RNA–Protein interactions for RNA: YLR114C

AVL9, Transcript of Conserved protein involved in exocytic transport from the Golgi, yeastyeast

Gene AVL9, Length 2,295 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVL9YLR114C YKL069WP36088 180 aa5.77□□□□□ -1.49
AVL9YLR114C AIM34Q03673 198 aa5.77□□□□□ -1.49
AVL9YLR114C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.77□□□□□ -1.49not detected
AVL9YLR114C RPS8AP0CX39 200 aaKnown RBP5.76□□□□□ -1.49
AVL9YLR114C RPS8BP0CX40 200 aaKnown RBP5.76□□□□□ -1.49
AVL9YLR114C PRM3Q08931 133 aa5.76□□□□□ -1.49
AVL9YLR114C YOR097CQ12274 175 aaPredicted RBP5.76□□□□□ -1.49
AVL9YLR114C YJR146WP47174 117 aa5.76□□□□□ -1.49
AVL9YLR114C SRL1Q08673 210 aa5.76□□□□□ -1.49
AVL9YLR114C CDC43P18898 376 aa5.75□□□□□ -1.49
AVL9YLR114C RPL16AP26784 199 aaKnown RBP5.75□□□□□ -1.49
AVL9YLR114C YPT53P36019 220 aa5.75□□□□□ -1.49
AVL9YLR114C VTC1P40046 129 aaRIP-Chip data5.75□□□□□ -1.49not detected
AVL9YLR114C MIG3P39943 394 aa5.74□□□□□ -1.49
AVL9YLR114C MRPL23Q12487 163 aaPredicted RBP5.74□□□□□ -1.49
AVL9YLR114C Q0255P03881 472 aa5.74□□□□□ -1.49
AVL9YLR114C ATP15P21306 62 aa5.74□□□□□ -1.49
AVL9YLR114C YMR244WQ04018 355 aa5.74□□□□□ -1.49
AVL9YLR114C RRG8Q06109 277 aa5.74□□□□□ -1.49
AVL9YLR114C CCW14O13547 238 aa5.73□□□□□ -1.49
AVL9YLR114C YLR194CQ05777 254 aa5.73□□□□□ -1.49
AVL9YLR114C YLR042CQ07990 161 aa5.73□□□□□ -1.49
AVL9YLR114C CYC7P00045 113 aa5.73□□□□□ -1.49
AVL9YLR114C SIM1P40472 476 aa5.73□□□□□ -1.49
AVL9YLR114C MRPS8Q03799 155 aa5.73□□□□□ -1.49
AVL9YLR114C YER085CP40058 173 aa5.72□□□□□ -1.49
AVL9YLR114C YAR1P46683 200 aa5.72□□□□□ -1.49
AVL9YLR114C NHP2P32495 156 aaPredicted RBP5.72□□□□□ -1.49
AVL9YLR114C LSM6Q06406 86 aaKnown RBP5.72□□□□□ -1.49
AVL9YLR114C RRT13P40042 185 aa5.71□□□□□ -1.5
AVL9YLR114C TRP1P00912 224 aa5.71□□□□□ -1.5
AVL9YLR114C DUT1P33317 147 aa5.71□□□□□ -1.5
AVL9YLR114C VHS2P40463 436 aa5.71□□□□□ -1.5
AVL9YLR114C YFR035CP43608 114 aa5.71□□□□□ -1.5
AVL9YLR114C TAR1Q8TGM6 124 aa5.71□□□□□ -1.5
AVL9YLR114C MEC1P38111 2368 aa5.7□□□□□ -1.5
AVL9YLR114C YER145C-AA0A023PYF4 145 aa5.69□□□□□ -1.5
AVL9YLR114C YCR041WP37265 110 aa5.69□□□□□ -1.5
AVL9YLR114C YCH1P42937 148 aa5.69□□□□□ -1.5
AVL9YLR114C MRPS12P53732 153 aa5.69□□□□□ -1.5
AVL9YLR114C RPP2AP05319 106 aaKnown RBP5.68□□□□□ -1.5
AVL9YLR114C RPL18AP0CX49 186 aaKnown RBP5.68□□□□□ -1.5
AVL9YLR114C RPL18BP0CX50 186 aaKnown RBP5.68□□□□□ -1.5
AVL9YLR114C PEX17P40155 199 aa5.68□□□□□ -1.5
AVL9YLR114C FIP1P45976 327 aa5.68□□□□□ -1.5
AVL9YLR114C RPB9P27999 122 aa5.67□□□□□ -1.5
AVL9YLR114C RPL28P02406 149 aaKnown RBP5.67□□□□□ -1.5
AVL9YLR114C UGX2P32772 223 aa5.66□□□□□ -1.5
AVL9YLR114C OST2P46964 130 aa5.66□□□□□ -1.5
AVL9YLR114C MET32Q12041 191 aa5.66□□□□□ -1.5
AVL9YLR114C MID2P36027 376 aa5.65□□□□□ -1.5
AVL9YLR114C YEL008WP40001 126 aa5.65□□□□□ -1.5
AVL9YLR114C ALG13P53178 202 aa5.65□□□□□ -1.5
AVL9YLR114C YNL190WP53872 204 aa5.65□□□□□ -1.5
AVL9YLR114C HPA2Q06592 156 aa5.65□□□□□ -1.5
AVL9YLR114C YCR075W-AQ3E830 75 aa5.65□□□□□ -1.5
AVL9YLR114C YBR209WP38311 105 aa5.65□□□□□ -1.51
AVL9YLR114C SHU1P38751 150 aa5.65□□□□□ -1.51
AVL9YLR114C YGL088WP53151 121 aa5.65□□□□□ -1.51
AVL9YLR114C ATX1P38636 73 aa5.64□□□□□ -1.51
AVL9YLR114C RPL15AP05748 204 aaKnown RBP5.64□□□□□ -1.51
AVL9YLR114C RPL2AP0CX45 254 aaKnown RBP5.64□□□□□ -1.51
AVL9YLR114C RPL2BP0CX46 254 aaKnown RBP5.64□□□□□ -1.51
AVL9YLR114C YPL080CQ02826 108 aa5.64□□□□□ -1.51
AVL9YLR114C QCR8P08525 94 aa5.63□□□□□ -1.51
AVL9YLR114C RPL43AP0CX25 92 aaKnown RBP5.63□□□□□ -1.51
AVL9YLR114C RPL43BP0CX26 92 aa5.63□□□□□ -1.51
AVL9YLR114C RPS11AP0CX47 156 aaKnown RBP5.63□□□□□ -1.51
AVL9YLR114C RPS11BP0CX48 156 aaKnown RBP5.63□□□□□ -1.51
AVL9YLR114C UBC5P15732 148 aa5.63□□□□□ -1.51
AVL9YLR114C YCL021W-AQ96VH3 125 aa5.63□□□□□ -1.51
AVL9YLR114C YPL229WQ99395 206 aa5.63□□□□□ -1.51
AVL9YLR114C YHR212W-AP0CX91 67 aa5.62□□□□□ -1.51
AVL9YLR114C INO4P13902 151 aa5.62□□□□□ -1.51
AVL9YLR114C PMP3P87284 55 aa5.62□□□□□ -1.51
AVL9YLR114C ISD11Q6Q560 94 aa5.62□□□□□ -1.51
AVL9YLR114C YOR304C-AO14468 76 aa5.61□□□□□ -1.51
AVL9YLR114C YIL059CP40520 121 aa5.61□□□□□ -1.51
AVL9YLR114C MPC2P38857 129 aa5.6□□□□□ -1.51
AVL9YLR114C EOS1P53938 366 aa5.6□□□□□ -1.51
AVL9YLR114C RPA12P32529 125 aaKnown RBP5.59□□□□□ -1.51
AVL9YLR114C TOA2P32774 122 aa5.59□□□□□ -1.51
AVL9YLR114C NRG2P38082 220 aa5.59□□□□□ -1.51
AVL9YLR114C YPS5P53057 165 aa5.59□□□□□ -1.51
AVL9YLR114C COX10P21592 462 aa5.59□□□□□ -1.51
AVL9YLR114C KRE9P39005 276 aa5.59□□□□□ -1.51
AVL9YLR114C YIA6P40556 373 aa5.59□□□□□ -1.51
AVL9YLR114C YHR130CP38834 111 aa5.58□□□□□ -1.52
AVL9YLR114C YFL065CP43539 102 aa5.58□□□□□ -1.52
AVL9YLR114C YPR203WQ08994 102 aa5.58□□□□□ -1.52
AVL9YLR114C YBL112CQ3E7Y4 105 aa5.58□□□□□ -1.52
AVL9YLR114C YMR295CQ03559 197 aa5.57□□□□□ -1.52
AVL9YLR114C YAR029WP39549 74 aa5.57□□□□□ -1.52
AVL9YLR114C ARC15P40518 154 aaRIP-Chip data5.57□□□□□ -1.52not detected
AVL9YLR114C DSE2P38844 325 aa5.56□□□□□ -1.52
AVL9YLR114C YBR219CP38317 127 aa5.55□□□□□ -1.52
AVL9YLR114C COX14P39103 70 aa5.55□□□□□ -1.52
AVL9YLR114C RGM1Q00453 211 aa5.55□□□□□ -1.52
AVL9YLR114C PPT2Q12036 173 aa5.55□□□□□ -1.52
AVL9YLR114C YBR126W-AQ8TGU7 68 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms