RNA–Protein interactions for RNA: ENSMUST00000105235.9

Smarcc2-203, Transcript of SWI/SNF complex subunit SMARCC2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc2, Length 4,032 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2-203ENSMUST00000105235 Usp40Q8BWR4 1235 aa12.45□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Chmp4bQ9D8B3 224 aaKnown RBP12.45□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Igf1rQ60751 1373 aa12.45□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Samd1D3YXK1 519 aa12.44□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Gm156Q58A37 223 aa12.44□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Zcchc11B2RX14 1644 aaKnown RBP12.44□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Tarbp1E9Q368 1579 aa12.44□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Tspyl2Q7TQI8 677 aa12.44□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Eif4g3Q80XI3 1579 aaKnown RBP12.43□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Ppp2r1aQ76MZ3 589 aa12.43□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 ErbinQ80TH2 1402 aa12.43□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 4933402E13RikQ9D4D2 429 aa12.43□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 CgnP59242 1191 aa12.43□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Ralbp1Q62172 648 aa12.43□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Nectin2P32507 530 aa12.42□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Paxip1Q6NZQ4 1056 aa12.42□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 HnrnpuQ8VEK3 800 aaKnown RBP12.42□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 GsdmaQ9EST1 446 aa12.42□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Rbm10Q99KG3 930 aaKnown RBP12.42□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Edc4Q3UJB9 1406 aaKnown RBP12.42□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Becn1O88597 448 aa12.41□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Ush1cQ9ES64 910 aa12.41□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Ubap1lG3UW59 384 aa12.41□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Cc2d1aQ8K1A6 943 aa12.41□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Fbxo2Q80UW2 297 aa12.41□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Ttc21bQ0HA38 1315 aa12.41□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Rnf214Q8BFU3 668 aaKnown RBP12.4□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Gm32742A0A1B0GT42 1604 aa12.4□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Plekhh1Q80TI1 1356 aa12.4□□□□□ -0.42
Smarcc2-203ENSMUST00000105235 Kiaa0754Q69ZZ9 979 aa12.4□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Ppip5k1A2ARP1 1436 aa12.39□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Kank1E9Q238 1360 aa12.39□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 MccE9PWI3 1003 aa12.39□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Tnnt1O88346 262 aa12.39□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Apaf1O88879 1249 aa12.39□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Stard8Q8K031 1019 aa12.39□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Rnf17Q99MV7 1640 aa12.39□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Znf608Q56A10 1511 aa12.39□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Erbb3Q61526 1339 aa12.38□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 G3bp1P97855 465 aaKnown RBP12.38□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Ssh1Q76I79 1042 aa12.38□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Safb2Q80YR5 991 aaKnown RBP12.38□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Rab3gap2Q8BMG7 1366 aa12.37□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Gtf2a1Q99PM3 378 aa12.37□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Casq1O09165 405 aa12.37□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Mast1Q9R1L5 1570 aa12.37□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Ppp2r3aB2RXC8 1150 aa12.37□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Nol12Q8BG17 217 aa12.37□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Rrp9Q91WM3 475 aaKnown RBP12.36□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Puf60Q3UEB3 564 aaKnown RBP12.36□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 CrebrfQ8CDG5 640 aaKnown RBP12.36□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Kdm5cP41230 1554 aa12.35□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Gapvd1Q6PAR5 1458 aa12.35□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Nek4Q9Z1J2 792 aa12.35□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Iqgap1Q9JKF1 1657 aaKnown RBP12.35□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Abcc3B2RX12 1523 aa12.34□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Abcc6Q9R1S7 1498 aa12.34□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 PtmsQ9D0J8 101 aaKnown RBP12.34□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Sptbn5F6UCX4 1208 aa12.34□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 MyclP10166 368 aa12.34□□□□□ -0.43
Smarcc2-203ENSMUST00000105235 Triml2E9PW10 424 aa12.33□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Trim30aP15533 496 aa12.33□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Pes1Q9EQ61 584 aaKnown RBP12.33□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Usp54Q8BL06 1588 aaKnown RBP12.33□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Zmym4A2A791 1549 aaKnown RBP12.33□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Adam1bQ8R534 806 aa12.33□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Phf14Q9D4H9 881 aa12.33□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Phactr2B1AVP0 632 aa12.32□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Eif4g2Q62448 906 aaKnown RBP12.32□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Cog6Q8R3I3 657 aa12.32□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Atl3Q91YH5 541 aa12.32□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Neurl4Q5NCX5 1563 aa12.32□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 NhsB1AV60 1647 aa12.32□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Adamts13Q769J6 1426 aa12.32□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Q3TQI7 289 aaKnown RBP12.31□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Sbno1Q689Z5 1390 aa12.31□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Tulp4Q9JIL5 1547 aa12.31□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 PogkQ80TC5 607 aa12.3□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Smc5Q8CG46 1101 aaKnown RBP12.3□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Brpf1B2RRD7 1212 aa12.3□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Polr3gQ6NXY9 223 aa12.3□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Rassf8Q8CJ96 419 aa12.3□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Rtf1A2AQ19 715 aaKnown RBP12.29□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Q9D2X8 372 aa12.29□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Cep170Q6A065 1588 aa12.29□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Kif1bQ60575 1816 aaKnown RBP12.29□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Sh3bp5Q9Z131 463 aa12.29□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Cdc42bpbQ7TT50 1713 aa12.29□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Utp3Q9JI13 469 aaKnown RBP12.29□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 PtprtQ99M80 1454 aa12.29□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Iffo2Q8R2V2 512 aa12.28□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Atxn3Q9CVD2 355 aa12.28□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Gm16486A0A1D5RMD1 1434 aa12.28□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Abca8bQ8K440 1620 aa12.28□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Pdia4P08003 638 aaKnown RBP12.27□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Filip1lQ6P6L0 1131 aa12.27□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Tomm22Q9CPQ3 142 aa12.27□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Gm973E9Q295 1059 aa12.27□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Mcm4P49717 862 aa12.27□□□□□ -0.44
Smarcc2-203ENSMUST00000105235 Ppp1r9bQ6R891 817 aaKnown RBP12.27□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 38.4 ms