RNA–Protein interactions for RNA: ENSMUST00000099712.9

Ambra1-203, Transcript of Activating molecule in BECN1-regulated autophagy protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ambra1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ambra1-203ENSMUST00000099712 Fam43aQ8BUP8 424 aa13.99□□□□□ -0.17
Ambra1-203ENSMUST00000099712 Fam193aQ8CGI1 1231 aaKnown RBP13.99□□□□□ -0.17
Ambra1-203ENSMUST00000099712 ScribQ80U72 1612 aa13.99□□□□□ -0.17
Ambra1-203ENSMUST00000099712 Cbx1P83917 185 aaKnown RBP13.98□□□□□ -0.17
Ambra1-203ENSMUST00000099712 Rec8Q8C5S7 591 aa13.98□□□□□ -0.17
Ambra1-203ENSMUST00000099712 Cux1P53564 1515 aa13.98□□□□□ -0.17
Ambra1-203ENSMUST00000099712 Myom3A2ABU4 1439 aa13.98□□□□□ -0.17
Ambra1-203ENSMUST00000099712 Dusp27Q148W8 1138 aa13.97□□□□□ -0.17
Ambra1-203ENSMUST00000099712 Ccdc34Q3UI66 367 aa13.97□□□□□ -0.17
Ambra1-203ENSMUST00000099712 Shroom4Q1W617 1475 aa13.97□□□□□ -0.17
Ambra1-203ENSMUST00000099712 Ints3Q7TPD0 1041 aaKnown RBP13.97□□□□□ -0.17
Ambra1-203ENSMUST00000099712 NaspQ99MD9 773 aaKnown RBP13.97□□□□□ -0.17
Ambra1-203ENSMUST00000099712 Puf60Q3UEB3 564 aaKnown RBP13.97□□□□□ -0.17
Ambra1-203ENSMUST00000099712 Rnf20Q5DTM8 973 aa13.97□□□□□ -0.17
Ambra1-203ENSMUST00000099712 Ddx11Q6AXC6 880 aa13.97□□□□□ -0.17
Ambra1-203ENSMUST00000099712 Ciz1Q8VEH2 845 aa13.97□□□□□ -0.17
Ambra1-203ENSMUST00000099712 CastP51125 788 aa13.96□□□□□ -0.17
Ambra1-203ENSMUST00000099712 Tpm1P58771 284 aa13.96□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Gpatch3Q8BIY1 525 aa13.96□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Cplx1P63040 134 aa13.96□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Znhit6Q3UFB2 460 aaKnown RBP13.96□□□□□ -0.18
Ambra1-203ENSMUST00000099712 NexnQ7TPW1 607 aa13.95□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Znf771Q8BJ90 317 aa13.95□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Jakmip1Q8BVL9 626 aa13.95□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Zkscan2G3X952 960 aa13.95□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Mcm2P97310 904 aa13.95□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Cavin4A2AMM0 362 aa13.95□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Pde4cQ3UEI1 686 aa13.95□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Ftsj3Q9DBE9 838 aaKnown RBP13.95□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Ccdc171E9Q1U1 1324 aa13.95□□□□□ -0.18
Ambra1-203ENSMUST00000099712 PdcQ9QW08 244 aa13.94□□□□□ -0.18
Ambra1-203ENSMUST00000099712 PrxO55103 1391 aa13.94□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Cfdp1O88271 295 aaKnown RBP13.94□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Sv2bQ8BG39 683 aa13.94□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Egfem1Q8C088 590 aa13.94□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Smarca4Q3TKT4 1613 aaKnown RBP13.94□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Neurod6P48986 337 aa13.94□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Cpa2Q504N0 417 aa13.94□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Mns1Q61884 491 aa13.94□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Srek1Q8BZX4 494 aaKnown RBP13.94□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Ubxn4Q8VCH8 506 aa13.93□□□□□ -0.18
Ambra1-203ENSMUST00000099712 ErbinQ80TH2 1402 aa13.93□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Cnnm3Q32NY4 713 aa13.93□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Erc2Q6PH08 957 aa13.93□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Maco1Q7TQE6 664 aaKnown RBP13.93□□□□□ -0.18
Ambra1-203ENSMUST00000099712 AnlnQ8K298 1121 aaKnown RBP13.93□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Gm21969J3QJZ1 289 aa13.92□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Nop14Q8R3N1 860 aaKnown RBP13.92□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Atxn3Q9CVD2 355 aa13.92□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Cchcr1Q8K2I2 770 aa13.92□□□□□ -0.18
Ambra1-203ENSMUST00000099712 NcapgE9PWG6 1004 aa13.92□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Efcab5A0JP43 1406 aa13.92□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Cplx2P84086 134 aa13.91□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Samm50Q8BGH2 469 aa13.91□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Mrvi1Q9WUX5 899 aaKnown RBP13.9□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Tiam1Q60610 1591 aa13.9□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Ppip5k2Q6ZQB6 1129 aa13.9□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Soga1E1U8D0 1418 aa13.9□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Ppp1r18Q8BQ30 594 aa13.9□□□□□ -0.18
Ambra1-203ENSMUST00000099712 CarsQ9ER72 831 aaKnown RBP13.9□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Cd109Q8R422 1442 aa13.9□□□□□ -0.18
Ambra1-203ENSMUST00000099712 Q4VA45 678 aa13.9□□□□□ -0.18
Ambra1-203ENSMUST00000099712 PtprkP35822 1457 aa13.89□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Krt82Q99M74 516 aa13.89□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Gcc1Q9D4H2 778 aa13.89□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Ccdc47Q9D024 483 aaKnown RBP13.89□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Gsto1O09131 240 aa13.89□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Bcl2l13P59017 434 aa13.89□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Q8C5K5 320 aa13.89□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Q9D9S1 216 aa13.89□□□□□ -0.19
Ambra1-203ENSMUST00000099712 TnmdQ9EP64 317 aa13.89□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Rcan3Q9JKK0 239 aa13.89□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Ncoa1P70365 1447 aa13.88□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Kank1E9Q238 1360 aa13.88□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Atad2bE9Q166 1460 aaKnown RBP13.88□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Gm21190A0A0G2JGJ6 266 aa13.88□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Mctp1E9PV86 951 aa13.88□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Tmco3Q8BH01 678 aa13.88□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Ipo7Q9EPL8 1038 aaKnown RBP13.88□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Terf2O35144 541 aa13.87□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Phldb1Q6PDH0 1371 aaKnown RBP13.87□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Nphp1Q9QY53 687 aa13.87□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Rad54l2Q99NG0 1466 aa13.87□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Ap3b2Q9JME5 1082 aa13.87□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Ift57Q8BXG3 429 aa13.86□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Cwc15Q9JHS9 229 aaKnown RBP13.86□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Nsd2Q8BVE8 1365 aa13.86□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Rab11fip3Q8CHD8 1047 aa13.86□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Cfap99A0A140LIX9 648 aa13.86□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Gcom1E9PZ54 550 aa13.86□□□□□ -0.19
Ambra1-203ENSMUST00000099712 MyzapQ3UIJ9 466 aa13.86□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Atp2b2Q9R0K7 1198 aa13.86□□□□□ -0.19
Ambra1-203ENSMUST00000099712 NefhP19246 1090 aa13.85□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Tmc1Q8R4P5 757 aa13.85□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Psma5Q9Z2U1 241 aaKnown RBP13.85□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Mcm3P25206 812 aaKnown RBP13.84□□□□□ -0.19
Ambra1-203ENSMUST00000099712 PhaxQ9JJT9 385 aaKnown RBP13.84□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Cabp2Q9JLK4 216 aa13.84□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Naip2Q9QUK4 1447 aa13.84□□□□□ -0.19
Ambra1-203ENSMUST00000099712 Naip5Q9R016 1403 aa13.84□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 45.7 ms