RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 HnrnpuQ8VEK3 800 aaKnown RBP10.78□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 Efcab6Q6P1E8 1516 aa10.78□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 Rangap1P46061 589 aaKnown RBP10.78□□□□□ -0.68
Sf3b1-201ENSMUST00000027127 Atp10aO54827 1508 aa10.77□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Ipo8Q7TMY7 1010 aa10.77□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Setd1aE9PYH6 1716 aa10.77□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Cdk19Q8BWD8 501 aa10.77□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Dnai1Q8C0M8 701 aa10.76□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Cavin4A2AMM0 362 aa10.76□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Fchsd2Q3USJ8 740 aa10.76□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Depdc5P61460 1591 aa10.76□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Ccdc171E9Q1U1 1324 aa10.76□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Htatsf1Q8BGC0 757 aa10.76□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Synj2Q9D2G5 1434 aa10.75□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Robo2Q7TPD3 1470 aa10.75□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Lrrc7Q80TE7 1490 aa10.75□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Swt1Q9DBQ9 907 aa10.75□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Ptch1Q61115 1434 aa10.75□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 NgefQ8CHT1 710 aa10.74□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Myom2Q14BI5 1463 aa10.74□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Chd1P40201 1711 aa10.74□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Atl3Q91YH5 541 aa10.74□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Ttll13A4Q9F6 804 aa10.73□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Zcchc11B2RX14 1644 aaKnown RBP10.73□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Rtf1A2AQ19 715 aaKnown RBP10.73□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Znf316Q6PGE4 1016 aa10.73□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Uspl1Q3ULM6 1089 aa10.73□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Rab11fip3Q8CHD8 1047 aa10.73□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Ccdc60Q8C4J0 545 aa10.73□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Stk31Q99MW1 1018 aa10.73□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Adamts13Q769J6 1426 aa10.73□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Gnai1B2RSH2 354 aa10.73□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Gnai3Q9DC51 354 aa10.73□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 G3bp1P97855 465 aaKnown RBP10.72□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Armcx1Q9CX83 456 aa10.72□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Gprasp1Q5U4C1 1347 aa10.72□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Cep152A2AUM9 1736 aaKnown RBP10.72□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Uggt1Q6P5E4 1551 aa10.71□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Rims1Q99NE5 1463 aa10.71□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Hfm1D3Z4R1 1434 aa10.71□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Prrc2bQ7TPM1 1486 aaKnown RBP10.71□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Ncbp3Q8BZR9 615 aaKnown RBP10.71□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Adgrl3Q80TS3 1537 aa10.71□□□□□ -0.69
Sf3b1-201ENSMUST00000027127 Ttc41Q692V3 1318 aa10.71□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Eif2ak4Q9QZ05 1648 aa10.71□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 ShprhQ7TPQ3 1674 aa10.71□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Plxnc1Q9QZC2 1574 aa10.71□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 ArxO35085 564 aa10.71□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Cdc42bpbQ7TT50 1713 aa10.7□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Tmco5bQ80X59 307 aa10.7□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Rbm25B2RY56 838 aaKnown RBP10.7□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Pank1Q8K4K6 548 aa10.7□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Ap3b2Q9JME5 1082 aa10.7□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Dusp27Q148W8 1138 aa10.7□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Apaf1O88879 1249 aa10.69□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 MyclP10166 368 aa10.69□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Col17a1Q07563 1470 aa10.69□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Kidins220E9Q9B7 1793 aa10.69□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Cgnl1Q6AW69 1298 aa10.69□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 U2surpQ6NV83 1029 aaKnown RBP10.69□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 TnikP83510 1323 aa10.69□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Ppp1r15aP17564 657 aa10.68□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Kcnh8P59111 1102 aa10.68□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Pdcd11Q6NS46 1862 aaKnown RBP10.68□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 PaskQ8CEE6 1383 aa10.67□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Myo3aQ8K3H5 1613 aa10.67□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Pak3Q61036 559 aa10.67□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Adgrb3Q80ZF8 1522 aa10.67□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Zmym3Q9JLM4 1370 aa10.66□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 NpatQ8BMA5 1420 aa10.66□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Idi2Q8BFZ6 227 aa10.66□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Cluap1Q8R3P7 413 aa10.66□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Hoxb7P09024 217 aa10.66□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Mre11Q61216 706 aa10.66□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Cdc42bpgQ80UW5 1551 aa10.66□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Abca6Q8K441 1624 aa10.66□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Smc5Q8CG46 1101 aaKnown RBP10.65□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Znf330Q922H9 316 aa10.65□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 1700019A02RikA0A087WPV9 146 aa10.65□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Itsn2Q9Z0R6 1659 aa10.65□□□□□ -0.7
Sf3b1-201ENSMUST00000027127 Iqgap3F8VQ29 1632 aa10.65□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Plekhg1F6S200 1446 aa10.65□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 CatipB9EKE5 520 aa10.65□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Kdm5aQ3UXZ9 1690 aa10.65□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 AU022751B1B0V2 589 aa10.64□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Hs1bp3Q3TC93 395 aa10.64□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Sos1Q62245 1319 aa10.64□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Tecpr2Q3UH45 1423 aa10.64□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Erbb3Q61526 1339 aa10.64□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Sart3Q9JLI8 962 aaKnown RBP10.64□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 KdrP35918 1367 aa10.64□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Ak7Q9D2H2 614 aa10.64□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 PalmQ9Z0P4 383 aa10.64□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Sox12Q04890 314 aa10.63□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Abca17E9PX95 1733 aa10.63□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Scaf11E9PZM7 1456 aaKnown RBP10.63□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Topbp1Q6ZQF0 1515 aa10.63□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Cetn4Q8K4K1 168 aa10.63□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Ppp2r3aB2RXC8 1150 aa10.63□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 ChgaP26339 463 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms