RNA–Protein interactions for RNA: YFR034C

PHO4, Transcript of Basic helix-loop-helix (bHLH) transcription factor of the myc-family, yeastyeast

Gene PHO4, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO4YFR034C YMR320WQ04897 101 aa9.22□□□□□ -0.93
PHO4YFR034C MET32Q12041 191 aa9.21□□□□□ -0.94
PHO4YFR034C NHP2P32495 156 aaPredicted RBP9.2□□□□□ -0.94
PHO4YFR034C YGL015CP33199 130 aa9.2□□□□□ -0.94
PHO4YFR034C YRA2P36036 203 aaKnown RBP RIP-Chip data9.2□□□□□ -0.94not detected
PHO4YFR034C CWP2P43497 92 aa9.2□□□□□ -0.94
PHO4YFR034C YMR175W-AQ3E766 64 aa9.2□□□□□ -0.94
PHO4YFR034C CDC43P18898 376 aa9.19□□□□□ -0.94
PHO4YFR034C RPR2P40571 144 aa9.19□□□□□ -0.94
PHO4YFR034C CPR1P14832 162 aaKnown RBP9.18□□□□□ -0.94
PHO4YFR034C YAL065CO13511 128 aa9.17□□□□□ -0.94
PHO4YFR034C YIA6P40556 373 aa9.17□□□□□ -0.94
PHO4YFR034C YHR130CP38834 111 aa9.16□□□□□ -0.94
PHO4YFR034C RPC10P40422 70 aa9.16□□□□□ -0.94
PHO4YFR034C UBC11P52492 156 aa9.15□□□□□ -0.94
PHO4YFR034C YLL066W-BQ8TGJ7 56 aa9.15□□□□□ -0.94
PHO4YFR034C DIF1O13577 133 aa9.14□□□□□ -0.95
PHO4YFR034C YDR115WQ04598 105 aa9.14□□□□□ -0.95
PHO4YFR034C PBA1Q05778 276 aa9.14□□□□□ -0.95
PHO4YFR034C YLL006W-AQ3E814 58 aa9.14□□□□□ -0.95
PHO4YFR034C YDL241WQ07738 123 aa9.13□□□□□ -0.95
PHO4YFR034C SVP26P38869 228 aa9.12□□□□□ -0.95
PHO4YFR034C YAL064WP39711 94 aa9.12□□□□□ -0.95
PHO4YFR034C RTC6O14464 93 aa9.11□□□□□ -0.95
PHO4YFR034C RGM1Q00453 211 aa9.11□□□□□ -0.95
PHO4YFR034C ARO2P28777 376 aaKnown RBP9.1□□□□□ -0.95
PHO4YFR034C YBL081WP38180 368 aaKnown RBP9.1□□□□□ -0.95
PHO4YFR034C EOS1P53938 366 aa9.1□□□□□ -0.95
PHO4YFR034C YOR020W-AQ3E824 90 aa9.1□□□□□ -0.95
PHO4YFR034C DUT1P33317 147 aa9.07□□□□□ -0.96
PHO4YFR034C HPA2Q06592 156 aa9.06□□□□□ -0.96
PHO4YFR034C COX10P21592 462 aa9.05□□□□□ -0.96
PHO4YFR034C ABF2Q02486 183 aa9.05□□□□□ -0.96
PHO4YFR034C RRT15Q3E811 62 aa9.05□□□□□ -0.96
PHO4YFR034C HUR1P45820 110 aa9.03□□□□□ -0.96
PHO4YFR034C AQY2P0CD90 149 aa9.02□□□□□ -0.97
PHO4YFR034C MVB12P42939 101 aa9.02□□□□□ -0.97
PHO4YFR034C MRPL24P36525 258 aaPredicted RBP9.01□□□□□ -0.97
PHO4YFR034C SMD1Q02260 146 aaPredicted RBP9.01□□□□□ -0.97
PHO4YFR034C YPL229WQ99395 206 aa9.01□□□□□ -0.97
PHO4YFR034C RPL29P05747 59 aaPredicted RBP9□□□□□ -0.97
PHO4YFR034C KNH1P50112 268 aa8.99□□□□□ -0.97
PHO4YFR034C YAR023CD6VPM8 179 aa8.98□□□□□ -0.97
PHO4YFR034C RPL11AP0C0W9 174 aaKnown RBP8.98□□□□□ -0.97
PHO4YFR034C YFL019CP43576 117 aa8.98□□□□□ -0.97
PHO4YFR034C YOR034C-AQ3E735 80 aa8.98□□□□□ -0.97
PHO4YFR034C RPL11BQ3E757 174 aaPredicted RBP8.98□□□□□ -0.97
PHO4YFR034C IRC21Q04772 201 aa8.97□□□□□ -0.97
PHO4YFR034C YBL039W-BP0C268 59 aa8.96□□□□□ -0.98
PHO4YFR034C DSE2P38844 325 aa8.96□□□□□ -0.98
PHO4YFR034C RPA12P32529 125 aaKnown RBP8.94□□□□□ -0.98
PHO4YFR034C VTS1Q08831 523 aaKnown RBP RIP-Chip data8.94□□□□□ -0.98not detected
PHO4YFR034C YLR236CA0A023PZG4 107 aa8.93□□□□□ -0.98
PHO4YFR034C OST2P46964 130 aa8.93□□□□□ -0.98
PHO4YFR034C RUB1Q03919 77 aa8.93□□□□□ -0.98
PHO4YFR034C ICY1Q04329 127 aa8.93□□□□□ -0.98
PHO4YFR034C SLO1Q3E784 85 aa8.93□□□□□ -0.98
PHO4YFR034C AIM19P40502 157 aa8.92□□□□□ -0.98
PHO4YFR034C SNA2P56508 79 aa8.92□□□□□ -0.98
PHO4YFR034C ATX1P38636 73 aa8.91□□□□□ -0.98
PHO4YFR034C YPL257WQ08974 193 aa8.9□□□□□ -0.98
PHO4YFR034C STF1P01098 86 aa8.89□□□□□ -0.99
PHO4YFR034C YNL162W-AQ3E7A8 72 aa8.88□□□□□ -0.99
PHO4YFR034C UBC4P15731 148 aa8.87□□□□□ -0.99
PHO4YFR034C IGD1P43598 195 aa8.87□□□□□ -0.99
PHO4YFR034C RPL26AP05743 127 aaKnown RBP8.86□□□□□ -0.99
PHO4YFR034C RPL26BP53221 127 aaKnown RBP8.86□□□□□ -0.99
PHO4YFR034C MSA2P36157 363 aa8.85□□□□□ -0.99
PHO4YFR034C MPC3P53311 146 aa8.84□□□□□ -0.99
PHO4YFR034C YDR029WQ12111 104 aa8.84□□□□□ -0.99
PHO4YFR034C Q0032Q9ZZX7 96 aa8.84□□□□□ -0.99
PHO4YFR034C SMP1P38128 452 aa8.83□□□□□ -1
PHO4YFR034C YGL041C-BQ3E750 60 aa8.82□□□□□ -1
PHO4YFR034C INO4P13902 151 aa8.81□□□□□ -1
PHO4YFR034C YPR195CQ06594 109 aa8.81□□□□□ -1
PHO4YFR034C YCR085WP25650 117 aa8.8□□□□□ -1
PHO4YFR034C YLR307C-AQ3E825 87 aa8.8□□□□□ -1
PHO4YFR034C YJR107C-AP0CT86 78 aa8.79□□□□□ -1
PHO4YFR034C ECM12O13529 151 aa8.77□□□□□ -1.01
PHO4YFR034C YBR230W-AQ3E762 66 aa8.77□□□□□ -1.01
PHO4YFR034C PBI2P0CT04 75 aaKnown RBP8.76□□□□□ -1.01
PHO4YFR034C PEX22P39718 180 aa8.76□□□□□ -1.01
PHO4YFR034C MRP10O75012 95 aa8.75□□□□□ -1.01
PHO4YFR034C YDR034C-AP0C289 58 aa8.75□□□□□ -1.01
PHO4YFR034C FYV5P25585 152 aa8.75□□□□□ -1.01
PHO4YFR034C YJL127C-BQ3E828 52 aa8.75□□□□□ -1.01
PHO4YFR034C YDR381C-AQ3E6R5 114 aa8.74□□□□□ -1.01
PHO4YFR034C YNL042W-BQ3E7Z2 85 aa8.73□□□□□ -1.01
PHO4YFR034C SKI6P46948 246 aaPredicted RBP8.72□□□□□ -1.01
PHO4YFR034C ATP18P81450 59 aa8.71□□□□□ -1.02
PHO4YFR034C ISD11Q6Q560 94 aa8.69□□□□□ -1.02
PHO4YFR034C YGL193CP53097 103 aa8.68□□□□□ -1.02
PHO4YFR034C TSC3Q3E790 80 aa8.68□□□□□ -1.02
PHO4YFR034C YAL063C-AQ3E791 96 aa8.67□□□□□ -1.02
PHO4YFR034C SFT1P43682 97 aa8.66□□□□□ -1.02
PHO4YFR034C YIL002W-AQ3E7Z5 69 aa8.65□□□□□ -1.02
PHO4YFR034C YFL065CP43539 102 aa8.64□□□□□ -1.03
PHO4YFR034C YPR203WQ08994 102 aa8.64□□□□□ -1.03
PHO4YFR034C YFR009W-AP0C5M9 85 aa8.63□□□□□ -1.03
PHO4YFR034C YLR156WP0CE96 114 aa8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms