RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Ofd1Q80Z25 1017 aa15.16■□□□□ 0.02
Vamp1-202ENSMUST00000063588 Mak16Q8BGS0 296 aaKnown RBP15.16■□□□□ 0.02
Vamp1-202ENSMUST00000063588 Q7TT23 1179 aa15.15■□□□□ 0.02
Vamp1-202ENSMUST00000063588 Abca14E9Q8F8 1683 aa15.15■□□□□ 0.02
Vamp1-202ENSMUST00000063588 Kif7B7ZNG0 1348 aa15.14■□□□□ 0.01
Vamp1-202ENSMUST00000063588 Nrxn1Q9CS84 1514 aa15.13■□□□□ 0.01
Vamp1-202ENSMUST00000063588 Cep170bQ80U49 1574 aa15.13■□□□□ 0.01
Vamp1-202ENSMUST00000063588 DiexfQ8BTT6 772 aaKnown RBP15.12■□□□□ 0.01
Vamp1-202ENSMUST00000063588 Atp1b4Q99ME6 356 aa15.12■□□□□ 0.01
Vamp1-202ENSMUST00000063588 Dcaf11Q91VU6 549 aa15.11■□□□□ 0.01
Vamp1-202ENSMUST00000063588 Nwd1A6H603 1563 aa15.1■□□□□ 0.01
Vamp1-202ENSMUST00000063588 Rtl5Q5DTT4 599 aa15.09■□□□□ 0.01
Vamp1-202ENSMUST00000063588 Q9D9H8 365 aa15.09■□□□□ 0.01
Vamp1-202ENSMUST00000063588 Dip2bQ3UH60 1574 aa15.09■□□□□ 0.01
Vamp1-202ENSMUST00000063588 Calr4Q3TQS0 420 aa15.09■□□□□ 0.01
Vamp1-202ENSMUST00000063588 Stk26Q99JT2 416 aa15.09■□□□□ 0.01
Vamp1-202ENSMUST00000063588 NktrP30415 1453 aa15.08■□□□□ 0
Vamp1-202ENSMUST00000063588 Slit3Q9WVB4 1523 aa15.08■□□□□ 0
Vamp1-202ENSMUST00000063588 Utp14aQ640M1 767 aaKnown RBP15.08■□□□□ 0
Vamp1-202ENSMUST00000063588 Dnajc5gQ8C632 165 aa15.08■□□□□ 0
Vamp1-202ENSMUST00000063588 Adgrl1Q80TR1 1466 aa15.07■□□□□ 0
Vamp1-202ENSMUST00000063588 Cps1Q8C196 1500 aa15.05■□□□□ -0
Vamp1-202ENSMUST00000063588 Upf2A2AT37 1269 aaKnown RBP15.05■□□□□ -0
Vamp1-202ENSMUST00000063588 Gsto1O09131 240 aa15.05■□□□□ -0
Vamp1-202ENSMUST00000063588 Tnrc6bQ8BKI2 1810 aaKnown RBP15.05■□□□□ -0
Vamp1-202ENSMUST00000063588 Arap3Q8R5G7 1538 aa15.04■□□□□ -0
Vamp1-202ENSMUST00000063588 Scaf11E9PZM7 1456 aaKnown RBP15.04■□□□□ -0
Vamp1-202ENSMUST00000063588 Lmtk3Q5XJV6 1424 aa15.04■□□□□ -0
Vamp1-202ENSMUST00000063588 Kank1E9Q238 1360 aa15.04■□□□□ -0
Vamp1-202ENSMUST00000063588 FanciQ8K368 1330 aa15.04■□□□□ -0
Vamp1-202ENSMUST00000063588 Cnga1P29974 684 aa15.04■□□□□ -0
Vamp1-202ENSMUST00000063588 Psme1P97371 249 aa15.04■□□□□ -0
Vamp1-202ENSMUST00000063588 Safb2Q80YR5 991 aaKnown RBP15.04■□□□□ -0
Vamp1-202ENSMUST00000063588 P3h3Q8CG70 732 aa15.04■□□□□ -0
Vamp1-202ENSMUST00000063588 Exosc9Q9JHI7 438 aaKnown RBP15.04■□□□□ -0
Vamp1-202ENSMUST00000063588 Mink1Q9JM52 1308 aa15.03■□□□□ -0
Vamp1-202ENSMUST00000063588 Eif5bQ05D44 1216 aaKnown RBP15.03■□□□□ -0
Vamp1-202ENSMUST00000063588 Nlrp6Q91WS2 869 aa15.03■□□□□ -0
Vamp1-202ENSMUST00000063588 Atp2b2Q9R0K7 1198 aa15.03■□□□□ -0
Vamp1-202ENSMUST00000063588 Bcl9Q9D219 1425 aa15.03■□□□□ -0
Vamp1-202ENSMUST00000063588 Zfp444Q3TDV8 331 aaKnown RBP15.02■□□□□ -0
Vamp1-202ENSMUST00000063588 Txndc2Q6P902 515 aa15.02■□□□□ -0
Vamp1-202ENSMUST00000063588 Pik3r4Q8VD65 1358 aa15.02□□□□□ -0.01
Vamp1-202ENSMUST00000063588 Cald1E9QA15 768 aaKnown RBP15□□□□□ -0.01
Vamp1-202ENSMUST00000063588 Cdk19Q8BWD8 501 aa15□□□□□ -0.01
Vamp1-202ENSMUST00000063588 PzpQ61838 1495 aa15□□□□□ -0.01
Vamp1-202ENSMUST00000063588 Ttc41Q692V3 1318 aa15□□□□□ -0.01
Vamp1-202ENSMUST00000063588 Esx1O88933 382 aa15□□□□□ -0.01
Vamp1-202ENSMUST00000063588 IbtkQ6ZPR6 1352 aaKnown RBP14.99□□□□□ -0.01
Vamp1-202ENSMUST00000063588 Usp32F8VPZ3 1604 aa14.98□□□□□ -0.01
Vamp1-202ENSMUST00000063588 L3mbtl2P59178 703 aa14.98□□□□□ -0.01
Vamp1-202ENSMUST00000063588 Kiaa1107Q80TK0 1369 aa14.97□□□□□ -0.01
Vamp1-202ENSMUST00000063588 Kif1aP33173 1695 aa14.96□□□□□ -0.01
Vamp1-202ENSMUST00000063588 Kif20bQ80WE4 1774 aaKnown RBP14.96□□□□□ -0.02
Vamp1-202ENSMUST00000063588 Kif16bB1AVY7 1312 aa14.96□□□□□ -0.02
Vamp1-202ENSMUST00000063588 Pik3c2bE9QAN8 1632 aa14.95□□□□□ -0.02
Vamp1-202ENSMUST00000063588 Map4k4P97820 1233 aaKnown RBP14.95□□□□□ -0.02
Vamp1-202ENSMUST00000063588 Usp19Q3UJD6 1360 aa14.95□□□□□ -0.02
Vamp1-202ENSMUST00000063588 Rreb1Q3UH06 1700 aaKnown RBP14.95□□□□□ -0.02
Vamp1-202ENSMUST00000063588 Asxl2Q8BZ32 1370 aa14.94□□□□□ -0.02
Vamp1-202ENSMUST00000063588 Sirt1Q923E4 737 aa14.94□□□□□ -0.02
Vamp1-202ENSMUST00000063588 SafbD3YXK2 937 aaKnown RBP14.93□□□□□ -0.02
Vamp1-202ENSMUST00000063588 Ncbp3Q8BZR9 615 aaKnown RBP14.93□□□□□ -0.02
Vamp1-202ENSMUST00000063588 PtpruB1AUH1 1446 aa14.93□□□□□ -0.02
Vamp1-202ENSMUST00000063588 Golga2Q921M4 999 aa14.92□□□□□ -0.02
Vamp1-202ENSMUST00000063588 GsdmaQ9EST1 446 aa14.92□□□□□ -0.02
Vamp1-202ENSMUST00000063588 Rims2Q9EQZ7 1530 aa14.92□□□□□ -0.02
Vamp1-202ENSMUST00000063588 D430041D05RikF6ZGR6 1678 aa14.92□□□□□ -0.02
Vamp1-202ENSMUST00000063588 N4bp2F8VQG7 1678 aaKnown RBP14.92□□□□□ -0.02
Vamp1-202ENSMUST00000063588 Chd4Q6PDQ2 1915 aaKnown RBP14.92□□□□□ -0.02
Vamp1-202ENSMUST00000063588 NinlQ6ZQ12 1394 aa14.92□□□□□ -0.02
Vamp1-202ENSMUST00000063588 4930407I10RikD3Z5T8 1512 aa14.92□□□□□ -0.02
Vamp1-202ENSMUST00000063588 IghaA0A0A6YXW6 389 aa14.92□□□□□ -0.02
Vamp1-202ENSMUST00000063588 Map3k19E9Q3S4 1311 aa14.91□□□□□ -0.02
Vamp1-202ENSMUST00000063588 Uspl1Q3ULM6 1089 aa14.91□□□□□ -0.02
Vamp1-202ENSMUST00000063588 Idi2Q8BFZ6 227 aa14.91□□□□□ -0.02
Vamp1-202ENSMUST00000063588 Erbb3Q61526 1339 aa14.9□□□□□ -0.02
Vamp1-202ENSMUST00000063588 Rad21Q61550 635 aaKnown RBP14.9□□□□□ -0.02
Vamp1-202ENSMUST00000063588 Ralbp1Q62172 648 aa14.9□□□□□ -0.02
Vamp1-202ENSMUST00000063588 Iqsec2Q5DU25 1478 aa14.9□□□□□ -0.02
Vamp1-202ENSMUST00000063588 Plppr3Q7TPB0 716 aa14.89□□□□□ -0.03
Vamp1-202ENSMUST00000063588 CrbnQ8C7D2 445 aa14.89□□□□□ -0.03
Vamp1-202ENSMUST00000063588 P2rx7Q9Z1M0 595 aa14.89□□□□□ -0.03
Vamp1-202ENSMUST00000063588 Topaz1E5FYH1 1653 aa14.88□□□□□ -0.03
Vamp1-202ENSMUST00000063588 Mdc1Q5PSV9 1707 aa14.88□□□□□ -0.03
Vamp1-202ENSMUST00000063588 Zranb1Q7M760 708 aa14.88□□□□□ -0.03
Vamp1-202ENSMUST00000063588 GphnQ8BUV3 769 aaKnown RBP14.88□□□□□ -0.03
Vamp1-202ENSMUST00000063588 Znf541Q0GGX2 1363 aa14.88□□□□□ -0.03
Vamp1-202ENSMUST00000063588 Plekhh1Q80TI1 1356 aa14.88□□□□□ -0.03
Vamp1-202ENSMUST00000063588 Prdm10Q3UTQ7 1184 aa14.87□□□□□ -0.03
Vamp1-202ENSMUST00000063588 Speer4f1Q9D5Q6 258 aa14.86□□□□□ -0.03
Vamp1-202ENSMUST00000063588 C5P06684 1680 aa14.86□□□□□ -0.03
Vamp1-202ENSMUST00000063588 Als2Q920R0 1651 aa14.86□□□□□ -0.03
Vamp1-202ENSMUST00000063588 Mon2Q80TL7 1715 aa14.85□□□□□ -0.03
Vamp1-202ENSMUST00000063588 CatipB9EKE5 520 aa14.84□□□□□ -0.03
Vamp1-202ENSMUST00000063588 HnrnpmQ9D0E1 729 aaKnown RBP14.84□□□□□ -0.03
Vamp1-202ENSMUST00000063588 Znf335A2A5K6 1337 aa14.84□□□□□ -0.03
Vamp1-202ENSMUST00000063588 Alpk3Q924C5 1678 aa14.84□□□□□ -0.03
Vamp1-202ENSMUST00000063588 Anp32aO35381 247 aa14.83□□□□□ -0.03
Vamp1-202ENSMUST00000063588 Ccdc30Q8BVF4 654 aa14.83□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms