RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 L1RE1Q9UN81 338 aa8.18□□□□□ -1.1
PDPN-205ENST00000487038 R3HCC1Q9Y3T6 440 aaKnown RBP8.18□□□□□ -1.1
PDPN-205ENST00000487038 NFE2L3Q9Y4A8 694 aa8.18□□□□□ -1.1
PDPN-205ENST00000487038 PCDHB6Q9Y5E3 794 aa8.18□□□□□ -1.1
PDPN-205ENST00000487038 RAI2Q9Y5P3 530 aa8.18□□□□□ -1.1
PDPN-205ENST00000487038 MGAQ8IWI9 3026 aa8.18□□□□□ -1.1
PDPN-205ENST00000487038 KNL1Q8NG31 2342 aa8.18□□□□□ -1.1
PDPN-205ENST00000487038 E2F8A0AVK6 867 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 TRABD2BA6NFA1 517 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 PP2D1A8MPX8 630 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 RRP8O43159 456 aaKnown RBP8.17□□□□□ -1.1
PDPN-205ENST00000487038 TRAK2O60296 914 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 OLFM2O95897 454 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 ABL1P00519 1130 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 ITGB3P05106 788 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 MBL2P11226 248 aaPredicted RBP8.17□□□□□ -1.1
PDPN-205ENST00000487038 CHRM1P11229 460 aaPredicted RBP8.17□□□□□ -1.1
PDPN-205ENST00000487038 NDUFV2P19404 249 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 CD6P30203 668 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 POLR2BP30876 1174 aaKnown RBP8.17□□□□□ -1.1
PDPN-205ENST00000487038 HNF1BP35680 557 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 SLC12A3P55017 1021 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 ANAPC15P60006 121 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 ZXDBP98169 803 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 INAVAQ3KP66 663 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 HYIQ5T013 277 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 RHBDF2Q6PJF5 856 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 KCNK18Q7Z418 384 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 SFTPA1Q8IWL2 248 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 ADGRF2Q8IZF7 708 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 MYCT1Q8N699 235 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 TOP6BLQ8N6T0 577 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 LRRC52Q8N7C0 313 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 C4orf32Q8N8J7 132 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 BAHD1Q8TBE0 780 aaPredicted RBP8.17□□□□□ -1.1
PDPN-205ENST00000487038 RHBDD1Q8TEB9 315 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 IPO4Q8TEX9 1081 aaKnown RBP8.17□□□□□ -1.1
PDPN-205ENST00000487038 LRRC15Q8TF66 581 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 CACTINQ8WUQ7 758 aaKnown RBP8.17□□□□□ -1.1
PDPN-205ENST00000487038 SCFD1Q8WVM8 642 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 BAP1Q92560 729 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 GAREM1Q9H706 876 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 SMPD4Q9NXE4 827 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 CFAP97Q9P2B7 532 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 AGO2Q9UKV8 859 aaKnown RBP8.17□□□□□ -1.1
PDPN-205ENST00000487038 SH3BP1Q9Y3L3 701 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 STARD13Q9Y3M8 1113 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 PCDHGB2Q9Y5G2 931 aa8.17□□□□□ -1.1
PDPN-205ENST00000487038 PIEZO2Q9H5I5 2752 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 TEX51A0A1B0GUA7 166 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 ZNF840PA6NDX5 716 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 GOLGA8CPA6NN73 597 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 J3QKU1 62 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 TULP1O00294 542 aaPredicted RBP8.16□□□□□ -1.1
PDPN-205ENST00000487038 HOXC11O43248 304 aaPredicted RBP8.16□□□□□ -1.1
PDPN-205ENST00000487038 TBCAO75347 108 aaKnown RBP8.16□□□□□ -1.1
PDPN-205ENST00000487038 TULP3O75386 442 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 C1QL1O75973 258 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 OAS1P00973 400 aaKnown RBP8.16□□□□□ -1.1
PDPN-205ENST00000487038 KRT18P05783 430 aaKnown RBP8.16□□□□□ -1.1
PDPN-205ENST00000487038 KRT19P08727 400 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 PLA2G4BP0C869 781 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 NOP14P78316 857 aaKnown RBP8.16□□□□□ -1.1
PDPN-205ENST00000487038 TFAMQ00059 246 aaKnown RBP8.16□□□□□ -1.1
PDPN-205ENST00000487038 CYP27A1Q02318 531 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 MESP2Q0VG99 397 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 CKAP5Q14008 2032 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 STARD3Q14849 445 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 MYLKQ15746 1914 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 ANO4Q32M45 955 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 LY6G5CQ5SRR4 150 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 C6orf118Q5T5N4 469 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 TDRD10Q5VZ19 366 aaKnown RBP8.16□□□□□ -1.1
PDPN-205ENST00000487038 GRAMD4Q6IC98 578 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 SLC39A4Q6P5W5 647 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 KIAA1324Q6UXG2 1013 aaKnown RBP8.16□□□□□ -1.1
PDPN-205ENST00000487038 ETFBKMTQ8IXQ9 262 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 PHTF2Q8N3S3 785 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 ZCCHC9Q8N567 271 aaKnown RBP8.16□□□□□ -1.1
PDPN-205ENST00000487038 NAT16Q8N8M0 369 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 FAM184AQ8NB25 1140 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 PDZD8Q8NEN9 1154 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 POMGNT1Q8WZA1 660 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 USP9XQ93008 2570 aaPredicted RBP8.16□□□□□ -1.1
PDPN-205ENST00000487038 MYLPFQ96A32 169 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 CRELD1Q96HD1 420 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 FCRL3Q96P31 734 aaPredicted RBP8.16□□□□□ -1.1
PDPN-205ENST00000487038 XPO6Q96QU8 1125 aaKnown RBP8.16□□□□□ -1.1
PDPN-205ENST00000487038 PKMYT1Q99640 499 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 SYT15Q9BQS2 421 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 REEP2Q9BRK0 252 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 TTLL2Q9BWV7 592 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 MIR1-1HGQ9H1L0 117 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 PRDM16Q9HAZ2 1276 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 GDAP2Q9NXN4 497 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 ITGA11Q9UKX5 1188 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 CDH9Q9ULB4 789 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 AGAP1Q9UPQ3 857 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 SNX9Q9Y5X1 595 aa8.16□□□□□ -1.1
PDPN-205ENST00000487038 FLNCQ14315 2725 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 214.6 ms