RNA–Protein interactions for RNA: YDL070W

BDF2, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF2, Length 1,917 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF2YDL070W KRE9P39005 276 aa5.04□□□□□ -1.6
BDF2YDL070W YCL042WP25572 119 aa5.03□□□□□ -1.6
BDF2YDL070W YCR050CP25630 102 aa5.03□□□□□ -1.6
BDF2YDL070W RPL16BP26785 198 aaKnown RBP5.03□□□□□ -1.6
BDF2YDL070W RRT13P40042 185 aa5.03□□□□□ -1.6
BDF2YDL070W YEL008WP40001 126 aa5.03□□□□□ -1.6
BDF2YDL070W RGM1Q00453 211 aa5.03□□□□□ -1.6
BDF2YDL070W PPT2Q12036 173 aa5.03□□□□□ -1.6
BDF2YDL070W YOR034C-AQ3E735 80 aa5.03□□□□□ -1.6
BDF2YDL070W YNL194CP40169 301 aa5.02□□□□□ -1.61
BDF2YDL070W SBH1P52870 82 aa5.02□□□□□ -1.61
BDF2YDL070W CCW12Q12127 133 aa5.02□□□□□ -1.61
BDF2YDL070W YOR011W-AQ3E807 68 aa5.01□□□□□ -1.61
BDF2YDL070W ARC15P40518 154 aaRIP-Chip data5.01□□□□□ -1.61not detected
BDF2YDL070W YBR121C-AP0C5L4 52 aa5□□□□□ -1.61
BDF2YDL070W UBC11P52492 156 aa5□□□□□ -1.61
BDF2YDL070W YML122CQ03207 126 aa5□□□□□ -1.61
BDF2YDL070W YER187WP40102 141 aa4.99□□□□□ -1.61
BDF2YDL070W YLR285C-AQ3E771 56 aa4.99□□□□□ -1.61
BDF2YDL070W YER135CP40082 130 aa4.99□□□□□ -1.61
BDF2YDL070W YPR013CQ12145 317 aa4.99□□□□□ -1.61
BDF2YDL070W RPS28BP0C0X0 67 aaKnown RBP4.98□□□□□ -1.61
BDF2YDL070W RPS28AQ3E7X9 67 aaPredicted RBP4.98□□□□□ -1.61
BDF2YDL070W IRC21Q04772 201 aa4.97□□□□□ -1.61
BDF2YDL070W YNL146C-AQ3E7Z1 64 aa4.97□□□□□ -1.61
BDF2YDL070W YJR107C-AP0CT86 78 aa4.96□□□□□ -1.62
BDF2YDL070W YRA2P36036 203 aaKnown RBP RIP-Chip data4.96□□□□□ -1.62not detected
BDF2YDL070W YLR281CQ05863 155 aa4.95□□□□□ -1.62
BDF2YDL070W RPL11AP0C0W9 174 aaKnown RBP4.95□□□□□ -1.62
BDF2YDL070W ERG28P40030 148 aa4.95□□□□□ -1.62
BDF2YDL070W SUT1P53032 299 aaKnown RBP4.95□□□□□ -1.62
BDF2YDL070W YMR295CQ03559 197 aa4.95□□□□□ -1.62
BDF2YDL070W YLR236CA0A023PZG4 107 aa4.94□□□□□ -1.62
BDF2YDL070W YLR156WP0CE96 114 aa4.94□□□□□ -1.62
BDF2YDL070W YLR159WP0CE97 114 aa4.94□□□□□ -1.62
BDF2YDL070W YLR161WP0CE98 114 aa4.94□□□□□ -1.62
BDF2YDL070W COX17Q12287 69 aa4.94□□□□□ -1.62
BDF2YDL070W RPL11BQ3E757 174 aaPredicted RBP4.94□□□□□ -1.62
BDF2YDL070W YMR175W-AQ3E766 64 aa4.94□□□□□ -1.62
BDF2YDL070W YOR020W-AQ3E824 90 aa4.94□□□□□ -1.62
BDF2YDL070W KTI11Q3E840 82 aa4.94□□□□□ -1.62
BDF2YDL070W MIG3P39943 394 aa4.93□□□□□ -1.62
BDF2YDL070W RPR2P40571 144 aa4.93□□□□□ -1.62
BDF2YDL070W EDC1P53080 175 aaPredicted RBP4.93□□□□□ -1.62
BDF2YDL070W ALG13P53178 202 aa4.93□□□□□ -1.62
BDF2YDL070W BET1P22804 142 aa4.93□□□□□ -1.62
BDF2YDL070W COX14P39103 70 aa4.93□□□□□ -1.62
BDF2YDL070W YFR035CP43608 114 aa4.93□□□□□ -1.62
BDF2YDL070W YDR246W-AQ3E763 66 aa4.93□□□□□ -1.62
BDF2YDL070W PMP3P87284 55 aa4.91□□□□□ -1.62
BDF2YDL070W TOS8P53147 276 aa4.91□□□□□ -1.62
BDF2YDL070W HAL1Q01766 294 aa4.91□□□□□ -1.62
BDF2YDL070W YLL006W-AQ3E814 58 aa4.91□□□□□ -1.62
BDF2YDL070W YBR219CP38317 127 aa4.9□□□□□ -1.62
BDF2YDL070W MPC3P53311 146 aa4.9□□□□□ -1.62
BDF2YDL070W YMR244WQ04018 355 aa4.9□□□□□ -1.62
BDF2YDL070W KSH1Q8TGJ3 72 aa4.9□□□□□ -1.62
BDF2YDL070W RTG1P32607 177 aa4.89□□□□□ -1.63
BDF2YDL070W AIM4P38305 123 aaPredicted RBP4.89□□□□□ -1.63
BDF2YDL070W ATP20Q12233 115 aa4.89□□□□□ -1.63
BDF2YDL070W MRPS8Q03799 155 aa4.89□□□□□ -1.63
BDF2YDL070W VAM10Q08474 114 aa4.89□□□□□ -1.63
BDF2YDL070W BPH1P25356 2167 aa4.88□□□□□ -1.63
BDF2YDL070W ATP18P81450 59 aa4.88□□□□□ -1.63
BDF2YDL070W UBC4P15731 148 aa4.87□□□□□ -1.63
BDF2YDL070W GAT4P40569 121 aa4.87□□□□□ -1.63
BDF2YDL070W RPL38P49167 78 aaKnown RBP4.87□□□□□ -1.63
BDF2YDL070W YAR029WP39549 74 aa4.87□□□□□ -1.63
BDF2YDL070W SRL1Q08673 210 aa4.87□□□□□ -1.63
BDF2YDL070W YLR412C-AQ3E742 68 aa4.87□□□□□ -1.63
BDF2YDL070W SPS100P13130 326 aa4.86□□□□□ -1.63
BDF2YDL070W ERI1P62651 68 aaKnown RBP4.85□□□□□ -1.63
BDF2YDL070W YFL019CP43576 117 aa4.85□□□□□ -1.63
BDF2YDL070W YKL183C-AQ3E765 70 aa4.85□□□□□ -1.63
BDF2YDL070W RPS11AP0CX47 156 aaKnown RBP4.84□□□□□ -1.63
BDF2YDL070W RPS11BP0CX48 156 aaKnown RBP4.84□□□□□ -1.63
BDF2YDL070W RSM18P40033 138 aa4.84□□□□□ -1.63
BDF2YDL070W YGR164WP53291 111 aa4.84□□□□□ -1.63
BDF2YDL070W HOR7Q05827 59 aa4.84□□□□□ -1.63
BDF2YDL070W YFR009W-AP0C5M9 85 aa4.84□□□□□ -1.64
BDF2YDL070W YIR020CP40575 100 aa4.84□□□□□ -1.64
BDF2YDL070W RSM19P53733 91 aaPredicted RBP4.84□□□□□ -1.64
BDF2YDL070W ICY1Q04329 127 aa4.84□□□□□ -1.64
BDF2YDL070W SPG4Q04438 115 aa4.84□□□□□ -1.64
BDF2YDL070W YMR320WQ04897 101 aa4.84□□□□□ -1.64
BDF2YDL070W TDA8Q6B2U8 126 aa4.84□□□□□ -1.64
BDF2YDL070W TMC1Q08422 150 aaPredicted RBP4.83□□□□□ -1.64
BDF2YDL070W NOP10Q6Q547 58 aaPredicted RBP4.83□□□□□ -1.64
BDF2YDL070W TDA2P40045 126 aa4.82□□□□□ -1.64
BDF2YDL070W TAR1Q8TGM6 124 aa4.82□□□□□ -1.64
BDF2YDL070W TSC3Q3E790 80 aa4.81□□□□□ -1.64
BDF2YDL070W YAL065CO13511 128 aa4.8□□□□□ -1.64
BDF2YDL070W YPS5P53057 165 aa4.8□□□□□ -1.64
BDF2YDL070W YOR314WQ12506 109 aa4.8□□□□□ -1.64
BDF2YDL070W TIM10P87108 93 aa4.8□□□□□ -1.64
BDF2YDL070W SFT1P43682 97 aa4.78□□□□□ -1.64
BDF2YDL070W CRC1Q12289 327 aa4.78□□□□□ -1.64
BDF2YDL070W YMR122W-AQ3E842 84 aa4.78□□□□□ -1.64
BDF2YDL070W YOR268CQ08734 132 aa4.78□□□□□ -1.64
BDF2YDL070W RRT15Q3E811 62 aa4.78□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms