RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Exoc6bA6H5Z3 810 aa10.71□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Smarca5Q91ZW3 1051 aaKnown RBP10.71□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Nek4Q9Z1J2 792 aa10.71□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Smg7Q5RJH6 1138 aaKnown RBP10.71□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Tmc1Q8R4P5 757 aa10.71□□□□□ -0.69
Ttc28-201ENSMUST00000040111 Mad1l1Q9WTX8 717 aaKnown RBP10.71□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Naip1Q9QWK5 1403 aa10.71□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Gm21680A0A0G2JGR8 267 aa10.71□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Gtf2f1Q3THK3 508 aaKnown RBP10.71□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Ccdc155Q80VJ8 648 aa10.71□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Sv2bQ8BG39 683 aa10.71□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Ncoa2Q61026 1462 aa10.7□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Znf697Q569E7 569 aa10.7□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Tpm3P21107 285 aaKnown RBP10.7□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Nol8Q3UHX0 1147 aaKnown RBP10.7□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Zfp777B9EKF4 885 aa10.7□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Krt82Q99M74 516 aa10.69□□□□□ -0.7
Ttc28-201ENSMUST00000040111 PogkQ80TC5 607 aa10.69□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Ppfia3P60469 1194 aa10.69□□□□□ -0.7
Ttc28-201ENSMUST00000040111 VeztQ3ZK22 780 aa10.69□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Noc3lQ8VI84 807 aaKnown RBP10.69□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Cspp1B2RX88 1205 aa10.68□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Gm21663A0A0G2JE01 267 aa10.68□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Gm7361D3Z6R1 267 aa10.68□□□□□ -0.7
Ttc28-201ENSMUST00000040111 5031410I06RikE9Q4E0 267 aa10.68□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Gm1979E9QAN3 267 aa10.68□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Gm5862K7N5V5 267 aa10.68□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Gm10220K7N660 267 aa10.68□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Tspyl2Q7TQI8 677 aa10.68□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Hnrnpul1Q8VDM6 859 aaKnown RBP10.68□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Atxn3Q9CVD2 355 aa10.68□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Ift140E9PY46 1464 aa10.68□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Swt1Q9DBQ9 907 aa10.67□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Drc7Q6V3W6 876 aa10.67□□□□□ -0.7
Ttc28-201ENSMUST00000040111 InsrP15208 1372 aa10.67□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Pde3bQ61409 1100 aa10.67□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Asxl2Q8BZ32 1370 aa10.67□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Sf3a1Q8K4Z5 791 aaKnown RBP10.66□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Smarce1O54941 411 aaKnown RBP10.66□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Dusp9Q7TNL7 452 aa10.66□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Rsph3aQ3UFY4 516 aa10.66□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Neo1P97798 1493 aa10.66□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Dusp27Q148W8 1138 aa10.65□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Mre11Q61216 706 aa10.65□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Kri1Q8VDQ9 704 aaKnown RBP10.65□□□□□ -0.7
Ttc28-201ENSMUST00000040111 Fam170aQ66LM6 333 aa10.65□□□□□ -0.71
Ttc28-201ENSMUST00000040111 CrcpO35427 148 aa10.64□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Fgd6Q69ZL1 1399 aa10.64□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Tmem132eQ6IEE6 982 aa10.64□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Gm10563F6WIE4 79 aa10.64□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Ripply1Q2WG77 201 aa10.64□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Ltv1Q6NSQ7 470 aaKnown RBP10.64□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Ttc19Q8CC21 365 aa10.64□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Ankrd36D3Z4K0 1415 aa10.64□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Usp48Q3V0C5 1052 aa10.64□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Trim58Q5NCC9 485 aa10.64□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Plagl1Q9JLQ4 704 aa10.64□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Dnai2A2AC93 623 aa10.64□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Zrsr2Q62377 462 aaKnown RBP10.64□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Kif20aP97329 887 aa10.64□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Erich4Q3UNU4 136 aa10.64□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Gm21969J3QJZ1 289 aa10.64□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Rnf214Q8BFU3 668 aaKnown RBP10.64□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Cwc27Q3TKY6 469 aa10.63□□□□□ -0.71
Ttc28-201ENSMUST00000040111 ApobrQ8VBT6 942 aa10.63□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Fbln2P37889 1221 aa10.63□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Igflr1Q3U4N7 345 aa10.62□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Gnai1B2RSH2 354 aa10.62□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Gnai3Q9DC51 354 aa10.62□□□□□ -0.71
Ttc28-201ENSMUST00000040111 AcrbpQ3V140 540 aa10.62□□□□□ -0.71
Ttc28-201ENSMUST00000040111 EappQ5BU09 281 aa10.62□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Stard8Q8K031 1019 aa10.62□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Atp6v1dP57746 247 aa10.62□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Cdc37l1Q9CZP7 335 aa10.62□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Top2aQ01320 1528 aaKnown RBP10.61□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Dnajc2P54103 621 aaKnown RBP10.61□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Gm14025A2AP89 1413 aa10.61□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Cog6Q8R3I3 657 aa10.61□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Klhdc4Q921I2 584 aa10.61□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Rrs1Q9CYH6 365 aaKnown RBP10.61□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Cyp46a1Q9WVK8 500 aa10.61□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Nsd2Q8BVE8 1365 aa10.61□□□□□ -0.71
Ttc28-201ENSMUST00000040111 ArsiQ32KI9 573 aa10.61□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Bicd2Q921C5 820 aa10.6□□□□□ -0.71
Ttc28-201ENSMUST00000040111 PogzQ8BZH4 1409 aaKnown RBP10.6□□□□□ -0.71
Ttc28-201ENSMUST00000040111 AqrQ8CFQ3 1481 aaKnown RBP10.6□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Frmpd1A2AKB4 1549 aa10.6□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Tpm4Q6IRU2 248 aa10.6□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Tut1Q8R3F9 869 aa10.6□□□□□ -0.71
Ttc28-201ENSMUST00000040111 TefQ9JLC6 301 aa10.6□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Mrc2Q64449 1479 aa10.6□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Ralbp1Q62172 648 aa10.6□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Ankib1Q6ZPS6 1085 aa10.6□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Ipo4Q8VI75 1082 aa10.6□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Rbm10Q99KG3 930 aaKnown RBP10.6□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Dixdc1Q80Y83 711 aa10.6□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Smc4Q8CG47 1286 aa10.6□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Efcab5A0JP43 1406 aa10.59□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Grin2bQ01097 1482 aa10.59□□□□□ -0.71
Ttc28-201ENSMUST00000040111 CadpsQ80TJ1 1355 aa10.59□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 39.6 ms