RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W YGR164WP53291 111 aa2.38□□□□□ -2.03
CAF130YGR134W CYT2Q00873 224 aa2.38□□□□□ -2.03
CAF130YGR134W HPA2Q06592 156 aa2.38□□□□□ -2.03
CAF130YGR134W YBR013CP38215 129 aa2.37□□□□□ -2.03
CAF130YGR134W SSS1P35179 80 aa2.37□□□□□ -2.03
CAF130YGR134W YHR022CP38763 256 aa2.37□□□□□ -2.03
CAF130YGR134W CIS3P47001 227 aa2.37□□□□□ -2.03
CAF130YGR134W YOR343CQ12484 108 aa2.37□□□□□ -2.03
CAF130YGR134W OST5Q92316 86 aa2.37□□□□□ -2.03
CAF130YGR134W SPC1P46965 94 aa2.36□□□□□ -2.03
CAF130YGR134W PAU4P53427 120 aa2.36□□□□□ -2.03
CAF130YGR134W TAR1Q8TGM6 124 aa2.36□□□□□ -2.03
CAF130YGR134W SRX1P36077 127 aa2.36□□□□□ -2.03
CAF130YGR134W YEL014CP39999 101 aa2.36□□□□□ -2.03
CAF130YGR134W YPR153WQ06537 140 aa2.36□□□□□ -2.03
CAF130YGR134W EMC6Q12431 108 aa2.36□□□□□ -2.03
CAF130YGR134W BEM2P39960 2167 aaKnown RBP2.36□□□□□ -2.03
CAF130YGR134W FPR2P32472 135 aa2.36□□□□□ -2.03
CAF130YGR134W LST8P41318 303 aa2.36□□□□□ -2.03
CAF130YGR134W YLR146W-AQ2V2P1 62 aa2.36□□□□□ -2.03
CAF130YGR134W PRP8P33334 2413 aaKnown RBP2.36□□□□□ -2.03
CAF130YGR134W QCR8P08525 94 aa2.35□□□□□ -2.03
CAF130YGR134W YIR020CP40575 100 aa2.35□□□□□ -2.03
CAF130YGR134W HUR1P45820 110 aa2.35□□□□□ -2.03
CAF130YGR134W YDR042CQ03205 200 aa2.35□□□□□ -2.03
CAF130YGR134W PAU23Q07987 124 aa2.35□□□□□ -2.03
CAF130YGR134W PAU17Q12370 124 aa2.35□□□□□ -2.03
CAF130YGR134W YPR108W-AQ3E7B3 70 aa2.35□□□□□ -2.03
CAF130YGR134W YNR034W-AQ3E841 98 aa2.35□□□□□ -2.03
CAF130YGR134W ENV10Q99382 181 aa2.35□□□□□ -2.03
CAF130YGR134W GCN1P33892 2672 aaKnown RBP2.35□□□□□ -2.03
CAF130YGR134W PAU1P0CE88 120 aa2.35□□□□□ -2.03
CAF130YGR134W PAU14P0CE89 120 aa2.35□□□□□ -2.03
CAF130YGR134W PAU6P0CE90 120 aa2.35□□□□□ -2.03
CAF130YGR134W PAU18P0CE91 120 aa2.35□□□□□ -2.03
CAF130YGR134W PAU8P0CE92 120 aa2.35□□□□□ -2.03
CAF130YGR134W PAU11P0CE93 120 aa2.35□□□□□ -2.03
CAF130YGR134W QCR9P22289 66 aa2.35□□□□□ -2.03
CAF130YGR134W PAU13P38725 120 aa2.35□□□□□ -2.03
CAF130YGR134W PAU10Q03050 120 aa2.35□□□□□ -2.03
CAF130YGR134W PAU20Q08322 120 aa2.35□□□□□ -2.03
CAF130YGR134W PAU9Q3E770 120 aa2.35□□□□□ -2.03
CAF130YGR134W YJL144WP47009 104 aa2.35□□□□□ -2.03
CAF130YGR134W YGL014C-AP0C5N1 53 aa2.34□□□□□ -2.04
CAF130YGR134W COA2Q3E823 68 aa2.34□□□□□ -2.04
CAF130YGR134W NHP2P32495 156 aaPredicted RBP2.33□□□□□ -2.04
CAF130YGR134W RPL36BO14455 100 aaKnown RBP2.33□□□□□ -2.04
CAF130YGR134W RPL36AP05745 100 aaPredicted RBP2.33□□□□□ -2.04
CAF130YGR134W YDL157CQ12082 118 aa2.33□□□□□ -2.04
CAF130YGR134W POC4Q12245 148 aaPredicted RBP2.33□□□□□ -2.04
CAF130YGR134W YHR213WP0CI67 198 aa2.33□□□□□ -2.04
CAF130YGR134W ICY1Q04329 127 aa2.33□□□□□ -2.04
CAF130YGR134W YOR032W-AQ8TGS1 66 aa2.33□□□□□ -2.04
CAF130YGR134W BLM10P43583 2143 aa2.33□□□□□ -2.04
CAF130YGR134W RPA12P32529 125 aaKnown RBP2.32□□□□□ -2.04
CAF130YGR134W YLR363W-AQ3E747 85 aa2.32□□□□□ -2.04
CAF130YGR134W YIL086CP40503 102 aa2.32□□□□□ -2.04
CAF130YGR134W RDS3Q06835 107 aaPredicted RBP2.32□□□□□ -2.04
CAF130YGR134W URA2P07259 2214 aaKnown RBP2.32□□□□□ -2.04
CAF130YGR134W ROX3P25046 220 aa2.32□□□□□ -2.04
CAF130YGR134W RGM1Q00453 211 aa2.31□□□□□ -2.04
CAF130YGR134W PRM3Q08931 133 aa2.31□□□□□ -2.04
CAF130YGR134W YHR138CP38841 114 aaPredicted RBP2.31□□□□□ -2.04
CAF130YGR134W YDL012CQ12489 107 aa2.3□□□□□ -2.04
CAF130YGR134W MIC27P50945 234 aa2.3□□□□□ -2.04
CAF130YGR134W YGL258W-AQ3E740 77 aa2.3□□□□□ -2.04
CAF130YGR134W UTP20P35194 2493 aaKnown RBP2.3□□□□□ -2.04
CAF130YGR134W YSF3P0C074 85 aaPredicted RBP2.3□□□□□ -2.04
CAF130YGR134W YCR085WP25650 117 aa2.3□□□□□ -2.04
CAF130YGR134W YBR219CP38317 127 aa2.3□□□□□ -2.04
CAF130YGR134W DSE2P38844 325 aa2.3□□□□□ -2.04
CAF130YGR134W YIL134C-AQ45U18 67 aa2.3□□□□□ -2.04
CAF130YGR134W ICS3P47034 131 aa2.29□□□□□ -2.04
CAF130YGR134W RPS27AP35997 82 aaKnown RBP2.29□□□□□ -2.04
CAF130YGR134W RPS27BP38711 82 aa2.29□□□□□ -2.04
CAF130YGR134W MIX14Q04341 121 aa2.29□□□□□ -2.04
CAF130YGR134W LSM6Q06406 86 aaKnown RBP2.29□□□□□ -2.04
CAF130YGR134W YKL023C-AQ2V2P3 75 aa2.29□□□□□ -2.04
CAF130YGR134W IMP2P46972 177 aa2.28□□□□□ -2.04
CAF130YGR134W YLR162WQ06235 118 aa2.28□□□□□ -2.04
CAF130YGR134W HUG1Q6Q5K6 68 aa2.28□□□□□ -2.04
CAF130YGR134W RSM18P40033 138 aa2.28□□□□□ -2.04
CAF130YGR134W YOR105WQ08504 108 aa2.28□□□□□ -2.04
CAF130YGR134W YIL163CP40448 117 aa2.27□□□□□ -2.05
CAF130YGR134W YHR173CP38864 112 aa2.27□□□□□ -2.05
CAF130YGR134W YCR095W-AQ3E787 52 aa2.27□□□□□ -2.05
CAF130YGR134W POL2P21951 2222 aaKnown RBP2.27□□□□□ -2.05
CAF130YGR134W YHR214C-DP0CX93 97 aa2.26□□□□□ -2.05
CAF130YGR134W NRG2P38082 220 aa2.26□□□□□ -2.05
CAF130YGR134W YBR027CP38220 110 aa2.26□□□□□ -2.05
CAF130YGR134W VAM10Q08474 114 aa2.26□□□□□ -2.05
CAF130YGR134W YIL046W-AQ3E7Z4 54 aa2.26□□□□□ -2.05
CAF130YGR134W COA3Q3E7B2 85 aa2.26□□□□□ -2.05
CAF130YGR134W TOR2P32600 2474 aaKnown RBP2.25□□□□□ -2.05
CAF130YGR134W YDR114CQ04597 100 aa2.25□□□□□ -2.05
CAF130YGR134W RPL33AP05744 107 aaKnown RBP2.24□□□□□ -2.05
CAF130YGR134W SPI1P40092 148 aa2.24□□□□□ -2.05
CAF130YGR134W YMR007WQ03675 126 aa2.24□□□□□ -2.05
CAF130YGR134W PAI3P01094 68 aa2.24□□□□□ -2.05
CAF130YGR134W YMR122CQ03879 124 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 129.3 ms