RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W CYT2Q00873 224 aa4.56□□□□□ -1.68
LSC1YOR142W YPR010C-AA5Z2X5 72 aa4.55□□□□□ -1.68
LSC1YOR142W ADH2P00331 348 aaKnown RBP4.55□□□□□ -1.68
LSC1YOR142W AIM29P36154 155 aa4.55□□□□□ -1.68
LSC1YOR142W YER085CP40058 173 aa4.55□□□□□ -1.68
LSC1YOR142W PCL2P25693 308 aa4.54□□□□□ -1.68
LSC1YOR142W YBR219CP38317 127 aa4.54□□□□□ -1.68
LSC1YOR142W YEL008WP40001 126 aa4.54□□□□□ -1.68
LSC1YOR142W ERG28P40030 148 aa4.54□□□□□ -1.68
LSC1YOR142W TOS6P48560 102 aa4.54□□□□□ -1.68
LSC1YOR142W ERG27Q12452 347 aaKnown RBP4.54□□□□□ -1.68
LSC1YOR142W YPL229WQ99395 206 aa4.54□□□□□ -1.68
LSC1YOR142W YAR023CD6VPM8 179 aa4.53□□□□□ -1.68
LSC1YOR142W TRP1P00912 224 aa4.53□□□□□ -1.68
LSC1YOR142W GSP1P32835 219 aaKnown RBP4.53□□□□□ -1.68
LSC1YOR142W GSP2P32836 220 aaKnown RBP4.53□□□□□ -1.68
LSC1YOR142W YBL081WP38180 368 aaKnown RBP4.53□□□□□ -1.68
LSC1YOR142W SEC72P39742 193 aaKnown RBP4.53□□□□□ -1.68
LSC1YOR142W YGL118CP53132 145 aa4.52□□□□□ -1.69
LSC1YOR142W BET5Q03630 159 aa4.52□□□□□ -1.69
LSC1YOR142W YOR008C-AQ3E7B9 74 aa4.52□□□□□ -1.69
LSC1YOR142W YDR034C-AP0C289 58 aa4.51□□□□□ -1.69
LSC1YOR142W HMRA2P0CY13 119 aa4.51□□□□□ -1.69
LSC1YOR142W YAL064WP39711 94 aa4.51□□□□□ -1.69
LSC1YOR142W YER134CP40081 178 aa4.51□□□□□ -1.69
LSC1YOR142W TPT1Q12272 230 aaKnown RBP4.51□□□□□ -1.69
LSC1YOR142W URM1P40554 99 aaPredicted RBP4.5□□□□□ -1.69
LSC1YOR142W ARL3Q02804 198 aa4.5□□□□□ -1.69
LSC1YOR142W COA3Q3E7B2 85 aa4.5□□□□□ -1.69
LSC1YOR142W YCL021W-AQ96VH3 125 aa4.5□□□□□ -1.69
LSC1YOR142W YDR042CQ03205 200 aa4.49□□□□□ -1.69
LSC1YOR142W PKR1Q03880 122 aaKnown RBP4.49□□□□□ -1.69
LSC1YOR142W YLR112WQ12130 139 aa4.49□□□□□ -1.69
LSC1YOR142W RPC10P40422 70 aa4.48□□□□□ -1.69
LSC1YOR142W ERV14P53173 138 aa4.48□□□□□ -1.69
LSC1YOR142W TIM11P81449 96 aaPredicted RBP4.48□□□□□ -1.69
LSC1YOR142W YMR295CQ03559 197 aa4.48□□□□□ -1.69
LSC1YOR142W YLR194CQ05777 254 aa4.48□□□□□ -1.69
LSC1YOR142W ENV10Q99382 181 aa4.48□□□□□ -1.69
LSC1YOR142W OST3P48439 350 aa4.47□□□□□ -1.69
LSC1YOR142W POP3P53833 195 aaPredicted RBP4.47□□□□□ -1.69
LSC1YOR142W SMP1P38128 452 aa4.46□□□□□ -1.7
LSC1YOR142W RPL27BP0C2H7 136 aaKnown RBP4.45□□□□□ -1.7
LSC1YOR142W ATP15P21306 62 aa4.45□□□□□ -1.7
LSC1YOR142W YAR029WP39549 74 aa4.45□□□□□ -1.7
LSC1YOR142W CIN5P40917 295 aa4.45□□□□□ -1.7
LSC1YOR142W SNA2P56508 79 aa4.45□□□□□ -1.7
LSC1YOR142W YDR029WQ12111 104 aa4.45□□□□□ -1.7
LSC1YOR142W RPL31AP0C2H8 113 aaKnown RBP4.44□□□□□ -1.7
LSC1YOR142W APS1P35181 156 aa4.44□□□□□ -1.7
LSC1YOR142W YML108WQ03759 105 aa4.44□□□□□ -1.7
LSC1YOR142W YMR103CQ04436 120 aa4.44□□□□□ -1.7
LSC1YOR142W YMR175W-AQ3E766 64 aa4.44□□□□□ -1.7
LSC1YOR142W HTL1Q9URQ5 78 aa4.44□□□□□ -1.7
LSC1YOR142W YAL065CO13511 128 aa4.43□□□□□ -1.7
LSC1YOR142W FYV4P38783 130 aaPredicted RBP4.43□□□□□ -1.7
LSC1YOR142W CMC2Q3E7A4 109 aa4.43□□□□□ -1.7
LSC1YOR142W YDL022C-AP0C5L6 82 aa4.42□□□□□ -1.7
LSC1YOR142W YKL070WP36087 169 aa4.42□□□□□ -1.7
LSC1YOR142W SEN15Q04675 128 aa4.42□□□□□ -1.7
LSC1YOR142W DFM1Q12743 341 aaKnown RBP4.41□□□□□ -1.7
LSC1YOR142W YLR307C-AQ3E825 87 aa4.41□□□□□ -1.7
LSC1YOR142W SSS1P35179 80 aa4.4□□□□□ -1.71
LSC1YOR142W VTC1P40046 129 aaRIP-Chip data4.4□□□□□ -1.71not detected
LSC1YOR142W AIM11P87275 137 aa4.4□□□□□ -1.71
LSC1YOR142W CUE4Q04201 117 aaPredicted RBP4.4□□□□□ -1.71
LSC1YOR142W SHU1P38751 150 aa4.39□□□□□ -1.71
LSC1YOR142W PEX22P39718 180 aa4.39□□□□□ -1.71
LSC1YOR142W COX14P39103 70 aa4.38□□□□□ -1.71
LSC1YOR142W YIL134C-AQ45U18 67 aa4.38□□□□□ -1.71
LSC1YOR142W PAU16P35994 123 aa4.37□□□□□ -1.71
LSC1YOR142W YDL241WQ07738 123 aa4.37□□□□□ -1.71
LSC1YOR142W SCS22Q6Q595 175 aa4.37□□□□□ -1.71
LSC1YOR142W TOA2P32774 122 aa4.36□□□□□ -1.71
LSC1YOR142W LCL1Q02786 101 aa4.36□□□□□ -1.71
LSC1YOR142W YPL261CQ08976 102 aa4.36□□□□□ -1.71
LSC1YOR142W RPL18AP0CX49 186 aaKnown RBP4.35□□□□□ -1.71
LSC1YOR142W RPL18BP0CX50 186 aaKnown RBP4.35□□□□□ -1.71
LSC1YOR142W MRPL11P36521 249 aaPredicted RBP4.35□□□□□ -1.71
LSC1YOR142W YEL067CP39978 195 aa4.35□□□□□ -1.71
LSC1YOR142W MRPS12P53732 153 aa4.35□□□□□ -1.71
LSC1YOR142W AQY2P0CD90 149 aa4.34□□□□□ -1.71
LSC1YOR142W YKR041WP36134 250 aa4.34□□□□□ -1.71
LSC1YOR142W RPL32P38061 130 aaKnown RBP4.34□□□□□ -1.71
LSC1YOR142W YLR050CQ12155 161 aaKnown RBP4.34□□□□□ -1.71
LSC1YOR142W ECM12O13529 151 aa4.33□□□□□ -1.72
LSC1YOR142W SEC11P15367 167 aa4.33□□□□□ -1.72
LSC1YOR142W PEX17P40155 199 aa4.33□□□□□ -1.72
LSC1YOR142W CWP2P43497 92 aa4.33□□□□□ -1.72
LSC1YOR142W YFL067WP43537 175 aa4.33□□□□□ -1.72
LSC1YOR142W MMS2P53152 137 aa4.33□□□□□ -1.72
LSC1YOR142W SMD1Q02260 146 aaPredicted RBP4.33□□□□□ -1.72
LSC1YOR142W CNL1Q06333 122 aa4.33□□□□□ -1.72
LSC1YOR142W PPT2Q12036 173 aa4.33□□□□□ -1.72
LSC1YOR142W YBR182C-AQ8TGU6 64 aa4.33□□□□□ -1.72
LSC1YOR142W ADH1P00330 348 aaKnown RBP4.32□□□□□ -1.72
LSC1YOR142W RPL28P02406 149 aaKnown RBP4.32□□□□□ -1.72
LSC1YOR142W OXA1P39952 402 aa4.32□□□□□ -1.72
LSC1YOR142W HAC1P41546 238 aa4.32□□□□□ -1.72
LSC1YOR142W IGD1P43598 195 aa4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms