RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 USP29Q9HBJ7 922 aa18.42■□□□□ 0.54
CDKN1B-201ENST00000228872 ARHGAP42A6NI28 874 aa18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 DDNO94850 711 aaPredicted RBP18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 SNRPFP62306 86 aaKnown RBP18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 UBXN2AP68543 259 aa18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 SFSWAPQ12872 951 aaKnown RBP18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 UBAP2LQ14157 1087 aaKnown RBP18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 CES4AQ5XG92 561 aa18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 SV2AQ7L0J3 742 aa18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 PASD1Q8IV76 773 aa18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 SLC26A7Q8TE54 656 aa18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 SRPK1Q96SB4 655 aaKnown RBP18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 ZNF395Q9H8N7 513 aaPredicted RBP18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 hCG_1818297A0A087WSY0 165 aa18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 RPL5P46777 297 aaKnown RBP18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 TMPRSS15P98073 1019 aa18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 CHURC1Q8WUH1 139 aa18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 SLC44A1Q8WWI5 657 aa18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 POMGNT1Q8WZA1 660 aa18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 ZNF577Q9BSK1 485 aa18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 GLIS2Q9BZE0 524 aaPredicted RBP18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 SMYD3Q9H7B4 428 aa18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 ADARB2Q9NS39 739 aaKnown RBP18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 MARCOQ9UEW3 520 aaPredicted RBP18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 SCINQ9Y6U3 715 aa18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 IVNS1ABPQ9Y6Y0 642 aa18.41■□□□□ 0.54
CDKN1B-201ENST00000228872 TCRBV7S3A2A0A539 114 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 COPEO14579 308 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 SLC16A4O15374 487 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 CCNT2O60583 730 aaKnown RBP18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 C6orf222P0C671 652 aaPredicted RBP18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 KITP10721 976 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 SLC25A3Q00325 362 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 DBN1Q16643 649 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 KLHDC10Q6PID8 442 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 B3GNT9Q6UX72 402 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 FAM160B2Q86V87 743 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 SLC35B2Q8TB61 432 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 FEZF2Q8TBJ5 459 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 IRGQQ8WZA9 623 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 IQCGQ9H095 443 aaKnown RBP18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 IKBKGQ9Y6K9 419 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 STK10O94804 968 aaKnown RBP18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 TFAP2AP05549 437 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 SERPINA6P08185 405 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 INHBAP08476 426 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 ARP10275 920 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 TSHRP16473 764 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 GDF10P55107 478 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 NOMO3P69849 1222 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 CDK18Q07002 472 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 MTMR2Q13614 643 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 TRIP10Q15642 601 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 ATG16L1Q676U5 607 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 ILDR2Q71H61 639 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 TRIM42Q8IWZ5 723 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 TAB3Q8N5C8 712 aaPredicted RBP18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 E2F7Q96AV8 911 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 TEKT3Q9BXF9 490 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 C10orf88Q9H8K7 445 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 IP6K2Q9UHH9 426 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 FEM1BQ9UK73 627 aa18.4■□□□□ 0.54
CDKN1B-201ENST00000228872 SSC5DA1L4H1 1573 aa18.39■□□□□ 0.54
CDKN1B-201ENST00000228872 TMEM63AO94886 807 aa18.39■□□□□ 0.54
CDKN1B-201ENST00000228872 SSTR3P32745 418 aaPredicted RBP18.39■□□□□ 0.54
CDKN1B-201ENST00000228872 GTF2H1P32780 548 aa18.39■□□□□ 0.54
CDKN1B-201ENST00000228872 FOLH1Q04609 750 aa18.39■□□□□ 0.54
CDKN1B-201ENST00000228872 SULT2A1Q06520 285 aa18.39■□□□□ 0.54
CDKN1B-201ENST00000228872 TEX44Q53QW1 395 aa18.39■□□□□ 0.54
CDKN1B-201ENST00000228872 C9orf131Q5VYM1 1079 aa18.39■□□□□ 0.54
CDKN1B-201ENST00000228872 TMC2Q8TDI7 906 aa18.39■□□□□ 0.54
CDKN1B-201ENST00000228872 ACSF2Q96CM8 615 aaPredicted RBP18.39■□□□□ 0.54
CDKN1B-201ENST00000228872 RILPQ96NA2 401 aa18.39■□□□□ 0.54
CDKN1B-201ENST00000228872 BTBD9Q96Q07 612 aa18.39■□□□□ 0.54
CDKN1B-201ENST00000228872 SSX2IPQ9Y2D8 614 aa18.39■□□□□ 0.54
CDKN1B-201ENST00000228872 PARP14Q460N5 1801 aa18.39■□□□□ 0.53
CDKN1B-201ENST00000228872 CCDC195A0A1B0GUA6 201 aa18.39■□□□□ 0.53
CDKN1B-201ENST00000228872 CFBP00751 764 aa18.39■□□□□ 0.53
CDKN1B-201ENST00000228872 ATP5BP06576 529 aaKnown RBP18.39■□□□□ 0.53
CDKN1B-201ENST00000228872 AOC1P19801 751 aa18.39■□□□□ 0.53
CDKN1B-201ENST00000228872 ZNF200P98182 395 aaPredicted RBP18.39■□□□□ 0.53
CDKN1B-201ENST00000228872 IGDCC3Q8IVU1 814 aa18.39■□□□□ 0.53
CDKN1B-201ENST00000228872 LPAR1Q92633 364 aa18.39■□□□□ 0.53
CDKN1B-201ENST00000228872 FAM84AQ96KN4 292 aa18.39■□□□□ 0.53
CDKN1B-201ENST00000228872 SENP7Q9BQF6 1050 aa18.39■□□□□ 0.53
CDKN1B-201ENST00000228872 ST6GALNAC4Q9H4F1 302 aa18.39■□□□□ 0.53
CDKN1B-201ENST00000228872 DDX18Q9NVP1 670 aaKnown RBP18.39■□□□□ 0.53
CDKN1B-201ENST00000228872 CDK4P11802 303 aa18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 PTPN7P35236 360 aa18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 CHI3L2Q15782 390 aa18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 KBTBD12Q3ZCT8 623 aa18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 CEP55Q53EZ4 464 aa18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 C1orf228Q6PIY5 440 aa18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 JADE3Q92613 823 aa18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 VCPIP1Q96JH7 1222 aa18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 RBM38Q9H0Z9 239 aaKnown RBP18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 C1orf112Q9NSG2 853 aa18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 HBS1LQ9Y450 684 aaKnown RBP18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 ZHX2Q9Y6X8 837 aa18.38■□□□□ 0.53
CDKN1B-201ENST00000228872 PAPPA2Q9BXP8 1791 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 181.8 ms