18.72■□□□□ 0.59
Shank1-203ENSMUST00000107938 Map2k1P31938 393 aa18.71■□□□□ 0.59
Shank1-203ENSMUST00000107938 Cc2d1bQ8BRN9 848 aa18.71■□□□□ 0.59
Shank1-203ENSMUST00000107938 Smc3Q9CW03 1217 aaKnown RBP18.71■□□□□ 0.59
Shank1-203ENSMUST00000107938 Kiaa1211Q5PR69 1207 aa18.71■□□□□ 0.59
Shank1-203ENSMUST00000107938 Gbp2Q9Z0E6 589 aa18.71■□□□□ 0.59
Shank1-203ENSMUST00000107938 Cluap1Q8R3P7 413 aa18.71■□□□□ 0.58
Shank1-203ENSMUST00000107938 Exoc8Q6PGF7 716 aa18.7■□□□□ 0.58
Shank1-203ENSMUST00000107938 SelenooQ9DBC0 667 aa18.7■□□□□ 0.58
Shank1-203ENSMUST00000107938 Ercc6lQ8BHK9 1240 aa18.7■□□□□ 0.58
Shank1-203ENSMUST00000107938 AnlnQ8K298 1121 aaKnown RBP18.7■□□□□ 0.58
Shank1-203ENSMUST00000107938 A0A0U1RNP2 1173 aa18.7■□□□□ 0.58
Shank1-203ENSMUST00000107938 Rfc1P35601 1131 aa18.7■□□□□ 0.58
Shank1-203ENSMUST00000107938 Rnf168Q80XJ2 565 aa18.7■□□□□ 0.58
Shank1-203ENSMUST00000107938 Ccdc70Q9D9B0 223 aa18.69■□□□□ 0.58
Shank1-203ENSMUST00000107938 Rock1P70335 1354 aa18.69■□□□□ 0.58
Shank1-203ENSMUST00000107938 Paxbp1P58501 919 aa18.69■□□□□ 0.58
Shank1-203ENSMUST00000107938 Lrrc45Q8CIM1 670 aa18.69■□□□□ 0.58
Shank1-203ENSMUST00000107938 Kiaa1328Q6NZK5 612 aa18.68■□□□□ 0.58
Shank1-203ENSMUST00000107938 Zkscan1Q8BGS3 561 aaKnown RBP18.68■□□□□ 0.58
Shank1-203ENSMUST00000107938 Odf2lQ9D478 642 aa18.68■□□□□ 0.58
Shank1-203ENSMUST00000107938 Brpf1B2RRD7 1212 aa18.68■□□□□ 0.58
Shank1-203ENSMUST00000107938 Basp1Q91XV3 226 aa18.68■□□□□ 0.58
Shank1-203ENSMUST00000107938 Stim1P70302 685 aa18.68■□□□□ 0.58
Shank1-203ENSMUST00000107938 Kcnj4P52189 445 aa18.68■□□□□ 0.58
Shank1-203ENSMUST00000107938 Chmp3Q9CQ10 224 aa18.68■□□□□ 0.58
Shank1-203ENSMUST00000107938 Cux2P70298 1426 aa18.68■□□□□ 0.58
Shank1-203ENSMUST00000107938 Speer4f1Q9D5Q6 258 aa18.67■□□□□ 0.58
Shank1-203ENSMUST00000107938 Sass6Q80UK7 654 aa18.67■□□□□ 0.58
Shank1-203ENSMUST00000107938 Lrrcc1Q69ZB0 1026 aa18.67■□□□□ 0.58
Shank1-203ENSMUST00000107938 Skor1Q8BX46 964 aa18.67■□□□□ 0.58
Shank1-203ENSMUST00000107938 Dync1i1O88485 628 aa18.67■□□□□ 0.58
Shank1-203ENSMUST00000107938 Efcc1Q9JJF6 558 aa18.67■□□□□ 0.58
Shank1-203ENSMUST00000107938 Ccdc96Q9CR92 584 aa18.66■□□□□ 0.58
Shank1-203ENSMUST00000107938 Plekhh1Q80TI1 1356 aa18.66■□□□□ 0.58
Shank1-203ENSMUST00000107938 Mcm2P97310 904 aa18.66■□□□□ 0.58
Shank1-203ENSMUST00000107938 Trim30cD3YVI9 513 aa18.66■□□□□ 0.58
Shank1-203ENSMUST00000107938 Arhgap35Q91YM2 1499 aa18.66■□□□□ 0.58
Shank1-203ENSMUST00000107938 Cfap99A0A140LIX9 648 aa18.66■□□□□ 0.58
Shank1-203ENSMUST00000107938 Tubb5P99024 444 aaKnown RBP18.65■□□□□ 0.58
Shank1-203ENSMUST00000107938 Mcm5P49718 733 aa18.65■□□□□ 0.58
Shank1-203ENSMUST00000107938 CactinQ9CS00 772 aaKnown RBP18.65■□□□□ 0.58
Shank1-203ENSMUST00000107938 Psma5Q9Z2U1 241 aaKnown RBP18.65■□□□□ 0.58
Shank1-203ENSMUST00000107938 Maats1Q8BRC6 783 aa18.65■□□□□ 0.58
Shank1-203ENSMUST00000107938 Synpo2Q91YE8 1087 aaKnown RBP18.65■□□□□ 0.58
Shank1-203ENSMUST00000107938 Trerf1Q8BXJ2 1205 aa18.64■□□□□ 0.57
Shank1-203ENSMUST00000107938 Kif5bQ61768 963 aa18.64■□□□□ 0.57
Shank1-203ENSMUST00000107938 Rbbp5Q8BX09 538 aaKnown RBP18.64■□□□□ 0.57
Shank1-203ENSMUST00000107938 Ccdc186Q8C9S4 917 aa18.64■□□□□ 0.57
Shank1-203ENSMUST00000107938 Myh10Q61879 1976 aaKnown RBP18.64■□□□□ 0.57
Shank1-203ENSMUST00000107938 Ccdc146E9Q9F7 977 aa18.63■□□□□ 0.57
Shank1-203ENSMUST00000107938 Eif2s2Q99L45 331 aaKnown RBP18.63■□□□□ 0.57
Shank1-203ENSMUST00000107938 Rfx1P48377 963 aa18.63■□□□□ 0.57
Shank1-203ENSMUST00000107938 Tex13c2A0A0G2JGA3 530 aa18.63■□□□□ 0.57
Shank1-203ENSMUST00000107938 Stmn4P63042 189 aa18.63■□□□□ 0.57
Shank1-203ENSMUST00000107938 Zhx1P70121 873 aa18.63■□□□□ 0.57
Shank1-203ENSMUST00000107938 Tspyl3Q3UYP3 334 aa18.62■□□□□ 0.57
Shank1-203ENSMUST00000107938 Ccdc42Q5SV66 316 aa18.62■□□□□ 0.57
Shank1-203ENSMUST00000107938 Ercc3P49135 783 aa18.62■□□□□ 0.57
Shank1-203ENSMUST00000107938 Mroh3A0A1D5RM54 893 aa18.62■□□□□ 0.57
Shank1-203ENSMUST00000107938 Ccdc114Q3UX62 658 aa18.62■□□□□ 0.57
Shank1-203ENSMUST00000107938 Ints3Q7TPD0 1041 aaKnown RBP18.62■□□□□ 0.57
Shank1-203ENSMUST00000107938 Rimbp2Q80U40 1072 aa18.62■□□□□ 0.57
Shank1-203ENSMUST00000107938 Hmgb3O54879 200 aaKnown RBP18.62■□□□□ 0.57
Shank1-203ENSMUST00000107938 Klhl10Q9D5V2 608 aa18.62■□□□□ 0.57
Shank1-203ENSMUST00000107938 Armc9Q9D2I5 817 aa18.61■□□□□ 0.57
Shank1-203ENSMUST00000107938 Chic2Q9D9G3 165 aa18.61■□□□□ 0.57
Shank1-203ENSMUST00000107938 Ciz1Q8VEH2 845 aa18.61■□□□□ 0.57
Shank1-203ENSMUST00000107938 Smarcc1P97496 1104 aa18.61■□□□□ 0.57
Shank1-203ENSMUST00000107938 Myo6Q64331 1265 aa18.61■□□□□ 0.57
Shank1-203ENSMUST00000107938 Erich4Q3UNU4 136 aa18.61■□□□□ 0.57
Shank1-203ENSMUST00000107938 Baz1bQ9Z277 1479 aa18.6■□□□□ 0.57
Shank1-203ENSMUST00000107938 Ift74Q8BKE9 600 aa18.6■□□□□ 0.57
Shank1-203ENSMUST00000107938 Erc1Q99MI1 1120 aa18.6■□□□□ 0.57
Shank1-203ENSMUST00000107938 Fam114a1Q9D281 569 aa18.6■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 9.9 ms