RNA–Protein interactions for RNA: YGL240W

DOC1, Transcript of Processivity factor, yeast

Gene DOC1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOC1	YGL240W	TRP1	P00912	224 aa		5	□□□□□ -1.61
DOC1	YGL240W	PCL2	P25693	308 aa		5	□□□□□ -1.61
DOC1	YGL240W	TOS6	P48560	102 aa		5	□□□□□ -1.61
DOC1	YGL240W	BET5	Q03630	159 aa		5	□□□□□ -1.61
DOC1	YGL240W	ERG27	Q12452	347 aa	Known RBP	5	□□□□□ -1.61
DOC1	YGL240W	YOR008C-A	Q3E7B9	74 aa		5	□□□□□ -1.61
DOC1	YGL240W	YAR023C	D6VPM8	179 aa		4.99	□□□□□ -1.61
DOC1	YGL240W	MRP10	O75012	95 aa		4.99	□□□□□ -1.61
DOC1	YGL240W	SEC72	P39742	193 aa	Known RBP	4.99	□□□□□ -1.61
DOC1	YGL240W	YEL008W	P40001	126 aa		4.99	□□□□□ -1.61
DOC1	YGL240W	MED7	Q08278	222 aa		4.99	□□□□□ -1.61
DOC1	YGL240W	YPL229W	Q99395	206 aa		4.99	□□□□□ -1.61
DOC1	YGL240W	GSP1	P32835	219 aa	Known RBP	4.98	□□□□□ -1.61
DOC1	YGL240W	GSP2	P32836	220 aa	Known RBP	4.98	□□□□□ -1.61
DOC1	YGL240W	YBL081W	P38180	368 aa	Known RBP	4.98	□□□□□ -1.61
DOC1	YGL240W	YBR219C	P38317	127 aa		4.98	□□□□□ -1.61
DOC1	YGL240W	YDR034C-A	P0C289	58 aa		4.97	□□□□□ -1.61
DOC1	YGL240W	YKL069W	P36088	180 aa		4.97	□□□□□ -1.61
DOC1	YGL240W	YAL064W	P39711	94 aa		4.97	□□□□□ -1.61
DOC1	YGL240W	YER134C	P40081	178 aa		4.97	□□□□□ -1.61
DOC1	YGL240W	YGL118C	P53132	145 aa		4.97	□□□□□ -1.61
DOC1	YGL240W	ARL3	Q02804	198 aa		4.97	□□□□□ -1.61
DOC1	YGL240W	PKR1	Q03880	122 aa	Known RBP	4.97	□□□□□ -1.61
DOC1	YGL240W	YCL021W-A	Q96VH3	125 aa		4.97	□□□□□ -1.61
DOC1	YGL240W	HMRA2	P0CY13	119 aa		4.96	□□□□□ -1.62
DOC1	YGL240W	DUT1	P33317	147 aa		4.96	□□□□□ -1.62
DOC1	YGL240W	RPC10	P40422	70 aa		4.96	□□□□□ -1.62
DOC1	YGL240W	URM1	P40554	99 aa	Predicted RBP	4.96	□□□□□ -1.62
DOC1	YGL240W	TPT1	Q12272	230 aa	Known RBP	4.96	□□□□□ -1.62
DOC1	YGL240W	ERV14	P53173	138 aa		4.95	□□□□□ -1.62
DOC1	YGL240W	YDR042C	Q03205	200 aa		4.95	□□□□□ -1.62
DOC1	YGL240W	ENV10	Q99382	181 aa		4.95	□□□□□ -1.62
DOC1	YGL240W	YMR295C	Q03559	197 aa		4.94	□□□□□ -1.62
DOC1	YGL240W	YLR112W	Q12130	139 aa		4.94	□□□□□ -1.62
DOC1	YGL240W	COA3	Q3E7B2	85 aa		4.94	□□□□□ -1.62
DOC1	YGL240W	OST3	P48439	350 aa		4.93	□□□□□ -1.62
DOC1	YGL240W	TIM11	P81449	96 aa	Predicted RBP	4.93	□□□□□ -1.62
DOC1	YGL240W	YLR194C	Q05777	254 aa		4.93	□□□□□ -1.62
DOC1	YGL240W	RPL31A	P0C2H8	113 aa	Known RBP	4.92	□□□□□ -1.62
DOC1	YGL240W	POP3	P53833	195 aa	Predicted RBP	4.92	□□□□□ -1.62
DOC1	YGL240W	HTL1	Q9URQ5	78 aa		4.92	□□□□□ -1.62
DOC1	YGL240W	ATP15	P21306	62 aa		4.91	□□□□□ -1.62
DOC1	YGL240W	CIN5	P40917	295 aa		4.91	□□□□□ -1.62
DOC1	YGL240W	YML108W	Q03759	105 aa		4.91	□□□□□ -1.62
DOC1	YGL240W	RPL27B	P0C2H7	136 aa	Known RBP	4.9	□□□□□ -1.63
DOC1	YGL240W	SMP1	P38128	452 aa		4.9	□□□□□ -1.63
DOC1	YGL240W	YAR029W	P39549	74 aa		4.9	□□□□□ -1.63
DOC1	YGL240W	SNA2	P56508	79 aa		4.9	□□□□□ -1.63
DOC1	YGL240W	YDR029W	Q12111	104 aa		4.9	□□□□□ -1.63
DOC1	YGL240W	YMR175W-A	Q3E766	64 aa		4.9	□□□□□ -1.63
DOC1	YGL240W	APS1	P35181	156 aa		4.89	□□□□□ -1.63
DOC1	YGL240W	YFL067W	P43537	175 aa		4.89	□□□□□ -1.63
DOC1	YGL240W	YMR103C	Q04436	120 aa		4.89	□□□□□ -1.63
DOC1	YGL240W	CMC2	Q3E7A4	109 aa		4.89	□□□□□ -1.63
DOC1	YGL240W	YAL065C	O13511	128 aa		4.88	□□□□□ -1.63
DOC1	YGL240W	MRPL33	P20084	86 aa		4.88	□□□□□ -1.63
DOC1	YGL240W	YKL070W	P36087	169 aa		4.87	□□□□□ -1.63
DOC1	YGL240W	FYV4	P38783	130 aa	Predicted RBP	4.87	□□□□□ -1.63
DOC1	YGL240W	DFM1	Q12743	341 aa	Known RBP	4.87	□□□□□ -1.63
DOC1	YGL240W	YLR307C-A	Q3E825	87 aa		4.86	□□□□□ -1.63
DOC1	YGL240W	YDL022C-A	P0C5L6	82 aa		4.85	□□□□□ -1.63
DOC1	YGL240W	VTC1	P40046	129 aa	RIP-Chip data	4.85	□□□□□ -1.63	not detected
DOC1	YGL240W	CUE4	Q04201	117 aa	Predicted RBP	4.85	□□□□□ -1.63
DOC1	YGL240W	SEN15	Q04675	128 aa		4.85	□□□□□ -1.63
DOC1	YGL240W	SSS1	P35179	80 aa		4.84	□□□□□ -1.63
DOC1	YGL240W	SHU1	P38751	150 aa		4.84	□□□□□ -1.63
DOC1	YGL240W	COX14	P39103	70 aa		4.84	□□□□□ -1.63
DOC1	YGL240W	PEX22	P39718	180 aa		4.84	□□□□□ -1.63
DOC1	YGL240W	AIM11	P87275	137 aa		4.84	□□□□□ -1.63
DOC1	YGL240W	YDL241W	Q07738	123 aa		4.83	□□□□□ -1.64
DOC1	YGL240W	SCS22	Q6Q595	175 aa		4.83	□□□□□ -1.64
DOC1	YGL240W	YJL197C-A	P0C5P0	93 aa		4.82	□□□□□ -1.64
DOC1	YGL240W	LCL1	Q02786	101 aa		4.82	□□□□□ -1.64
DOC1	YGL240W	YPL261C	Q08976	102 aa		4.82	□□□□□ -1.64
DOC1	YGL240W	TOA2	P32774	122 aa		4.81	□□□□□ -1.64
DOC1	YGL240W	PAU16	P35994	123 aa		4.81	□□□□□ -1.64
DOC1	YGL240W	YIL134C-A	Q45U18	67 aa		4.81	□□□□□ -1.64
DOC1	YGL240W	STF1	P01098	86 aa		4.79	□□□□□ -1.64
DOC1	YGL240W	AQY2	P0CD90	149 aa		4.79	□□□□□ -1.64
DOC1	YGL240W	RPL18A	P0CX49	186 aa	Known RBP	4.79	□□□□□ -1.64
DOC1	YGL240W	RPL18B	P0CX50	186 aa	Known RBP	4.79	□□□□□ -1.64
DOC1	YGL240W	YKR041W	P36134	250 aa		4.79	□□□□□ -1.64
DOC1	YGL240W	MRPL11	P36521	249 aa	Predicted RBP	4.79	□□□□□ -1.64
DOC1	YGL240W	MRPS12	P53732	153 aa		4.79	□□□□□ -1.64
DOC1	YGL240W	SMD1	Q02260	146 aa	Predicted RBP	4.79	□□□□□ -1.64
DOC1	YGL240W	YLR050C	Q12155	161 aa	Known RBP	4.79	□□□□□ -1.64
DOC1	YGL240W	RPL32	P38061	130 aa	Known RBP	4.78	□□□□□ -1.64
DOC1	YGL240W	OXA1	P39952	402 aa		4.78	□□□□□ -1.64
DOC1	YGL240W	PEX17	P40155	199 aa		4.78	□□□□□ -1.64
DOC1	YGL240W	CNL1	Q06333	122 aa		4.78	□□□□□ -1.64
DOC1	YGL240W	PPT2	Q12036	173 aa		4.78	□□□□□ -1.64
DOC1	YGL240W	ECM12	O13529	151 aa		4.77	□□□□□ -1.65
DOC1	YGL240W	ADH1	P00330	348 aa	Known RBP	4.77	□□□□□ -1.65
DOC1	YGL240W	YEL067C	P39978	195 aa		4.77	□□□□□ -1.65
DOC1	YGL240W	HAC1	P41546	238 aa		4.77	□□□□□ -1.65
DOC1	YGL240W	CWP2	P43497	92 aa		4.77	□□□□□ -1.65
DOC1	YGL240W	MMS2	P53152	137 aa		4.77	□□□□□ -1.65
DOC1	YGL240W	SEC11	P15367	167 aa		4.76	□□□□□ -1.65
DOC1	YGL240W	ATP16	Q12165	160 aa		4.76	□□□□□ -1.65
DOC1	YGL240W	YGL041C-B	Q3E750	60 aa		4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms