RNA–Protein interactions for RNA: YJR102C

VPS25, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS25, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS25YJR102C SGF11Q03067 99 aa0.31□□□□□ -2.36
VPS25YJR102C YPL225WQ08971 146 aaKnown RBP0.31□□□□□ -2.36
VPS25YJR102C YDR029WQ12111 104 aa0.31□□□□□ -2.36
VPS25YJR102C YRF1-2P40105 1681 aa0.3□□□□□ -2.36
VPS25YJR102C TY1B-BLQ12490 1755 aa0.3□□□□□ -2.36
VPS25YJR102C BSC4P53841 131 aa0.3□□□□□ -2.36
VPS25YJR102C YCL001W-BQ96VH2 84 aa0.3□□□□□ -2.36
VPS25YJR102C YFR009W-AP0C5M9 85 aa0.29□□□□□ -2.36
VPS25YJR102C SPC1P46965 94 aa0.29□□□□□ -2.36
VPS25YJR102C YOR289WQ12012 251 aaPredicted RBP0.29□□□□□ -2.36
VPS25YJR102C YNL042W-BQ3E7Z2 85 aa0.29□□□□□ -2.36
VPS25YJR102C BPT1P14772 1559 aa0.28□□□□□ -2.36
VPS25YJR102C NHP10Q03435 203 aa0.28□□□□□ -2.36
VPS25YJR102C KSH1Q8TGJ3 72 aa0.28□□□□□ -2.36
VPS25YJR102C Q0032Q9ZZX7 96 aa0.28□□□□□ -2.36
VPS25YJR102C SDH6Q3E785 79 aa0.27□□□□□ -2.37
VPS25YJR102C FPR2P32472 135 aa0.26□□□□□ -2.37
VPS25YJR102C ATP18P81450 59 aa0.26□□□□□ -2.37
VPS25YJR102C YOL097W-AQ3E7Y9 61 aa0.26□□□□□ -2.37
VPS25YJR102C YCR085WP25650 117 aa0.25□□□□□ -2.37
VPS25YJR102C YBR201C-AQ2V2Q3 67 aa0.25□□□□□ -2.37
VPS25YJR102C YDR381C-AQ3E6R5 114 aa0.25□□□□□ -2.37
VPS25YJR102C YAL065CO13511 128 aa0.24□□□□□ -2.37
VPS25YJR102C ECM12O13529 151 aa0.24□□□□□ -2.37
VPS25YJR102C YGR025WP53216 100 aa0.24□□□□□ -2.37
VPS25YJR102C YBR016WP38216 128 aa0.23□□□□□ -2.37
VPS25YJR102C YBR032WP38223 100 aa0.23□□□□□ -2.37
VPS25YJR102C EDC1P53080 175 aaPredicted RBP0.23□□□□□ -2.37
VPS25YJR102C SCP1Q08873 200 aa0.23□□□□□ -2.37
VPS25YJR102C SWR1Q05471 1514 aa0.23□□□□□ -2.37
VPS25YJR102C RPA190P10964 1664 aaKnown RBP0.22□□□□□ -2.37
VPS25YJR102C YDR042CQ03205 200 aa0.22□□□□□ -2.37
VPS25YJR102C YPR108W-AQ3E7B3 70 aa0.22□□□□□ -2.37
VPS25YJR102C YMR122W-AQ3E842 84 aa0.22□□□□□ -2.37
VPS25YJR102C YOR105WQ08504 108 aa0.21□□□□□ -2.38
VPS25YJR102C TY1B-BRQ12193 1756 aa0.2□□□□□ -2.38
VPS25YJR102C PAU23Q07987 124 aa0.2□□□□□ -2.38
VPS25YJR102C PAU17Q12370 124 aa0.2□□□□□ -2.38
VPS25YJR102C YOR343CQ12484 108 aa0.2□□□□□ -2.38
VPS25YJR102C RRT15Q3E811 62 aa0.2□□□□□ -2.38
VPS25YJR102C GDB1Q06625 1536 aa0.19□□□□□ -2.38
VPS25YJR102C YKL065W-AQ2V2P2 73 aa0.19□□□□□ -2.38
VPS25YJR102C YCR075W-AQ3E830 75 aa0.19□□□□□ -2.38
VPS25YJR102C MOT1P32333 1867 aa0.18□□□□□ -2.38
VPS25YJR102C DNF3Q12674 1656 aa0.18□□□□□ -2.38
VPS25YJR102C YDR246W-AQ3E763 66 aa0.18□□□□□ -2.38
VPS25YJR102C HKR1P41809 1802 aa0.17□□□□□ -2.38
VPS25YJR102C TY1B-LR3P0C2I6 1755 aaKnown RBP0.17□□□□□ -2.38
VPS25YJR102C TY1B-PR2P0C2J0 1756 aa0.17□□□□□ -2.38
VPS25YJR102C TY1B-PR3P0C2J1 1755 aaKnown RBP0.17□□□□□ -2.38
VPS25YJR102C OLI1P61829 76 aa0.16□□□□□ -2.38
VPS25YJR102C YCR108CQ3E819 63 aa0.16□□□□□ -2.38
VPS25YJR102C YMR001C-AQ8TGS9 76 aa0.16□□□□□ -2.38
VPS25YJR102C POL1P13382 1468 aa0.16□□□□□ -2.38
VPS25YJR102C MMS1Q06211 1407 aa0.15□□□□□ -2.39
VPS25YJR102C YMR082CQ04276 118 aa0.15□□□□□ -2.39
VPS25YJR102C BPH1P25356 2167 aa0.15□□□□□ -2.39
VPS25YJR102C PDR10P51533 1564 aa0.15□□□□□ -2.39
VPS25YJR102C TY1B-DR6P0C2I3 1755 aa0.14□□□□□ -2.39
VPS25YJR102C TY1B-LR2P0C2I5 1755 aa0.14□□□□□ -2.39
VPS25YJR102C TY1B-JR2P47100 1755 aaKnown RBP0.14□□□□□ -2.39
VPS25YJR102C TY1B-MR1Q04214 1755 aa0.14□□□□□ -2.39
VPS25YJR102C TY1B-MR2Q04670 1755 aaKnown RBP0.14□□□□□ -2.39
VPS25YJR102C TY1B-NL1Q12112 1755 aa0.14□□□□□ -2.39
VPS25YJR102C TY1B-GR1Q12141 1755 aa0.14□□□□□ -2.39
VPS25YJR102C TY1B-GR3Q12316 1755 aa0.14□□□□□ -2.39
VPS25YJR102C TY1B-PLQ12414 1755 aaKnown RBP0.14□□□□□ -2.39
VPS25YJR102C TY1B-ORQ92393 1755 aa0.14□□□□□ -2.39
VPS25YJR102C SEN1Q00416 2231 aaKnown RBP0.14□□□□□ -2.39
VPS25YJR102C LSM2P38203 95 aaKnown RBP0.14□□□□□ -2.39
VPS25YJR102C YLR146W-AQ2V2P1 62 aa0.14□□□□□ -2.39
VPS25YJR102C YKL018C-AQ3E7A7 99 aa0.14□□□□□ -2.39
VPS25YJR102C YOR008C-AQ3E7B9 74 aa0.14□□□□□ -2.39
VPS25YJR102C NOP10Q6Q547 58 aaPredicted RBP0.14□□□□□ -2.39
VPS25YJR102C LTE1P07866 1435 aa0.13□□□□□ -2.39
VPS25YJR102C YOR314WQ12506 109 aa0.13□□□□□ -2.39
VPS25YJR102C ECM29P38737 1868 aa0.13□□□□□ -2.39
VPS25YJR102C STT4P37297 1900 aa0.13□□□□□ -2.39
VPS25YJR102C APC1P53886 1748 aa0.13□□□□□ -2.39
VPS25YJR102C XRN1P22147 1528 aaKnown RBP0.13□□□□□ -2.39
VPS25YJR102C SKI3P17883 1432 aaKnown RBP0.13□□□□□ -2.39
VPS25YJR102C MMS22Q06164 1454 aa0.12□□□□□ -2.39
VPS25YJR102C YBL044WP38194 122 aa0.12□□□□□ -2.39
VPS25YJR102C RPS29AP41057 56 aaKnown RBP0.12□□□□□ -2.39
VPS25YJR102C SIP18P50263 79 aa0.12□□□□□ -2.39
VPS25YJR102C CWP2P43497 92 aa0.11□□□□□ -2.39
VPS25YJR102C ATP17Q06405 101 aa0.11□□□□□ -2.39
VPS25YJR102C POC4Q12245 148 aaPredicted RBP0.11□□□□□ -2.39
VPS25YJR102C YGL194C-AQ2V2P6 80 aa0.11□□□□□ -2.39
VPS25YJR102C YMR175W-AQ3E766 64 aa0.11□□□□□ -2.39
VPS25YJR102C TY1B-DR5P0C2I2 1755 aa0.11□□□□□ -2.39
VPS25YJR102C TY1B-PR1P0C2I9 1755 aaKnown RBP0.11□□□□□ -2.39
VPS25YJR102C TY1B-JR1P47098 1755 aa0.11□□□□□ -2.39
VPS25YJR102C TY1B-ML2Q03434 1755 aaKnown RBP0.11□□□□□ -2.39
VPS25YJR102C TY1B-ER1Q03612 1755 aa0.11□□□□□ -2.39
VPS25YJR102C TY1B-ER2Q03619 1755 aa0.11□□□□□ -2.39
VPS25YJR102C TY1B-DR1Q03855 1755 aa0.11□□□□□ -2.39
VPS25YJR102C TY1B-ML1Q04711 1755 aaKnown RBP0.11□□□□□ -2.39
VPS25YJR102C TY1B-LR1Q12088 1755 aaKnown RBP0.11□□□□□ -2.39
VPS25YJR102C TY1B-GR2Q12269 1755 aa0.11□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 52.6 ms