RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 Trim58Q5NCC9 485 aa12.36□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Als2cr12Q8BVM7 383 aa12.36□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Atl3Q91YH5 541 aa12.36□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Cchcr1Q8K2I2 770 aa12.36□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Fam184aE9PW83 1143 aa12.35□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Birc3O08863 600 aa12.35□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Ecm2Q5FW85 670 aa12.35□□□□□ -0.43
Col6a3-201ENSMUST00000056925 CenphQ9QYM8 241 aa12.35□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Pdcl2Q78Y63 240 aa12.35□□□□□ -0.43
Col6a3-201ENSMUST00000056925 KarsQ99MN1 595 aaKnown RBP12.35□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Ccdc94Q9D6J3 314 aa12.35□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Fam107bQ3TGF2 131 aa12.35□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Kif15Q6P9L6 1387 aa12.34□□□□□ -0.43
Col6a3-201ENSMUST00000056925 LarsQ8BMJ2 1178 aa12.34□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Map4P27546 1125 aaKnown RBP12.34□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Usp35M0QWN7 1009 aa12.33□□□□□ -0.43
Col6a3-201ENSMUST00000056925 Gtpbp4Q99ME9 634 aaKnown RBP12.33□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Gm18336A0A140LIU8 765 aa12.33□□□□□ -0.44
Col6a3-201ENSMUST00000056925 4921504E06RikQ8CET2 560 aa12.33□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Mphosph9A6H5Y1 991 aa12.33□□□□□ -0.44
Col6a3-201ENSMUST00000056925 FosbP13346 338 aa12.33□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Ssh1Q76I79 1042 aa12.33□□□□□ -0.44
Col6a3-201ENSMUST00000056925 4933428M09RikQ9D3X3 192 aa12.33□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Eif3aP23116 1344 aaKnown RBP12.33□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Bbof1Q3V079 533 aa12.33□□□□□ -0.44
Col6a3-201ENSMUST00000056925 TxlnbQ8VBT1 685 aa12.33□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Plekhh1Q80TI1 1356 aa12.32□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Ttll13A4Q9F6 804 aa12.32□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Trak1Q6PD31 939 aa12.32□□□□□ -0.44
Col6a3-201ENSMUST00000056925 PhaxQ9JJT9 385 aaKnown RBP12.32□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Ccdc191J3QQ27 883 aa12.32□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Smc1bQ920F6 1248 aa12.32□□□□□ -0.44
Col6a3-201ENSMUST00000056925 TnmdQ9EP64 317 aa12.32□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Cpsf2O35218 782 aaKnown RBP12.32□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Sass6Q80UK7 654 aa12.31□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Q9D2X8 372 aa12.31□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Plekhh2Q8C115 1491 aa12.31□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Cep162Q6ZQ06 1403 aa12.31□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Usp48Q3V0C5 1052 aa12.31□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Tex2Q6ZPJ0 1128 aaKnown RBP12.31□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Nol12Q8BG17 217 aa12.3□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Cetn4Q8K4K1 168 aa12.3□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Zkscan1Q8BGS3 561 aaKnown RBP12.3□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Dnaaf4Q8R368 420 aa12.3□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Trim25Q61510 634 aaKnown RBP12.3□□□□□ -0.44
Col6a3-201ENSMUST00000056925 CenpqQ9CPQ5 267 aa12.3□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Cfap99A0A140LIX9 648 aa12.3□□□□□ -0.44
Col6a3-201ENSMUST00000056925 March6Q6ZQ89 909 aa12.3□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Tsen2Q6P7W5 460 aa12.3□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Slu7Q8BHJ9 585 aa12.3□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Ssr1Q9CY50 286 aaKnown RBP12.29□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Srcin1Q9QWI6 1250 aa12.29□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Tnpo1Q8BFY9 898 aaKnown RBP12.29□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Stk26Q99JT2 416 aa12.29□□□□□ -0.44
Col6a3-201ENSMUST00000056925 G3bp1P97855 465 aaKnown RBP12.29□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Ddx46Q569Z5 1032 aaKnown RBP12.29□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Med4Q9CQA5 270 aa12.29□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Luc7lQ9CYI4 371 aaKnown RBP12.29□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Secisbp2lQ6A098 1086 aaKnown RBP12.28□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Jakmip3Q5DTN8 844 aa12.28□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Skor1Q8BX46 964 aa12.28□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Ints3Q7TPD0 1041 aaKnown RBP12.28□□□□□ -0.44
Col6a3-201ENSMUST00000056925 SarnpQ9D1J3 210 aaKnown RBP12.28□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Wdr63B2RY71 923 aa12.28□□□□□ -0.44
Col6a3-201ENSMUST00000056925 AnlnQ8K298 1121 aaKnown RBP12.28□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Kif27Q7M6Z4 1394 aa12.28□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Usp47Q8BY87 1376 aa12.28□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Arhgap27A2AB59 869 aa12.28□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Trim29Q8R2Q0 587 aa12.27□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Syce3B5KM66 88 aa12.27□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Sptbn5F6UCX4 1208 aa12.27□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Tex35Q14BK3 207 aa12.27□□□□□ -0.44
Col6a3-201ENSMUST00000056925 Pde1cQ64338 706 aa12.27□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Lamb3Q61087 1168 aa12.27□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Psma5Q9Z2U1 241 aaKnown RBP12.27□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Erc2Q6PH08 957 aa12.27□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Maats1Q8BRC6 783 aa12.27□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Fam114a1Q9D281 569 aa12.27□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Triml2E9PW10 424 aa12.27□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Armc9Q9D2I5 817 aa12.27□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Gnl2Q99LH1 728 aaKnown RBP12.26□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Rsph10bE9PYQ0 876 aa12.26□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Kif2aP28740 705 aa12.26□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Abcd1P48410 736 aa12.26□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Tax1bp1Q3UKC1 814 aaKnown RBP12.26□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Rassf4Q8CB96 322 aa12.26□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Map2k1P31938 393 aa12.26□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Hvcn1Q3U2S8 269 aa12.26□□□□□ -0.45
Col6a3-201ENSMUST00000056925 IqcgQ80W32 419 aa12.26□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Ppp2r3aB2RXC8 1150 aa12.26□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Ccdc112A0AUP1 442 aa12.26□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Rbm25B2RY56 838 aaKnown RBP12.26□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Hmox1P14901 289 aa12.26□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Gigyf2Q6Y7W8 1291 aaKnown RBP12.26□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Ccp110Q7TSH4 1004 aa12.26□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Znf710Q3U288 666 aa12.25□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Pank3Q8R2W9 370 aa12.25□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Erlin1Q91X78 346 aa12.25□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Cc2d1aQ8K1A6 943 aa12.25□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Vps37cQ8R105 352 aa12.25□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms