RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Wdr78E9PYY5 807 aa12.58□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Gm7298A0A0N4SVU1 1476 aa12.58□□□□□ -0.4
Scn8a-201ENSMUST00000082209 AppP12023 770 aa12.58□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Kif21aQ9QXL2 1672 aa12.58□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Ppp2r3aB2RXC8 1150 aa12.58□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Rrp9Q91WM3 475 aaKnown RBP12.58□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Phf14Q9D4H9 881 aa12.58□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Cd109Q8R422 1442 aa12.57□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Pcf11G3X9Z4 1553 aa12.57□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Hmgb2P30681 210 aaKnown RBP12.57□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Bicd2Q921C5 820 aa12.57□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Pip4k2aO70172 405 aa12.57□□□□□ -0.4
Scn8a-201ENSMUST00000082209 ChgaP26339 463 aaKnown RBP12.57□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Nolc1E9Q5C9 702 aaKnown RBP12.57□□□□□ -0.4
Scn8a-201ENSMUST00000082209 SynmQ70IV5 1561 aa12.57□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Cavin4A2AMM0 362 aa12.56□□□□□ -0.4
Scn8a-201ENSMUST00000082209 CalrP14211 416 aaKnown RBP12.56□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Plekhg5Q66T02 1073 aa12.56□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Ccdc183A2AJB1 534 aa12.56□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Zkscan2G3X952 960 aa12.56□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Lamc3Q9R0B6 1581 aa12.55□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Ggt6Q6PDE7 497 aa12.55□□□□□ -0.4
Scn8a-201ENSMUST00000082209 HmmrQ00547 794 aaKnown RBP12.55□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Nop14Q8R3N1 860 aaKnown RBP12.55□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Luc7lQ9CYI4 371 aaKnown RBP12.55□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Camsap2Q8C1B1 1461 aa12.54□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Ric3Q8BPM6 367 aa12.54□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Zkscan1Q8BGS3 561 aaKnown RBP12.54□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Sv2bQ8BG39 683 aa12.54□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Tdrd9Q14BI7 1383 aa12.54□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Cfap99A0A140LIX9 648 aa12.54□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Vps53Q8CCB4 832 aa12.53□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Plcd4Q8K3R3 807 aa12.53□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Cyp46a1Q9WVK8 500 aa12.53□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Sox12Q04890 314 aa12.53□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Fam184aE9PW83 1143 aa12.53□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Jph4Q80WT0 628 aa12.53□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Usp16Q99LG0 825 aa12.52□□□□□ -0.4
Scn8a-201ENSMUST00000082209 Arap1Q4LDD4 1452 aa12.52□□□□□ -0.4
Scn8a-201ENSMUST00000082209 EprsQ8CGC7 1512 aaKnown RBP12.52□□□□□ -0.41
Scn8a-201ENSMUST00000082209 CrcpO35427 148 aa12.52□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Ppp4r3bQ922R5 820 aa12.52□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Shq1Q7TMX5 569 aa12.51□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Rhot2Q8JZN7 620 aa12.51□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Sos1Q62245 1319 aa12.51□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Phldb2Q8K1N2 1249 aa12.51□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Med4Q9CQA5 270 aa12.51□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Ercc6lQ8BHK9 1240 aa12.51□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Fez1Q8K0X8 392 aa12.51□□□□□ -0.41
Scn8a-201ENSMUST00000082209 TxlnbQ8VBT1 685 aa12.51□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Noc3lQ8VI84 807 aaKnown RBP12.51□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Cavin1O54724 392 aa12.51□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Rbm25B2RY56 838 aaKnown RBP12.51□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Fchsd2Q3USJ8 740 aa12.5□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Ppip5k1A2ARP1 1436 aa12.5□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Ccdc43Q9CR29 222 aaKnown RBP12.5□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Pak3Q61036 559 aa12.5□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Znf710Q3U288 666 aa12.5□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Esx1O88933 382 aa12.5□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Rapgef6Q5NCJ1 1609 aa12.49□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Gimap6Q8K349 305 aa12.49□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Dnaaf4Q8R368 420 aa12.49□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Kif20aP97329 887 aa12.49□□□□□ -0.41
Scn8a-201ENSMUST00000082209 PsapQ61207 557 aaKnown RBP12.49□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Hs1bp3Q3TC93 395 aa12.49□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Cep112Q5PR68 954 aa12.48□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Ttll13A4Q9F6 804 aa12.48□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Rfx1P48377 963 aa12.48□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Dixdc1Q80Y83 711 aa12.48□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Eif2s2Q99L45 331 aaKnown RBP12.48□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Erich3F6QRE9 1637 aa12.48□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Prl7d1P04769 244 aa12.48□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Kiaa0753Q6A000 959 aa12.48□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Nat10Q8K224 1024 aaKnown RBP12.48□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Eif4g1Q6NZJ6 1600 aaKnown RBP12.47□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Ttll5Q8CHB8 1328 aa12.47□□□□□ -0.41
Scn8a-201ENSMUST00000082209 NexmifQ5DTT1 1515 aa12.47□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Pibf1E9Q6K3 756 aa12.47□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Tomm22Q9CPQ3 142 aa12.47□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Gnai2P08752 355 aaKnown RBP12.47□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Phactr2B1AVP0 632 aa12.47□□□□□ -0.41
Scn8a-201ENSMUST00000082209 SrrtQ99MR6 875 aaKnown RBP12.47□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Odf2lQ9D478 642 aa12.47□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Gm21190A0A0G2JGJ6 266 aa12.47□□□□□ -0.41
Scn8a-201ENSMUST00000082209 KarsQ99MN1 595 aaKnown RBP12.47□□□□□ -0.41
Scn8a-201ENSMUST00000082209 HypkQ9CR41 129 aa12.47□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Fyb1O35601 819 aa12.46□□□□□ -0.41
Scn8a-201ENSMUST00000082209 IbtkQ6ZPR6 1352 aaKnown RBP12.46□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Rpgrip1lQ8CG73 1264 aa12.46□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Caskin1Q6P9K8 1431 aa12.46□□□□□ -0.41
Scn8a-201ENSMUST00000082209 March6Q6ZQ89 909 aa12.46□□□□□ -0.41
Scn8a-201ENSMUST00000082209 Cdkl5Q3UTQ8 938 aa12.46□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Q8C5K5 320 aa12.46□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Fam163aQ8CAA5 168 aa12.46□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Q9D2X8 372 aa12.46□□□□□ -0.42
Scn8a-201ENSMUST00000082209 PogzQ8BZH4 1409 aaKnown RBP12.46□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Pnmal2G3X9N3 661 aa12.46□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Washc2Q6PGL7 1334 aa12.45□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Erlin2Q8BFZ9 340 aa12.45□□□□□ -0.42
Scn8a-201ENSMUST00000082209 Mrc2Q64449 1479 aa12.45□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 46.9 ms