RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W YGR121W-AQ3E816 71 aa9.32□□□□□ -0.92
SHR5YOL110W DDR48P18899 430 aaKnown RBP9.31□□□□□ -0.92
SHR5YOL110W YOR072WQ08486 104 aa9.31□□□□□ -0.92
SHR5YOL110W SAP30P38429 201 aa9.3□□□□□ -0.92
SHR5YOL110W SPG1P50088 95 aa9.3□□□□□ -0.92
SHR5YOL110W RPL36BO14455 100 aaKnown RBP9.27□□□□□ -0.93
SHR5YOL110W RPA12P32529 125 aaKnown RBP9.27□□□□□ -0.93
SHR5YOL110W ATP18P81450 59 aa9.27□□□□□ -0.93
SHR5YOL110W YHR139C-AO13536 103 aa9.26□□□□□ -0.93
SHR5YOL110W OST2P46964 130 aa9.26□□□□□ -0.93
SHR5YOL110W YFL067WP43537 175 aa9.25□□□□□ -0.93
SHR5YOL110W YGL149WP53116 101 aa9.25□□□□□ -0.93
SHR5YOL110W YJR085CP47131 105 aaKnown RBP9.24□□□□□ -0.93
SHR5YOL110W YAR1P46683 200 aa9.23□□□□□ -0.93
SHR5YOL110W YOR268CQ08734 132 aa9.23□□□□□ -0.93
SHR5YOL110W YFR009W-AP0C5M9 85 aa9.19□□□□□ -0.94
SHR5YOL110W PBI2P0CT04 75 aaKnown RBP9.18□□□□□ -0.94
SHR5YOL110W KRE1P17260 313 aa9.16□□□□□ -0.94
SHR5YOL110W YMR230W-AQ3E7B5 62 aa9.16□□□□□ -0.94
SHR5YOL110W ATX1P38636 73 aa9.15□□□□□ -0.94
SHR5YOL110W YCR085WP25650 117 aa9.14□□□□□ -0.95
SHR5YOL110W RSM18P40033 138 aa9.1□□□□□ -0.95
SHR5YOL110W YNL184CP53876 108 aa9.1□□□□□ -0.95
SHR5YOL110W YDR381C-AQ3E6R5 114 aa9.1□□□□□ -0.95
SHR5YOL110W TDA8Q6B2U8 126 aa9.1□□□□□ -0.95
SHR5YOL110W YBR027CP38220 110 aa9.09□□□□□ -0.95
SHR5YOL110W YHR213W-BQ8TGK1 99 aa9.09□□□□□ -0.95
SHR5YOL110W ICS3P47034 131 aa9.08□□□□□ -0.96
SHR5YOL110W RSM19P53733 91 aaPredicted RBP9.08□□□□□ -0.96
SHR5YOL110W YDR010CQ12426 110 aa9.07□□□□□ -0.96
SHR5YOL110W INO4P13902 151 aa9.04□□□□□ -0.96
SHR5YOL110W YJL133C-AQ3E7A3 74 aa9.04□□□□□ -0.96
SHR5YOL110W SKI6P46948 246 aaPredicted RBP9.03□□□□□ -0.96
SHR5YOL110W RPL38P49167 78 aaKnown RBP9.01□□□□□ -0.97
SHR5YOL110W EDC1P53080 175 aaPredicted RBP9.01□□□□□ -0.97
SHR5YOL110W SHH4Q06236 168 aa9.01□□□□□ -0.97
SHR5YOL110W KTI11Q3E840 82 aa9.01□□□□□ -0.97
SHR5YOL110W COX23P38824 151 aa9□□□□□ -0.97
SHR5YOL110W TDA2P40045 126 aa9□□□□□ -0.97
SHR5YOL110W ISD11Q6Q560 94 aa9□□□□□ -0.97
SHR5YOL110W ECM19Q06011 112 aa8.99□□□□□ -0.97
SHR5YOL110W SLO1Q3E784 85 aa8.99□□□□□ -0.97
SHR5YOL110W YLR162WQ06235 118 aa8.97□□□□□ -0.97
SHR5YOL110W KSH1Q8TGJ3 72 aa8.97□□□□□ -0.97
SHR5YOL110W RAD6P06104 172 aa8.96□□□□□ -0.98
SHR5YOL110W YJL197C-AP0C5P0 93 aa8.96□□□□□ -0.98
SHR5YOL110W MIC10Q96VH5 97 aa8.94□□□□□ -0.98
SHR5YOL110W YLR157W-DP0CE99 70 aa8.93□□□□□ -0.98
SHR5YOL110W YOL014WQ08110 124 aa8.9□□□□□ -0.98
SHR5YOL110W EMC6Q12431 108 aa8.9□□□□□ -0.98
SHR5YOL110W YAL063C-AQ3E791 96 aa8.9□□□□□ -0.98
SHR5YOL110W RPP2AP05319 106 aaKnown RBP8.89□□□□□ -0.99
SHR5YOL110W YEL045CP32616 141 aa8.89□□□□□ -0.99
SHR5YOL110W COF1Q03048 143 aaKnown RBP8.89□□□□□ -0.99
SHR5YOL110W YHL042WP38729 150 aa8.87□□□□□ -0.99
SHR5YOL110W YOL097W-AQ3E7Y9 61 aa8.87□□□□□ -0.99
SHR5YOL110W YBR182C-AQ8TGU6 64 aa8.86□□□□□ -0.99
SHR5YOL110W ATP20Q12233 115 aa8.84□□□□□ -0.99
SHR5YOL110W RUB1Q03919 77 aa8.82□□□□□ -1
SHR5YOL110W HOT13P36078 116 aa8.81□□□□□ -1
SHR5YOL110W YFL041W-AQ3E817 63 aa8.81□□□□□ -1
SHR5YOL110W YCR050CP25630 102 aa8.78□□□□□ -1
SHR5YOL110W YHL005CP38752 130 aa8.78□□□□□ -1
SHR5YOL110W YLR285C-AQ3E771 56 aa8.78□□□□□ -1
SHR5YOL110W YOR304C-AO14468 76 aa8.77□□□□□ -1.01
SHR5YOL110W YHL018WP38744 120 aaPredicted RBP8.77□□□□□ -1.01
SHR5YOL110W YCR043CP25361 127 aa8.75□□□□□ -1.01
SHR5YOL110W YSY6P38374 65 aa8.75□□□□□ -1.01
SHR5YOL110W YFL065CP43539 102 aa8.75□□□□□ -1.01
SHR5YOL110W YPR203WQ08994 102 aa8.75□□□□□ -1.01
SHR5YOL110W YAR064WP39563 99 aa8.64□□□□□ -1.03
SHR5YOL110W COX7P10174 60 aa8.63□□□□□ -1.03
SHR5YOL110W YKL183C-AQ3E765 70 aa8.62□□□□□ -1.03
SHR5YOL110W RPL36AP05745 100 aaPredicted RBP8.61□□□□□ -1.03
SHR5YOL110W CMC4Q3E7A9 73 aa8.59□□□□□ -1.03
SHR5YOL110W YKL069WP36088 180 aa8.57□□□□□ -1.04
SHR5YOL110W YDL012CQ12489 107 aa8.52□□□□□ -1.05
SHR5YOL110W YHR073W-AP0C5N7 58 aa8.51□□□□□ -1.05
SHR5YOL110W YNL122CP53921 115 aaPredicted RBP8.5□□□□□ -1.05
SHR5YOL110W YPL080CQ02826 108 aa8.5□□□□□ -1.05
SHR5YOL110W YGR039WP53225 103 aa8.49□□□□□ -1.05
SHR5YOL110W YER187WP40102 141 aa8.48□□□□□ -1.05
SHR5YOL110W YOR314WQ12506 109 aa8.48□□□□□ -1.05
SHR5YOL110W YLR361C-AQ3E795 98 aa8.48□□□□□ -1.05
SHR5YOL110W YPR153WQ06537 140 aa8.45□□□□□ -1.06
SHR5YOL110W YDR119W-AQ2V2P9 66 aa8.43□□□□□ -1.06
SHR5YOL110W YIL102CP40488 101 aa8.4□□□□□ -1.06
SHR5YOL110W YPL038W-AQ3E7B4 63 aa8.4□□□□□ -1.06
SHR5YOL110W SOH1P38633 127 aa8.38□□□□□ -1.07
SHR5YOL110W NOP10Q6Q547 58 aaPredicted RBP8.37□□□□□ -1.07
SHR5YOL110W YOL013W-AP0C272 63 aaPredicted RBP8.34□□□□□ -1.07
SHR5YOL110W LIP1Q03579 150 aa8.34□□□□□ -1.07
SHR5YOL110W YOR316C-AQ3E806 69 aa8.32□□□□□ -1.08
SHR5YOL110W YGR164WP53291 111 aa8.29□□□□□ -1.08
SHR5YOL110W HHF1P02309 103 aaKnown RBP8.28□□□□□ -1.08
SHR5YOL110W YDR246W-AQ3E763 66 aa8.26□□□□□ -1.09
SHR5YOL110W YJR128WP47162 119 aa8.23□□□□□ -1.09
SHR5YOL110W AIM4P38305 123 aaPredicted RBP8.22□□□□□ -1.09
SHR5YOL110W YIL002W-AQ3E7Z5 69 aa8.21□□□□□ -1.1
SHR5YOL110W RPL37BP51402 88 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 6.4 ms