RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Ric3Q8BPM6 367 aa9.2□□□□□ -0.94
Usp40-201ENSMUST00000040783 Q8C5K5 320 aa9.2□□□□□ -0.94
Usp40-201ENSMUST00000040783 Atp6v1dP57746 247 aa9.2□□□□□ -0.94
Usp40-201ENSMUST00000040783 VgfQ0VGU4 617 aa9.2□□□□□ -0.94
Usp40-201ENSMUST00000040783 Dnai1Q8C0M8 701 aa9.2□□□□□ -0.94
Usp40-201ENSMUST00000040783 Rpgrip1lQ8CG73 1264 aa9.2□□□□□ -0.94
Usp40-201ENSMUST00000040783 TefQ9JLC6 301 aa9.2□□□□□ -0.94
Usp40-201ENSMUST00000040783 Zeb2Q9R0G7 1215 aa9.2□□□□□ -0.94
Usp40-201ENSMUST00000040783 Rbm25B2RY56 838 aaKnown RBP9.19□□□□□ -0.94
Usp40-201ENSMUST00000040783 Gm973E9Q295 1059 aa9.19□□□□□ -0.94
Usp40-201ENSMUST00000040783 Dhx16G3X8X0 1044 aaKnown RBP9.19□□□□□ -0.94
Usp40-201ENSMUST00000040783 CgnP59242 1191 aa9.19□□□□□ -0.94
Usp40-201ENSMUST00000040783 Cfdp1O88271 295 aaKnown RBP9.19□□□□□ -0.94
Usp40-201ENSMUST00000040783 Znf526Q8BI66 675 aa9.19□□□□□ -0.94
Usp40-201ENSMUST00000040783 Trim58Q5NCC9 485 aa9.19□□□□□ -0.94
Usp40-201ENSMUST00000040783 Sv2bQ8BG39 683 aa9.19□□□□□ -0.94
Usp40-201ENSMUST00000040783 Tomm22Q9CPQ3 142 aa9.19□□□□□ -0.94
Usp40-201ENSMUST00000040783 Ythdc2B2RR83 1445 aaKnown RBP9.18□□□□□ -0.94
Usp40-201ENSMUST00000040783 Triml2E9PW10 424 aa9.18□□□□□ -0.94
Usp40-201ENSMUST00000040783 Ccdc30Q8BVF4 654 aa9.18□□□□□ -0.94
Usp40-201ENSMUST00000040783 Bcl2l13P59017 434 aa9.18□□□□□ -0.94
Usp40-201ENSMUST00000040783 Mrvi1Q9WUX5 899 aaKnown RBP9.18□□□□□ -0.94
Usp40-201ENSMUST00000040783 Pcmtd1P59913 357 aa9.17□□□□□ -0.94
Usp40-201ENSMUST00000040783 MpripP97434 1024 aa9.17□□□□□ -0.94
Usp40-201ENSMUST00000040783 Cavin4A2AMM0 362 aa9.17□□□□□ -0.94
Usp40-201ENSMUST00000040783 Spryd3E9Q9B3 442 aa9.17□□□□□ -0.94
Usp40-201ENSMUST00000040783 Q3UJC8 639 aa9.17□□□□□ -0.94
Usp40-201ENSMUST00000040783 Dmrt2Q8BG36 561 aa9.17□□□□□ -0.94
Usp40-201ENSMUST00000040783 Kdm5bQ80Y84 1544 aa9.17□□□□□ -0.94
Usp40-201ENSMUST00000040783 Cnnm1Q0GA42 951 aa9.17□□□□□ -0.94
Usp40-201ENSMUST00000040783 Ppp2r1aQ76MZ3 589 aa9.17□□□□□ -0.94
Usp40-201ENSMUST00000040783 Znf771Q8BJ90 317 aa9.17□□□□□ -0.94
Usp40-201ENSMUST00000040783 4930572O03RikQ8C5Y0 211 aa9.17□□□□□ -0.94
Usp40-201ENSMUST00000040783 Abcc5Q9R1X5 1436 aa9.17□□□□□ -0.94
Usp40-201ENSMUST00000040783 PsapQ61207 557 aaKnown RBP9.16□□□□□ -0.94
Usp40-201ENSMUST00000040783 BcanQ61361 883 aa9.16□□□□□ -0.94
Usp40-201ENSMUST00000040783 Eif2s2Q99L45 331 aaKnown RBP9.16□□□□□ -0.94
Usp40-201ENSMUST00000040783 Rab3gap2Q8BMG7 1366 aa9.16□□□□□ -0.94
Usp40-201ENSMUST00000040783 Speer4bQ9D9F7 267 aa9.16□□□□□ -0.94
Usp40-201ENSMUST00000040783 Erich6bQ9D4S6 220 aa9.16□□□□□ -0.94
Usp40-201ENSMUST00000040783 Fancd2Q80V62 1450 aa9.16□□□□□ -0.94
Usp40-201ENSMUST00000040783 Gm21680A0A0G2JGR8 267 aa9.15□□□□□ -0.94
Usp40-201ENSMUST00000040783 Neurod6P48986 337 aa9.15□□□□□ -0.94
Usp40-201ENSMUST00000040783 Ylpm1Q9R0I7 1386 aaKnown RBP9.15□□□□□ -0.94
Usp40-201ENSMUST00000040783 ChgaP26339 463 aaKnown RBP9.15□□□□□ -0.94
Usp40-201ENSMUST00000040783 Kcnh5Q920E3 988 aa9.15□□□□□ -0.94
Usp40-201ENSMUST00000040783 Kiaa1211Q5PR69 1207 aa9.14□□□□□ -0.95
Usp40-201ENSMUST00000040783 Rbm5Q91YE7 815 aaKnown RBP9.14□□□□□ -0.95
Usp40-201ENSMUST00000040783 Ccdc171E9Q1U1 1324 aa9.14□□□□□ -0.95
Usp40-201ENSMUST00000040783 CrcpO35427 148 aa9.14□□□□□ -0.95
Usp40-201ENSMUST00000040783 Znf692Q3U381 531 aa9.14□□□□□ -0.95
Usp40-201ENSMUST00000040783 Mphosph10Q810V0 681 aaKnown RBP9.14□□□□□ -0.95
Usp40-201ENSMUST00000040783 Pcf11G3X9Z4 1553 aa9.14□□□□□ -0.95
Usp40-201ENSMUST00000040783 Slc5a4bQ91ZP4 660 aa9.14□□□□□ -0.95
Usp40-201ENSMUST00000040783 IbtkQ6ZPR6 1352 aaKnown RBP9.14□□□□□ -0.95
Usp40-201ENSMUST00000040783 Gm21663A0A0G2JE01 267 aa9.14□□□□□ -0.95
Usp40-201ENSMUST00000040783 Gm7361D3Z6R1 267 aa9.14□□□□□ -0.95
Usp40-201ENSMUST00000040783 5031410I06RikE9Q4E0 267 aa9.14□□□□□ -0.95
Usp40-201ENSMUST00000040783 Gm1979E9QAN3 267 aa9.14□□□□□ -0.95
Usp40-201ENSMUST00000040783 Gm5862K7N5V5 267 aa9.14□□□□□ -0.95
Usp40-201ENSMUST00000040783 Gm10220K7N660 267 aa9.14□□□□□ -0.95
Usp40-201ENSMUST00000040783 Tpm2P58774 284 aa9.14□□□□□ -0.95
Usp40-201ENSMUST00000040783 Cplx2P84086 134 aa9.14□□□□□ -0.95
Usp40-201ENSMUST00000040783 CrebrfQ8CDG5 640 aaKnown RBP9.14□□□□□ -0.95
Usp40-201ENSMUST00000040783 Sugp2Q8CH09 1067 aa9.14□□□□□ -0.95
Usp40-201ENSMUST00000040783 Hmgb2P30681 210 aaKnown RBP9.13□□□□□ -0.95
Usp40-201ENSMUST00000040783 Erc2Q6PH08 957 aa9.13□□□□□ -0.95
Usp40-201ENSMUST00000040783 Gm10563F6WIE4 79 aa9.13□□□□□ -0.95
Usp40-201ENSMUST00000040783 UvssaQ9D479 717 aa9.13□□□□□ -0.95
Usp40-201ENSMUST00000040783 PhaxQ9JJT9 385 aaKnown RBP9.13□□□□□ -0.95
Usp40-201ENSMUST00000040783 Naip2Q9QUK4 1447 aa9.13□□□□□ -0.95
Usp40-201ENSMUST00000040783 Nectin2P32507 530 aa9.12□□□□□ -0.95
Usp40-201ENSMUST00000040783 Stard3nlQ9DCI3 235 aa9.12□□□□□ -0.95
Usp40-201ENSMUST00000040783 Gprasp1Q5U4C1 1347 aa9.12□□□□□ -0.95
Usp40-201ENSMUST00000040783 Noc3lQ8VI84 807 aaKnown RBP9.12□□□□□ -0.95
Usp40-201ENSMUST00000040783 Ccer1Q9CQL2 403 aa9.12□□□□□ -0.95
Usp40-201ENSMUST00000040783 Fkbp4P30416 458 aa9.12□□□□□ -0.95
Usp40-201ENSMUST00000040783 Rnf20Q5DTM8 973 aa9.12□□□□□ -0.95
Usp40-201ENSMUST00000040783 Vps53Q8CCB4 832 aa9.11□□□□□ -0.95
Usp40-201ENSMUST00000040783 Fam135aQ6NS59 1506 aa9.11□□□□□ -0.95
Usp40-201ENSMUST00000040783 Apaf1O88879 1249 aa9.11□□□□□ -0.95
Usp40-201ENSMUST00000040783 Kcnh8P59111 1102 aa9.11□□□□□ -0.95
Usp40-201ENSMUST00000040783 Plekhg5Q66T02 1073 aa9.11□□□□□ -0.95
Usp40-201ENSMUST00000040783 Eif3bQ8JZQ9 803 aaKnown RBP9.11□□□□□ -0.95
Usp40-201ENSMUST00000040783 Cabp2Q9JLK4 216 aa9.11□□□□□ -0.95
Usp40-201ENSMUST00000040783 AI481877A2ALV5 1481 aa9.11□□□□□ -0.95
Usp40-201ENSMUST00000040783 Fchsd2Q3USJ8 740 aa9.11□□□□□ -0.95
Usp40-201ENSMUST00000040783 Q7TT23 1179 aa9.11□□□□□ -0.95
Usp40-201ENSMUST00000040783 Disp1Q3TDN0 1521 aa9.1□□□□□ -0.95
Usp40-201ENSMUST00000040783 Mapkbp1Q6NS57 1503 aa9.1□□□□□ -0.95
Usp40-201ENSMUST00000040783 Calcoco2A2A6M5 331 aa9.1□□□□□ -0.95
Usp40-201ENSMUST00000040783 GnpatP98192 678 aa9.1□□□□□ -0.95
Usp40-201ENSMUST00000040783 Evc2Q8K1G2 1220 aa9.1□□□□□ -0.95
Usp40-201ENSMUST00000040783 Tpd52l1O54818 204 aa9.1□□□□□ -0.95
Usp40-201ENSMUST00000040783 Gpatch8A2A6A1 1505 aa9.1□□□□□ -0.95
Usp40-201ENSMUST00000040783 Rfx7F8VPJ6 1459 aa9.1□□□□□ -0.95
Usp40-201ENSMUST00000040783 Gm21969J3QJZ1 289 aa9.1□□□□□ -0.95
Usp40-201ENSMUST00000040783 SetQ9EQU5 289 aaKnown RBP9.1□□□□□ -0.95
Usp40-201ENSMUST00000040783 Filip1lQ6P6L0 1131 aa9.1□□□□□ -0.95
Usp40-201ENSMUST00000040783 Sall3Q62255 1320 aa9.09□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 83.8 ms