RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W YLR363W-AQ3E747 85 aa10.02□□□□□ -0.81
SHR5YOL110W UGX2P32772 223 aa10.01□□□□□ -0.81
SHR5YOL110W YFR057WP43625 151 aa10.01□□□□□ -0.81
SHR5YOL110W ELC1Q03071 99 aa10.01□□□□□ -0.81
SHR5YOL110W YNL190WP53872 204 aa10□□□□□ -0.81
SHR5YOL110W MDN1Q12019 4910 aaKnown RBP10□□□□□ -0.81
SHR5YOL110W CDC43P18898 376 aa9.98□□□□□ -0.81
SHR5YOL110W CWP2P43497 92 aa9.98□□□□□ -0.81
SHR5YOL110W SNA2P56508 79 aa9.98□□□□□ -0.81
SHR5YOL110W CWC27Q02770 301 aa9.97□□□□□ -0.81
SHR5YOL110W AQY2P0CD90 149 aa9.94□□□□□ -0.82
SHR5YOL110W ABF2Q02486 183 aa9.94□□□□□ -0.82
SHR5YOL110W MRP10O75012 95 aa9.93□□□□□ -0.82
SHR5YOL110W SMD1Q02260 146 aaPredicted RBP9.93□□□□□ -0.82
SHR5YOL110W YDR029WQ12111 104 aa9.93□□□□□ -0.82
SHR5YOL110W YLL006W-AQ3E814 58 aa9.93□□□□□ -0.82
SHR5YOL110W MBF1O14467 151 aaKnown RBP9.92□□□□□ -0.82
SHR5YOL110W YDR034C-AP0C289 58 aa9.92□□□□□ -0.82
SHR5YOL110W MID2P36027 376 aa9.92□□□□□ -0.82
SHR5YOL110W YPL229WQ99395 206 aa9.91□□□□□ -0.82
SHR5YOL110W MVB12P42939 101 aa9.89□□□□□ -0.83
SHR5YOL110W UBC11P52492 156 aa9.89□□□□□ -0.83
SHR5YOL110W YER181CP40097 107 aa9.88□□□□□ -0.83
SHR5YOL110W PAI3P01094 68 aa9.86□□□□□ -0.83
SHR5YOL110W YBL039W-BP0C268 59 aa9.85□□□□□ -0.83
SHR5YOL110W YIA6P40556 373 aa9.85□□□□□ -0.83
SHR5YOL110W GAT4P40569 121 aa9.85□□□□□ -0.83
SHR5YOL110W YFL019CP43576 117 aa9.85□□□□□ -0.83
SHR5YOL110W YKL023C-AQ2V2P3 75 aa9.84□□□□□ -0.83
SHR5YOL110W LCL2Q08045 131 aa9.83□□□□□ -0.84
SHR5YOL110W YGL041C-BQ3E750 60 aa9.83□□□□□ -0.84
SHR5YOL110W HPA2Q06592 156 aa9.82□□□□□ -0.84
SHR5YOL110W YOR020W-AQ3E824 90 aa9.82□□□□□ -0.84
SHR5YOL110W YLR296WQ05898 108 aa9.81□□□□□ -0.84
SHR5YOL110W RPL29P05747 59 aaPredicted RBP9.8□□□□□ -0.84
SHR5YOL110W SMP1P38128 452 aa9.8□□□□□ -0.84
SHR5YOL110W YHR130CP38834 111 aa9.8□□□□□ -0.84
SHR5YOL110W RGM1Q00453 211 aa9.8□□□□□ -0.84
SHR5YOL110W Q0032Q9ZZX7 96 aa9.8□□□□□ -0.84
SHR5YOL110W STF1P01098 86 aa9.79□□□□□ -0.84
SHR5YOL110W ECM12O13529 151 aa9.78□□□□□ -0.84
SHR5YOL110W POP7P38291 140 aa9.78□□□□□ -0.84
SHR5YOL110W PEX22P39718 180 aa9.78□□□□□ -0.84
SHR5YOL110W NHP2P32495 156 aaPredicted RBP9.77□□□□□ -0.85
SHR5YOL110W ARO2P28777 376 aaKnown RBP9.76□□□□□ -0.85
SHR5YOL110W UIP3P39547 235 aa9.76□□□□□ -0.85
SHR5YOL110W AIM19P40502 157 aa9.76□□□□□ -0.85
SHR5YOL110W LSM6Q06406 86 aaKnown RBP9.76□□□□□ -0.85
SHR5YOL110W MHR1Q06630 226 aa9.76□□□□□ -0.85
SHR5YOL110W COX10P21592 462 aa9.75□□□□□ -0.85
SHR5YOL110W YIL102C-AQ2V2P5 75 aa9.75□□□□□ -0.85
SHR5YOL110W KNH1P50112 268 aa9.74□□□□□ -0.85
SHR5YOL110W IGD1P43598 195 aa9.73□□□□□ -0.85
SHR5YOL110W EOS1P53938 366 aa9.73□□□□□ -0.85
SHR5YOL110W MET32Q12041 191 aa9.73□□□□□ -0.85
SHR5YOL110W CPR1P14832 162 aaKnown RBP9.72□□□□□ -0.85
SHR5YOL110W YPR170W-BP0C5R9 85 aa9.71□□□□□ -0.86
SHR5YOL110W UBC4P15731 148 aa9.69□□□□□ -0.86
SHR5YOL110W IRC21Q04772 201 aa9.69□□□□□ -0.86
SHR5YOL110W RPL26AP05743 127 aaKnown RBP9.68□□□□□ -0.86
SHR5YOL110W RPL26BP53221 127 aaKnown RBP9.68□□□□□ -0.86
SHR5YOL110W ICY1Q04329 127 aa9.67□□□□□ -0.86
SHR5YOL110W YNL198CP40166 100 aa9.66□□□□□ -0.86
SHR5YOL110W YNL162W-AQ3E7A8 72 aa9.66□□□□□ -0.86
SHR5YOL110W YLR307C-AQ3E825 87 aa9.65□□□□□ -0.86
SHR5YOL110W MRPL24P36525 258 aaPredicted RBP9.63□□□□□ -0.87
SHR5YOL110W LCL1Q02786 101 aa9.63□□□□□ -0.87
SHR5YOL110W YOR034C-AQ3E735 80 aa9.63□□□□□ -0.87
SHR5YOL110W HUR1P45820 110 aa9.62□□□□□ -0.87
SHR5YOL110W YGL193CP53097 103 aa9.59□□□□□ -0.87
SHR5YOL110W GIS2P53849 153 aaKnown RBP RIP-Chip data9.59□□□□□ -0.87not detected
SHR5YOL110W HYP2P23301 157 aaKnown RBP9.58□□□□□ -0.88
SHR5YOL110W ISU2Q12056 156 aa9.58□□□□□ -0.88
SHR5YOL110W TMA7Q3E764 64 aaKnown RBP9.57□□□□□ -0.88
SHR5YOL110W YBR230W-AQ3E762 66 aa9.55□□□□□ -0.88
SHR5YOL110W YNL042W-BQ3E7Z2 85 aa9.55□□□□□ -0.88
SHR5YOL110W YLR236CA0A023PZG4 107 aa9.54□□□□□ -0.88
SHR5YOL110W YJL127C-BQ3E828 52 aa9.53□□□□□ -0.88
SHR5YOL110W YER039C-AP0CD97 72 aa9.52□□□□□ -0.89
SHR5YOL110W MMS2P53152 137 aa9.52□□□□□ -0.89
SHR5YOL110W YPL257WQ08974 193 aa9.52□□□□□ -0.89
SHR5YOL110W FYV5P25585 152 aa9.51□□□□□ -0.89
SHR5YOL110W MSA2P36157 363 aa9.48□□□□□ -0.89
SHR5YOL110W MPC3P53311 146 aa9.48□□□□□ -0.89
SHR5YOL110W DDR2P89113 61 aa9.48□□□□□ -0.89
SHR5YOL110W SPT4P32914 102 aaPredicted RBP9.46□□□□□ -0.9
SHR5YOL110W DUT1P33317 147 aa9.46□□□□□ -0.9
SHR5YOL110W YLR156WP0CE96 114 aa9.43□□□□□ -0.9
SHR5YOL110W YLR159WP0CE97 114 aa9.43□□□□□ -0.9
SHR5YOL110W YLR161WP0CE98 114 aa9.43□□□□□ -0.9
SHR5YOL110W DSE2P38844 325 aa9.41□□□□□ -0.9
SHR5YOL110W YBL112CQ3E7Y4 105 aa9.41□□□□□ -0.9
SHR5YOL110W YLR415CO13578 112 aa9.39□□□□□ -0.91
SHR5YOL110W SFT1P43682 97 aa9.39□□□□□ -0.91
SHR5YOL110W BET1P22804 142 aa9.38□□□□□ -0.91
SHR5YOL110W YJR107C-AP0CT86 78 aa9.36□□□□□ -0.91
SHR5YOL110W BSC4P53841 131 aa9.35□□□□□ -0.91
SHR5YOL110W EDC2P40023 145 aaPredicted RBP9.34□□□□□ -0.91
SHR5YOL110W TSC3Q3E790 80 aa9.33□□□□□ -0.92
SHR5YOL110W YHR007C-AQ07074 71 aa9.32□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms