RNA–Protein interactions for RNA: YIL143C

SSL2, Transcript of Component of RNA polymerase transcription factor TFIIH holoenzyme, yeastyeast

Gene SSL2, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL2YIL143C YCR050CP25630 102 aa6.2□□□□□ -1.42
SSL2YIL143C TSC3Q3E790 80 aa6.2□□□□□ -1.42
SSL2YIL143C RPC10P40422 70 aa6.19□□□□□ -1.42
SSL2YIL143C KTI11Q3E840 82 aa6.19□□□□□ -1.42
SSL2YIL143C AQY2P0CD90 149 aa6.18□□□□□ -1.42
SSL2YIL143C TDA2P40045 126 aa6.18□□□□□ -1.42
SSL2YIL143C RSM19P53733 91 aaPredicted RBP6.18□□□□□ -1.42
SSL2YIL143C YDR246W-AQ3E763 66 aa6.18□□□□□ -1.42
SSL2YIL143C YNL162W-AQ3E7A8 72 aa6.18□□□□□ -1.42
SSL2YIL143C RSM18P40033 138 aa6.17□□□□□ -1.42
SSL2YIL143C RDS3Q06835 107 aaPredicted RBP6.17□□□□□ -1.42
SSL2YIL143C YFL019CP43576 117 aa6.17□□□□□ -1.42
SSL2YIL143C ATP20Q12233 115 aa6.17□□□□□ -1.42
SSL2YIL143C RPL43AP0CX25 92 aaKnown RBP6.16□□□□□ -1.42
SSL2YIL143C RPL43BP0CX26 92 aa6.16□□□□□ -1.42
SSL2YIL143C YLR412C-AQ3E742 68 aa6.16□□□□□ -1.42
SSL2YIL143C YBL039W-BP0C268 59 aa6.15□□□□□ -1.43
SSL2YIL143C AIR2Q12476 344 aaKnown RBP6.14□□□□□ -1.43
SSL2YIL143C RPL26AP05743 127 aaKnown RBP6.14□□□□□ -1.43
SSL2YIL143C RPL33AP05744 107 aaKnown RBP6.14□□□□□ -1.43
SSL2YIL143C RPL33BP41056 107 aaKnown RBP6.14□□□□□ -1.43
SSL2YIL143C RPL26BP53221 127 aaKnown RBP6.14□□□□□ -1.43
SSL2YIL143C SGF11Q03067 99 aa6.14□□□□□ -1.43
SSL2YIL143C UBC4P15731 148 aa6.13□□□□□ -1.43
SSL2YIL143C AIM4P38305 123 aaPredicted RBP6.13□□□□□ -1.43
SSL2YIL143C FYV5P25585 152 aa6.12□□□□□ -1.43
SSL2YIL143C IGD1P43598 195 aa6.12□□□□□ -1.43
SSL2YIL143C ICS3P47034 131 aa6.12□□□□□ -1.43
SSL2YIL143C YBR230W-AQ3E762 66 aa6.11□□□□□ -1.43
SSL2YIL143C YJL127C-BQ3E828 52 aa6.11□□□□□ -1.43
SSL2YIL143C KSH1Q8TGJ3 72 aa6.11□□□□□ -1.43
SSL2YIL143C YPR010C-AA5Z2X5 72 aa6.1□□□□□ -1.43
SSL2YIL143C YFR032C-BQ8TGU2 87 aa6.1□□□□□ -1.43
SSL2YIL143C YDR115WQ04598 105 aa6.1□□□□□ -1.43
SSL2YIL143C YOL014WQ08110 124 aa6.1□□□□□ -1.43
SSL2YIL143C YGR035W-AQ45U48 73 aa6.1□□□□□ -1.43
SSL2YIL143C NOP10Q6Q547 58 aaPredicted RBP6.09□□□□□ -1.43
SSL2YIL143C UTP20P35194 2493 aaKnown RBP6.09□□□□□ -1.43
SSL2YIL143C RRT15Q3E811 62 aa6.08□□□□□ -1.44
SSL2YIL143C BET1P22804 142 aa6.07□□□□□ -1.44
SSL2YIL143C YOR314WQ12506 109 aa6.07□□□□□ -1.44
SSL2YIL143C YHR213W-BQ8TGK1 99 aa6.06□□□□□ -1.44
SSL2YIL143C COX23P38824 151 aa6.04□□□□□ -1.44
SSL2YIL143C YLR307C-AQ3E825 87 aa6.04□□□□□ -1.44
SSL2YIL143C YLL066W-BQ8TGJ7 56 aa6.04□□□□□ -1.44
SSL2YIL143C Q0032Q9ZZX7 96 aa6.04□□□□□ -1.44
SSL2YIL143C EDC2P40023 145 aaPredicted RBP6.03□□□□□ -1.44
SSL2YIL143C SPC1P46965 94 aa6.03□□□□□ -1.44
SSL2YIL143C DDR48P18899 430 aaKnown RBP6.02□□□□□ -1.45
SSL2YIL143C YNL042W-BQ3E7Z2 85 aa6.02□□□□□ -1.45
SSL2YIL143C YJL133C-AQ3E7A3 74 aa6.01□□□□□ -1.45
SSL2YIL143C MIC10Q96VH5 97 aa6.01□□□□□ -1.45
SSL2YIL143C TOR1P35169 2470 aa6.01□□□□□ -1.45
SSL2YIL143C SNA2P56508 79 aa6.01□□□□□ -1.45
SSL2YIL143C TDA8Q6B2U8 126 aa6□□□□□ -1.45
SSL2YIL143C YGL193CP53097 103 aa6□□□□□ -1.45
SSL2YIL143C YAR023CD6VPM8 179 aa5.99□□□□□ -1.45
SSL2YIL143C RTC6O14464 93 aa5.99□□□□□ -1.45
SSL2YIL143C FYV12Q08559 129 aa5.98□□□□□ -1.45
SSL2YIL143C YOL166W-AQ8TGJ1 51 aa5.98□□□□□ -1.45
SSL2YIL143C YGR164WP53291 111 aa5.96□□□□□ -1.45
SSL2YIL143C RPL36BO14455 100 aaKnown RBP5.96□□□□□ -1.46
SSL2YIL143C RPL36AP05745 100 aaPredicted RBP5.96□□□□□ -1.46
SSL2YIL143C YIL102CP40488 101 aa5.96□□□□□ -1.46
SSL2YIL143C YHR007C-AQ07074 71 aa5.95□□□□□ -1.46
SSL2YIL143C YDR182W-AQ3E796 67 aa5.95□□□□□ -1.46
SSL2YIL143C BSC4P53841 131 aa5.94□□□□□ -1.46
SSL2YIL143C ECM19Q06011 112 aa5.94□□□□□ -1.46
SSL2YIL143C YML100W-AQ8TGT0 57 aa5.93□□□□□ -1.46
SSL2YIL143C YHL005CP38752 130 aa5.93□□□□□ -1.46
SSL2YIL143C NUM1Q00402 2748 aa5.93□□□□□ -1.46
SSL2YIL143C YCL042WP25572 119 aa5.92□□□□□ -1.46
SSL2YIL143C DDR2P89113 61 aa5.92□□□□□ -1.46
SSL2YIL143C LIP1Q03579 150 aa5.91□□□□□ -1.46
SSL2YIL143C YEL045CP32616 141 aa5.9□□□□□ -1.46
SSL2YIL143C YOR072WQ08486 104 aa5.9□□□□□ -1.46
SSL2YIL143C RPS30AP0CX33 63 aaKnown RBP5.9□□□□□ -1.47
SSL2YIL143C RPS30BP0CX34 63 aaKnown RBP5.9□□□□□ -1.47
SSL2YIL143C YGL041C-BQ3E750 60 aa5.9□□□□□ -1.47
SSL2YIL143C YBL008W-AQ3E821 79 aa5.9□□□□□ -1.47
SSL2YIL143C YLR162WQ06235 118 aa5.89□□□□□ -1.47
SSL2YIL143C GIS2P53849 153 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
SSL2YIL143C YOR268CQ08734 132 aa5.88□□□□□ -1.47
SSL2YIL143C YGR121W-AQ3E816 71 aa5.87□□□□□ -1.47
SSL2YIL143C YOR381W-AQ3E804 55 aa5.84□□□□□ -1.47
SSL2YIL143C YLR122CQ12312 125 aa5.84□□□□□ -1.47
SSL2YIL143C YMR230W-AQ3E7B5 62 aa5.84□□□□□ -1.47
SSL2YIL143C HOT13P36078 116 aa5.83□□□□□ -1.48
SSL2YIL143C SAP30P38429 201 aa5.83□□□□□ -1.48
SSL2YIL143C YOL013W-AP0C272 63 aaPredicted RBP5.82□□□□□ -1.48
SSL2YIL143C AUA1P32450 94 aa5.82□□□□□ -1.48
SSL2YIL143C YAR064WP39563 99 aa5.8□□□□□ -1.48
SSL2YIL143C YJL197C-AP0C5P0 93 aa5.77□□□□□ -1.49
SSL2YIL143C YMR122CQ03879 124 aa5.76□□□□□ -1.49
SSL2YIL143C YCR043CP25361 127 aa5.75□□□□□ -1.49
SSL2YIL143C CUP1-1P0CX80 61 aa5.74□□□□□ -1.49
SSL2YIL143C CUP1-2P0CX81 61 aa5.74□□□□□ -1.49
SSL2YIL143C YDR010CQ12426 110 aa5.74□□□□□ -1.49
SSL2YIL143C YDR034C-AP0C289 58 aa5.72□□□□□ -1.49
SSL2YIL143C YPR195CQ06594 109 aa5.72□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms