RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W LSM2P38203 95 aaKnown RBP2.51□□□□□ -2.01
CAF130YGR134W PIR1Q03178 341 aa2.5□□□□□ -2.01
CAF130YGR134W RTC6O14464 93 aa2.5□□□□□ -2.01
CAF130YGR134W PAU19P0CE85 124 aa2.5□□□□□ -2.01
CAF130YGR134W SEC11P15367 167 aa2.5□□□□□ -2.01
CAF130YGR134W PAU3P25610 124 aa2.5□□□□□ -2.01
CAF130YGR134W EMC5P40540 141 aa2.5□□□□□ -2.01
CAF130YGR134W YFL051CP43552 160 aa2.5□□□□□ -2.01
CAF130YGR134W TMC1Q08422 150 aaPredicted RBP2.5□□□□□ -2.01
CAF130YGR134W VMA9Q3E7B6 73 aa2.5□□□□□ -2.01
CAF130YGR134W FPR1P20081 114 aaKnown RBP2.49□□□□□ -2.01
CAF130YGR134W SRB6P32570 121 aa2.49□□□□□ -2.01
CAF130YGR134W YEL067CP39978 195 aa2.49□□□□□ -2.01
CAF130YGR134W YPR013CQ12145 317 aa2.49□□□□□ -2.01
CAF130YGR134W RPL13BP40212 199 aaKnown RBP2.49□□□□□ -2.01
CAF130YGR134W CWP2P43497 92 aa2.49□□□□□ -2.01
CAF130YGR134W FIT3Q08907 204 aa2.49□□□□□ -2.01
CAF130YGR134W HAP3P13434 144 aa2.49□□□□□ -2.01
CAF130YGR134W FUN14P18411 198 aa2.49□□□□□ -2.01
CAF130YGR134W MSL1P40567 111 aaPredicted RBP2.48□□□□□ -2.01
CAF130YGR134W PAU21P0CE86 164 aa2.48□□□□□ -2.01
CAF130YGR134W PAU22P0CE87 164 aa2.48□□□□□ -2.01
CAF130YGR134W MRP17P28778 131 aa2.48□□□□□ -2.01
CAF130YGR134W YKR032WP36127 104 aa2.48□□□□□ -2.01
CAF130YGR134W RPL33BP41056 107 aaKnown RBP2.48□□□□□ -2.01
CAF130YGR134W NMA1Q06178 401 aaKnown RBP2.48□□□□□ -2.01
CAF130YGR134W ATG8P38182 117 aaRIP-Chip data2.47□□□□□ -2.01not detected
CAF130YGR134W SVP26P38869 228 aa2.47□□□□□ -2.01
CAF130YGR134W HSP10P38910 106 aa2.47□□□□□ -2.01
CAF130YGR134W GCV3P39726 170 aaPredicted RBP2.47□□□□□ -2.01
CAF130YGR134W YGR269WP40326 108 aa2.47□□□□□ -2.01
CAF130YGR134W YMR090WQ04304 227 aaKnown RBP2.47□□□□□ -2.01
CAF130YGR134W YOS1Q3E834 85 aa2.47□□□□□ -2.01
CAF130YGR134W PAU15P40585 124 aa2.47□□□□□ -2.01
CAF130YGR134W YPL067CQ02754 198 aa2.47□□□□□ -2.01
CAF130YGR134W UPS3Q04006 179 aa2.47□□□□□ -2.01
CAF130YGR134W YLR194CQ05777 254 aa2.47□□□□□ -2.01
CAF130YGR134W HMRA2P0CY13 119 aa2.47□□□□□ -2.01
CAF130YGR134W YKR045CP36138 183 aa2.47□□□□□ -2.01
CAF130YGR134W MET31Q03081 177 aa2.47□□□□□ -2.01
CAF130YGR134W PCC1Q3E833 88 aa2.47□□□□□ -2.01
CAF130YGR134W FLO9P39712 1322 aa2.46□□□□□ -2.01
CAF130YGR134W YEL045CP32616 141 aa2.46□□□□□ -2.02
CAF130YGR134W COX8P04039 78 aa2.46□□□□□ -2.02
CAF130YGR134W DCV1P43595 202 aa2.46□□□□□ -2.02
CAF130YGR134W SPG1P50088 95 aa2.46□□□□□ -2.02
CAF130YGR134W YML122CQ03207 126 aa2.46□□□□□ -2.02
CAF130YGR134W YPR195CQ06594 109 aa2.46□□□□□ -2.02
CAF130YGR134W RAF1Q06891 181 aa2.46□□□□□ -2.02
CAF130YGR134W COA6Q3E846 104 aa2.46□□□□□ -2.02
CAF130YGR134W HFA1P32874 2273 aa2.46□□□□□ -2.02
CAF130YGR134W FIT1Q04433 528 aa2.46□□□□□ -2.02
CAF130YGR134W FIT2Q08906 153 aa2.46□□□□□ -2.02
CAF130YGR134W COX19Q3E731 98 aa2.46□□□□□ -2.02
CAF130YGR134W FMT1P32785 401 aa2.45□□□□□ -2.02
CAF130YGR134W YLR296WQ05898 108 aa2.45□□□□□ -2.02
CAF130YGR134W YDR524C-BQ3E6R4 66 aa2.45□□□□□ -2.02
CAF130YGR134W KRE1P17260 313 aa2.45□□□□□ -2.02
CAF130YGR134W MRPS9P38120 278 aa2.45□□□□□ -2.02
CAF130YGR134W PAU5P43575 122 aa2.45□□□□□ -2.02
CAF130YGR134W YPL261CQ08976 102 aa2.45□□□□□ -2.02
CAF130YGR134W UBC4P15731 148 aa2.44□□□□□ -2.02
CAF130YGR134W SOD1P00445 154 aaKnown RBP2.44□□□□□ -2.02
CAF130YGR134W RPS22AP0C0W1 130 aaKnown RBP2.44□□□□□ -2.02
CAF130YGR134W YML079WQ03629 201 aa2.44□□□□□ -2.02
CAF130YGR134W AVO2Q04749 426 aa2.44□□□□□ -2.02
CAF130YGR134W COX23P38824 151 aa2.43□□□□□ -2.02
CAF130YGR134W PAU16P35994 123 aa2.43□□□□□ -2.02
CAF130YGR134W YBR292CP38357 123 aa2.43□□□□□ -2.02
CAF130YGR134W SNN1P48232 102 aa2.43□□□□□ -2.02
CAF130YGR134W DAD1Q12248 94 aa2.43□□□□□ -2.02
CAF130YGR134W YFR010W-AP0C5N0 62 aa2.42□□□□□ -2.02
CAF130YGR134W TIM12P32830 109 aa2.42□□□□□ -2.02
CAF130YGR134W YBR209WP38311 105 aa2.42□□□□□ -2.02
CAF130YGR134W YER187WP40102 141 aa2.42□□□□□ -2.02
CAF130YGR134W DAN1P47178 298 aa2.42□□□□□ -2.02
CAF130YGR134W CUE4Q04201 117 aaPredicted RBP2.42□□□□□ -2.02
CAF130YGR134W MRPL44P19956 98 aa2.42□□□□□ -2.02
CAF130YGR134W ATP19P81451 68 aa2.42□□□□□ -2.02
CAF130YGR134W YPR145C-AQ2V2P0 78 aa2.42□□□□□ -2.02
CAF130YGR134W YLR285C-AQ3E771 56 aa2.41□□□□□ -2.02
CAF130YGR134W RPS22BQ3E7Y3 130 aaKnown RBP2.41□□□□□ -2.02
CAF130YGR134W BRR2P32639 2163 aaKnown RBP2.41□□□□□ -2.02
CAF130YGR134W ECM12O13529 151 aa2.41□□□□□ -2.02
CAF130YGR134W YGL260WP53056 76 aa2.41□□□□□ -2.02
CAF130YGR134W AIM4P38305 123 aaPredicted RBP2.41□□□□□ -2.02
CAF130YGR134W NAT5Q08689 176 aa2.41□□□□□ -2.02
CAF130YGR134W TAO3P40468 2376 aa2.4□□□□□ -2.03
CAF130YGR134W CYB5P40312 120 aa2.4□□□□□ -2.03
CAF130YGR134W VMA21P41806 77 aa2.39□□□□□ -2.03
CAF130YGR134W NCE101Q02820 53 aa2.39□□□□□ -2.03
CAF130YGR134W RPB7P34087 171 aa2.39□□□□□ -2.03
CAF130YGR134W YEL008WP40001 126 aa2.39□□□□□ -2.03
CAF130YGR134W BRP1P53194 125 aa2.39□□□□□ -2.03
CAF130YGR134W YMR082CQ04276 118 aa2.39□□□□□ -2.03
CAF130YGR134W RPS25BP0C0T4 108 aaKnown RBP2.38□□□□□ -2.03
CAF130YGR134W HSP150P32478 413 aa2.38□□□□□ -2.03
CAF130YGR134W YFL065CP43539 102 aa2.38□□□□□ -2.03
CAF130YGR134W YPR203WQ08994 102 aa2.38□□□□□ -2.03
CAF130YGR134W RPS25AQ3E792 108 aaPredicted RBP2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms