RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 ADRA1DP25100 572 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 EPHB2P29323 1055 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 RPL22P35268 128 aaKnown RBP8.79□□□□□ -1
PTPRK-206ENST00000368215 PGM1P36871 562 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 GRIK1P39086 918 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 C4orf50Q6ZRC1 276 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 ADGRF2Q8IZF7 708 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 OR6P1Q8NGX9 317 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 NTPCRQ9BSD7 190 aaKnown RBP8.79□□□□□ -1
PTPRK-206ENST00000368215 WWP1Q9H0M0 922 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 KDM4CQ9H3R0 1056 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 GRHL1Q9NZI5 618 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 IPO11Q9UI26 975 aaKnown RBP8.79□□□□□ -1
PTPRK-206ENST00000368215 ITGA11Q9UKX5 1188 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 MYH15Q9Y2K3 1946 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 hCG_1818297A0A087WSY0 165 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 SOWAHBA6NEL2 793 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 NEMP1O14524 444 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 SPAG6O75602 509 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 PAEPP09466 180 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 CREB1P16220 341 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 YY1P25490 414 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 ARL2P36404 184 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 PEX5P50542 639 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 BCAT1P54687 386 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 MAP3K7CLP57077 242 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 FSTL1Q12841 308 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 PDK1Q15118 436 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 PDK2Q15119 407 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 ITPRIPL1Q6GPH6 555 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 MTDHQ86UE4 582 aaKnown RBP8.79□□□□□ -1
PTPRK-206ENST00000368215 NLGN2Q8NFZ4 835 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 GBP5Q96PP8 586 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 FIZ1Q96SL8 496 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 GPR20Q99678 358 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 RNPEPQ9H4A4 650 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 GTSE1Q9NYZ3 720 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 TNFSF13BQ9Y275 285 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 COQ4Q9Y3A0 265 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 RPTORQ8N122 1335 aa8.79□□□□□ -1
PTPRK-206ENST00000368215 SHOX2O60902 331 aaPredicted RBP8.78□□□□□ -1
PTPRK-206ENST00000368215 B3GAT3O94766 335 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 LUC7L3O95232 432 aaKnown RBP8.78□□□□□ -1
PTPRK-206ENST00000368215 RPA3P35244 121 aaPredicted RBP8.78□□□□□ -1
PTPRK-206ENST00000368215 CDC42EP1Q00587 391 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 SPDYCQ5MJ68 293 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 PLEKHA7Q6IQ23 1121 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 ALLCQ8N6M5 410 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 SLC2A14Q8TDB8 520 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 TFAP2BQ92481 460 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 DDX27Q96GQ7 796 aaKnown RBP8.78□□□□□ -1
PTPRK-206ENST00000368215 CPXM1Q96SM3 734 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 SLC24A2Q9UI40 661 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 TMEM59LQ9UK28 342 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 LRFN2Q9ULH4 789 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 MAFBQ9Y5Q3 323 aaPredicted RBP8.78□□□□□ -1
PTPRK-206ENST00000368215 RPS6KL1Q9Y6S9 549 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 APOC4-APOC2K7ER74 178 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 SMAPO00193 183 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 MAP3K7O43318 606 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 VNN1O95497 513 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 APOC2P02655 101 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 HMBSP08397 361 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 FAAP100Q0VG06 881 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 DPYSL3Q14195 570 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 FASTKD1Q53R41 847 aaKnown RBP8.78□□□□□ -1
PTPRK-206ENST00000368215 FAM183BPQ6ZVS7 135 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.78□□□□□ -1
PTPRK-206ENST00000368215 TMEM237Q96Q45 408 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 UBP1Q9NZI7 540 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 NAV1Q8NEY1 1877 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 LOC100653049A0A140TA62 436 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 B2RBV5 119 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 SNX3O60493 162 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 KRT34O76011 436 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 RECQL4O94761 1208 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 ARF4P18085 180 aaPredicted RBP8.78□□□□□ -1
PTPRK-206ENST00000368215 ZNF280AP59817 542 aaPredicted RBP8.78□□□□□ -1
PTPRK-206ENST00000368215 COG7P83436 770 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 ADIGQ0VDE8 80 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 ART3Q13508 389 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 FASTKD3Q14CZ7 662 aaKnown RBP8.78□□□□□ -1
PTPRK-206ENST00000368215 PCSK7Q16549 785 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 GRAMD1BQ3KR37 738 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 ZC3H12AQ5D1E8 599 aaKnown RBP8.78□□□□□ -1
PTPRK-206ENST00000368215 KIAA1841Q6NSI8 718 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 CES3Q6UWW8 571 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 ZDHHC24Q6UX98 284 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 UNC45BQ8IWX7 931 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 SLCO1B3Q9NPD5 702 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 STOML1Q9UBI4 398 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 KPNA7A9QM74 516 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 KCNK1O00180 336 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 PMLP29590 882 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 MMP13P45452 471 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 GTF2A2P52657 109 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 SH2D4BQ5SQS7 431 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 AGGF1Q8N302 714 aaeCLIP8.78□□□□□ -1
PTPRK-206ENST00000368215 IPMKQ8NFU5 416 aa8.78□□□□□ -1
PTPRK-206ENST00000368215 LMO3Q8TAP4 145 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms