RNA–Protein interactions for RNA: YEL052W

AFG1, Transcript of Protein that may act as a chaperone for cytochrome c oxidase subunits, yeast

Gene AFG1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AFG1	YEL052W	Q0297	Q9ZZV8	51 aa		4.93	□□□□□ -1.62
AFG1	YEL052W	MRS3	P10566	314 aa		4.92	□□□□□ -1.62
AFG1	YEL052W	ROX3	P25046	220 aa		4.92	□□□□□ -1.62
AFG1	YEL052W	ATP23	P53722	227 aa		4.92	□□□□□ -1.62
AFG1	YEL052W	YMR103C	Q04436	120 aa		4.92	□□□□□ -1.62
AFG1	YEL052W	YBL112C	Q3E7Y4	105 aa		4.92	□□□□□ -1.62
AFG1	YEL052W	FPR2	P32472	135 aa		4.92	□□□□□ -1.62
AFG1	YEL052W	CTR2	P38865	189 aa		4.92	□□□□□ -1.62
AFG1	YEL052W	SBH1	P52870	82 aa		4.92	□□□□□ -1.62
AFG1	YEL052W	TOS8	P53147	276 aa		4.92	□□□□□ -1.62
AFG1	YEL052W	YHP1	Q04116	353 aa		4.92	□□□□□ -1.62
AFG1	YEL052W	SHH4	Q06236	168 aa		4.92	□□□□□ -1.62
AFG1	YEL052W	YOR097C	Q12274	175 aa	Predicted RBP	4.92	□□□□□ -1.62
AFG1	YEL052W	YNL277W-A	Q3E7Z0	62 aa		4.92	□□□□□ -1.62
AFG1	YEL052W	KTI11	Q3E840	82 aa		4.92	□□□□□ -1.62
AFG1	YEL052W	YER175W-A	Q8TGU4	54 aa		4.92	□□□□□ -1.62
AFG1	YEL052W	VMA11	P32842	164 aa		4.91	□□□□□ -1.62
AFG1	YEL052W	NCA3	P46955	337 aa		4.91	□□□□□ -1.62
AFG1	YEL052W	TOM7	P53507	60 aa		4.91	□□□□□ -1.62
AFG1	YEL052W	LSM6	Q06406	86 aa	Known RBP	4.91	□□□□□ -1.62
AFG1	YEL052W	YDR119W-A	Q2V2P9	66 aa		4.91	□□□□□ -1.62
AFG1	YEL052W	YCL048W-A	Q2V2Q2	79 aa		4.91	□□□□□ -1.62
AFG1	YEL052W	ENV10	Q99382	181 aa		4.91	□□□□□ -1.62
AFG1	YEL052W	PET8	P38921	284 aa		4.9	□□□□□ -1.63
AFG1	YEL052W	YIL059C	P40520	121 aa		4.9	□□□□□ -1.63
AFG1	YEL052W	LST8	P41318	303 aa		4.9	□□□□□ -1.63
AFG1	YEL052W	COX12	Q01519	83 aa		4.9	□□□□□ -1.63
AFG1	YEL052W	YLR042C	Q07990	161 aa		4.9	□□□□□ -1.63
AFG1	YEL052W	YMR105W-A	Q8TGS8	64 aa		4.9	□□□□□ -1.63
AFG1	YEL052W	YLR415C	O13578	112 aa		4.89	□□□□□ -1.63
AFG1	YEL052W	PIS1	P06197	220 aa	Known RBP	4.89	□□□□□ -1.63
AFG1	YEL052W	UBC5	P15732	148 aa		4.89	□□□□□ -1.63
AFG1	YEL052W	YCL042W	P25572	119 aa		4.89	□□□□□ -1.63
AFG1	YEL052W	YCR085W	P25650	117 aa		4.89	□□□□□ -1.63
AFG1	YEL052W	YIR020C	P40575	100 aa		4.89	□□□□□ -1.63
AFG1	YEL052W	CWP2	P43497	92 aa		4.89	□□□□□ -1.63
AFG1	YEL052W	SFT1	P43682	97 aa		4.89	□□□□□ -1.63
AFG1	YEL052W	PIR5	P46999	287 aa		4.89	□□□□□ -1.63
AFG1	YEL052W	RPL16B	P26785	198 aa	Known RBP	4.88	□□□□□ -1.63
AFG1	YEL052W	GPI18	P38211	433 aa		4.88	□□□□□ -1.63
AFG1	YEL052W	YNL217W	P40152	326 aa		4.88	□□□□□ -1.63
AFG1	YEL052W	HUA1	P40325	198 aa		4.88	□□□□□ -1.63
AFG1	YEL052W	YLR112W	Q12130	139 aa		4.88	□□□□□ -1.63
AFG1	YEL052W	URA2	P07259	2214 aa	Known RBP	4.88	□□□□□ -1.63
AFG1	YEL052W	SPT4	P32914	102 aa	Predicted RBP	4.87	□□□□□ -1.63
AFG1	YEL052W	MGR2	Q02889	113 aa		4.87	□□□□□ -1.63
AFG1	YEL052W	YLR412C-A	Q3E742	68 aa		4.87	□□□□□ -1.63
AFG1	YEL052W	MID2	P36027	376 aa		4.87	□□□□□ -1.63
AFG1	YEL052W	YKR032W	P36127	104 aa		4.87	□□□□□ -1.63
AFG1	YEL052W	YEL067C	P39978	195 aa		4.87	□□□□□ -1.63
AFG1	YEL052W	KEG1	P43614	200 aa		4.87	□□□□□ -1.63
AFG1	YEL052W	YPS5	P53057	165 aa		4.87	□□□□□ -1.63
AFG1	YEL052W	YNR077C	P53758	84 aa		4.87	□□□□□ -1.63
AFG1	YEL052W	ECM12	O13529	151 aa		4.86	□□□□□ -1.63
AFG1	YEL052W	FIP1	P45976	327 aa		4.85	□□□□□ -1.63
AFG1	YEL052W	SKI6	P46948	246 aa	Predicted RBP	4.85	□□□□□ -1.63
AFG1	YEL052W	CAX4	P53223	239 aa		4.85	□□□□□ -1.63
AFG1	YEL052W	DAD4	P69851	72 aa		4.85	□□□□□ -1.63
AFG1	YEL052W	FCF1	Q05498	189 aa	Predicted RBP	4.85	□□□□□ -1.63
AFG1	YEL052W	Q0255	P03881	472 aa		4.84	□□□□□ -1.63
AFG1	YEL052W	AQY1	P0CD91	305 aa		4.84	□□□□□ -1.63
AFG1	YEL052W	YFL015C	P43578	164 aa		4.84	□□□□□ -1.63
AFG1	YEL052W	YPL261C	Q08976	102 aa		4.84	□□□□□ -1.63
AFG1	YEL052W	DAD1	Q12248	94 aa		4.84	□□□□□ -1.63
AFG1	YEL052W	NRG2	P38082	220 aa		4.83	□□□□□ -1.64
AFG1	YEL052W	YHR140W	P38842	239 aa		4.83	□□□□□ -1.64
AFG1	YEL052W	SPG4	Q04438	115 aa		4.83	□□□□□ -1.64
AFG1	YEL052W	PFY1	P07274	126 aa		4.82	□□□□□ -1.64
AFG1	YEL052W	YHL042W	P38729	150 aa		4.82	□□□□□ -1.64
AFG1	YEL052W	KNH1	P50112	268 aa		4.82	□□□□□ -1.64
AFG1	YEL052W	YGR018C	P53211	109 aa		4.82	□□□□□ -1.64
AFG1	YEL052W	GPI19	Q04082	140 aa		4.82	□□□□□ -1.64
AFG1	YEL052W	YDR029W	Q12111	104 aa		4.82	□□□□□ -1.64
AFG1	YEL052W	YCL021W-A	Q96VH3	125 aa		4.82	□□□□□ -1.64
AFG1	YEL052W	YHR139C-A	O13536	103 aa		4.82	□□□□□ -1.64
AFG1	YEL052W	YDL022C-A	P0C5L6	82 aa		4.82	□□□□□ -1.64
AFG1	YEL052W	RPS8A	P0CX39	200 aa	Known RBP	4.82	□□□□□ -1.64
AFG1	YEL052W	RPS8B	P0CX40	200 aa	Known RBP	4.82	□□□□□ -1.64
AFG1	YEL052W	YCR022C	P25620	114 aa		4.82	□□□□□ -1.64
AFG1	YEL052W	VPS55	P47111	140 aa		4.82	□□□□□ -1.64
AFG1	YEL052W	TOS6	P48560	102 aa		4.82	□□□□□ -1.64
AFG1	YEL052W	TIM22	Q12328	207 aa		4.82	□□□□□ -1.64
AFG1	YEL052W	TOM6	P33448	61 aa		4.81	□□□□□ -1.64
AFG1	YEL052W	YBL071C	P38185	102 aa		4.81	□□□□□ -1.64
AFG1	YEL052W	YMR141C	P40211	102 aa		4.81	□□□□□ -1.64
AFG1	YEL052W	YOL160W	Q08321	113 aa		4.81	□□□□□ -1.64
AFG1	YEL052W	COA3	Q3E7B2	85 aa		4.81	□□□□□ -1.64
AFG1	YEL052W	YPL038W-A	Q3E7B4	63 aa		4.81	□□□□□ -1.64
AFG1	YEL052W	RPL15A	P05748	204 aa	Known RBP	4.8	□□□□□ -1.64
AFG1	YEL052W	HMRA2	P0CY13	119 aa		4.8	□□□□□ -1.64
AFG1	YEL052W	SMP1	P38128	452 aa		4.8	□□□□□ -1.64
AFG1	YEL052W	YBL081W	P38180	368 aa	Known RBP	4.8	□□□□□ -1.64
AFG1	YEL052W	DSE2	P38844	325 aa		4.8	□□□□□ -1.64
AFG1	YEL052W	WWM1	P43582	211 aa	Known RBP	4.8	□□□□□ -1.64
AFG1	YEL052W	RPL15B	P54780	204 aa	Predicted RBP	4.8	□□□□□ -1.64
AFG1	YEL052W	YER145C-A	A0A023PYF4	145 aa		4.79	□□□□□ -1.64
AFG1	YEL052W	RPB9	P27999	122 aa		4.79	□□□□□ -1.64
AFG1	YEL052W	VTC1	P40046	129 aa	RIP-Chip data	4.79	□□□□□ -1.64	not detected
AFG1	YEL052W	YGL034C	P53186	121 aa		4.79	□□□□□ -1.64
AFG1	YEL052W	TSC3	Q3E790	80 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms