RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 ELC1Q03071 99 aa-5.54□□□□□ -3.3
snR40snR40 CSN9Q03981 162 aa-5.54□□□□□ -3.3
snR40snR40 YDR029WQ12111 104 aa-5.54□□□□□ -3.3
snR40snR40 YLL006W-AQ3E814 58 aa-5.54□□□□□ -3.3
snR40snR40 APS2Q00381 147 aa-5.55□□□□□ -3.3
snR40snR40 PBI2P0CT04 75 aaKnown RBP-5.56□□□□□ -3.3
snR40snR40 DAD1Q12248 94 aa-5.56□□□□□ -3.3
snR40snR40 YCR095W-AQ3E787 52 aa-5.57□□□□□ -3.3
snR40snR40 YOR072W-BQ3E832 53 aa-5.57□□□□□ -3.3
snR40snR40 YBL071CP38185 102 aa-5.58□□□□□ -3.3
snR40snR40 PAU4P53427 120 aa-5.58□□□□□ -3.3
snR40snR40 RPL14BP38754 138 aaKnown RBP-5.59□□□□□ -3.3
snR40snR40 TVP18Q04767 167 aa-5.59□□□□□ -3.3
snR40snR40 YHR214C-DP0CX93 97 aa-5.6□□□□□ -3.31
snR40snR40 BSC4P53841 131 aa-5.6□□□□□ -3.31
snR40snR40 YMR122W-AQ3E842 84 aa-5.6□□□□□ -3.31
snR40snR40 YLR419WQ06698 1435 aaKnown RBP-5.6□□□□□ -3.31
snR40snR40 TY3B-IQ7LHG5 1498 aaKnown RBP-5.6□□□□□ -3.31
snR40snR40 PAU16P35994 123 aa-5.61□□□□□ -3.31
snR40snR40 TRA1P38811 3744 aa-5.61□□□□□ -3.31
snR40snR40 YOR376W-AQ3E805 51 aa-5.61□□□□□ -3.31
snR40snR40 SRB6P32570 121 aa-5.62□□□□□ -3.31
snR40snR40 YDR119W-AQ2V2P9 66 aa-5.62□□□□□ -3.31
snR40snR40 YDR524C-BQ3E6R4 66 aa-5.62□□□□□ -3.31
snR40snR40 YGL258W-AQ3E740 77 aa-5.65□□□□□ -3.31
snR40snR40 GIM5Q04493 163 aa-5.66□□□□□ -3.32
snR40snR40 SPC3Q12133 184 aa-5.66□□□□□ -3.32
snR40snR40 RPS27AP35997 82 aaKnown RBP-5.67□□□□□ -3.32
snR40snR40 YOR289WQ12012 251 aaPredicted RBP-5.67□□□□□ -3.32
snR40snR40 COA2Q3E823 68 aa-5.67□□□□□ -3.32
snR40snR40 POP7P38291 140 aa-5.68□□□□□ -3.32
snR40snR40 TDA2P40045 126 aa-5.68□□□□□ -3.32
snR40snR40 YDR366CP87287 132 aa-5.68□□□□□ -3.32
snR40snR40 YLR053CQ12026 108 aa-5.68□□□□□ -3.32
snR40snR40 IRA2P19158 3079 aa-5.7□□□□□ -3.32
snR40snR40 YOR343CQ12484 108 aa-5.7□□□□□ -3.32
snR40snR40 BPT1P14772 1559 aa-5.71□□□□□ -3.32
snR40snR40 YIP3P53633 176 aa-5.71□□□□□ -3.32
snR40snR40 YAL065CO13511 128 aa-5.72□□□□□ -3.33
snR40snR40 EMC5P40540 141 aa-5.74□□□□□ -3.33
snR40snR40 SPC24Q04477 213 aa-5.76□□□□□ -3.33
snR40snR40 Q0017Q9ZZX8 53 aa-5.76□□□□□ -3.33
snR40snR40 YGR039WP53225 103 aa-5.77□□□□□ -3.33
snR40snR40 INO80P53115 1489 aa-5.77□□□□□ -3.33
snR40snR40 OLI1P61829 76 aa-5.78□□□□□ -3.33
snR40snR40 YMR320WQ04897 101 aa-5.79□□□□□ -3.34
snR40snR40 JIP3O13555 125 aa-5.8□□□□□ -3.34
snR40snR40 YNL277W-AQ3E7Z0 62 aa-5.81□□□□□ -3.34
snR40snR40 IRC20Q06554 1556 aa-5.81□□□□□ -3.34
snR40snR40 FIG2P25653 1609 aa-5.81□□□□□ -3.34
snR40snR40 PAU5P43575 122 aa-5.82□□□□□ -3.34
snR40snR40 SPC1P46965 94 aa-5.82□□□□□ -3.34
snR40snR40 ATP7P30902 174 aa-5.83□□□□□ -3.34
snR40snR40 YOL097W-AQ3E7Y9 61 aa-5.83□□□□□ -3.34
snR40snR40 POC4Q12245 148 aaPredicted RBP-5.84□□□□□ -3.34
snR40snR40 UBC4P15731 148 aa-5.85□□□□□ -3.35
snR40snR40 BUD23P25627 275 aaPredicted RBP-5.85□□□□□ -3.35
snR40snR40 SMC4Q12267 1418 aa-5.87□□□□□ -3.35
snR40snR40 MRP49P32388 137 aa-5.87□□□□□ -3.35
snR40snR40 NHP10Q03435 203 aa-5.87□□□□□ -3.35
snR40snR40 YLR365WQ7LIF2 110 aa-5.87□□□□□ -3.35
snR40snR40 SAE3P89114 91 aa-5.89□□□□□ -3.35
snR40snR40 Q0144Q9ZZW2 109 aa-5.9□□□□□ -3.35
snR40snR40 VPS15P22219 1454 aa-5.9□□□□□ -3.35
snR40snR40 YOS1Q3E834 85 aa-5.92□□□□□ -3.36
snR40snR40 RPB4P20433 221 aaPredicted RBP-5.93□□□□□ -3.36
snR40snR40 VMA21P41806 77 aa-5.93□□□□□ -3.36
snR40snR40 TY3B-GQ99315 1547 aa-5.94□□□□□ -3.36
snR40snR40 LSM2P38203 95 aaKnown RBP-5.94□□□□□ -3.36
snR40snR40 SMD2Q06217 110 aaKnown RBP-5.94□□□□□ -3.36
snR40snR40 SCP1Q08873 200 aa-5.94□□□□□ -3.36
snR40snR40 KRE5P22023 1365 aa-5.94□□□□□ -3.36
snR40snR40 ATG38Q05789 226 aaKnown RBP-5.95□□□□□ -3.36
snR40snR40 ATP17Q06405 101 aa-5.95□□□□□ -3.36
snR40snR40 UTP10P42945 1769 aaKnown RBP-5.96□□□□□ -3.36
snR40snR40 SFT1P43682 97 aa-5.97□□□□□ -3.37
snR40snR40 XRN1P22147 1528 aaKnown RBP-5.99□□□□□ -3.37
snR40snR40 APC1P53886 1748 aa-5.99□□□□□ -3.37
snR40snR40 YOR394C-AQ8TGJ0 55 aa-5.99□□□□□ -3.37
snR40snR40 PDR10P51533 1564 aa-6□□□□□ -3.37
snR40snR40 FPR2P32472 135 aa-6□□□□□ -3.37
snR40snR40 NHP2P32495 156 aaPredicted RBP-6.01□□□□□ -3.37
snR40snR40 LHP1P33399 275 aaKnown RBP-6.02□□□□□ -3.37
snR40snR40 YMR103CQ04436 120 aa-6.02□□□□□ -3.37
snR40snR40 YHL005CP38752 130 aa-6.04□□□□□ -3.38
snR40snR40 CGR1P53188 120 aa-6.04□□□□□ -3.38
snR40snR40 YOR192C-CQ3E736 78 aa-6.04□□□□□ -3.38
snR40snR40 RBL2P48606 106 aaKnown RBP-6.06□□□□□ -3.38
snR40snR40 MYO2P19524 1574 aaKnown RBP-6.07□□□□□ -3.38
snR40snR40 YOR1P53049 1477 aa-6.08□□□□□ -3.38
snR40snR40 KOG1P38873 1557 aa-6.08□□□□□ -3.38
snR40snR40 RPS27BP38711 82 aa-6.08□□□□□ -3.38
snR40snR40 PAU23Q07987 124 aa-6.08□□□□□ -3.38
snR40snR40 PAU17Q12370 124 aa-6.08□□□□□ -3.38
snR40snR40 YKL068W-AQ3E826 78 aa-6.08□□□□□ -3.38
snR40snR40 SWC7Q06707 132 aa-6.09□□□□□ -3.38
snR40snR40 GNA1P43577 159 aaPredicted RBP-6.11□□□□□ -3.39
snR40snR40 SPC2Q04969 178 aa-6.11□□□□□ -3.39
snR40snR40 YGR146C-AQ8TGT9 53 aa-6.12□□□□□ -3.39
snR40snR40 YAR029WP39549 74 aa-6.13□□□□□ -3.39
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms