RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	YBR219C	P38317	127 aa		4.24	□□□□□ -1.73
CDC1	YDR182W	CIN5	P40917	295 aa		4.24	□□□□□ -1.73
CDC1	YDR182W	YJR146W	P47174	117 aa		4.24	□□□□□ -1.73
CDC1	YDR182W	LCL1	Q02786	101 aa		4.24	□□□□□ -1.73
CDC1	YDR182W	YLR194C	Q05777	254 aa		4.24	□□□□□ -1.73
CDC1	YDR182W	YLR118C	Q12354	227 aa		4.24	□□□□□ -1.73
CDC1	YDR182W	SEC4	P07560	215 aa	Known RBP	4.23	□□□□□ -1.73
CDC1	YDR182W	RPC10	P40422	70 aa		4.23	□□□□□ -1.73
CDC1	YDR182W	OST3	P48439	350 aa		4.23	□□□□□ -1.73
CDC1	YDR182W	MMS2	P53152	137 aa		4.23	□□□□□ -1.73
CDC1	YDR182W	YPR014C	Q6B0W2	109 aa		4.23	□□□□□ -1.73
CDC1	YDR182W	YCL021W-A	Q96VH3	125 aa		4.23	□□□□□ -1.73
CDC1	YDR182W	PRE1	P22141	198 aa	Known RBP	4.22	□□□□□ -1.73
CDC1	YDR182W	YEL008W	P40001	126 aa		4.22	□□□□□ -1.73
CDC1	YDR182W	YCR024C-B	Q3E7Z8	88 aa		4.22	□□□□□ -1.73
CDC1	YDR182W	ENV10	Q99382	181 aa		4.22	□□□□□ -1.73
CDC1	YDR182W	PFY1	P07274	126 aa		4.21	□□□□□ -1.74
CDC1	YDR182W	ATG8	P38182	117 aa	RIP-Chip data	4.21	□□□□□ -1.74	not detected
CDC1	YDR182W	TRP1	P00912	224 aa		4.2	□□□□□ -1.74
CDC1	YDR182W	AQY1	P0CD91	305 aa		4.2	□□□□□ -1.74
CDC1	YDR182W	DDR48	P18899	430 aa	Known RBP	4.2	□□□□□ -1.74
CDC1	YDR182W	DAN1	P47178	298 aa		4.2	□□□□□ -1.74
CDC1	YDR182W	YIL014C-A	Q02598	104 aa		4.2	□□□□□ -1.74
CDC1	YDR182W	TPT1	Q12272	230 aa	Known RBP	4.2	□□□□□ -1.74
CDC1	YDR182W	PEX22	P39718	180 aa		4.19	□□□□□ -1.74
CDC1	YDR182W	PAU15	P40585	124 aa		4.19	□□□□□ -1.74
CDC1	YDR182W	MGR2	Q02889	113 aa		4.19	□□□□□ -1.74
CDC1	YDR182W	YMR295C	Q03559	197 aa		4.18	□□□□□ -1.74
CDC1	YDR182W	ERG27	Q12452	347 aa	Known RBP	4.18	□□□□□ -1.74
CDC1	YDR182W	YOR008C-A	Q3E7B9	74 aa		4.18	□□□□□ -1.74
CDC1	YDR182W	POR1	P04840	283 aa	Known RBP	4.18	□□□□□ -1.74
CDC1	YDR182W	YJL197C-A	P0C5P0	93 aa		4.18	□□□□□ -1.74
CDC1	YDR182W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.17	□□□□□ -1.74
CDC1	YDR182W	HMRA2	P0CY13	119 aa		4.16	□□□□□ -1.74
CDC1	YDR182W	RPL32	P38061	130 aa	Known RBP	4.16	□□□□□ -1.74
CDC1	YDR182W	TOS6	P48560	102 aa		4.16	□□□□□ -1.74
CDC1	YDR182W	PKR1	Q03880	122 aa	Known RBP	4.16	□□□□□ -1.74
CDC1	YDR182W	YMR175W-A	Q3E766	64 aa		4.16	□□□□□ -1.74
CDC1	YDR182W	CNB1	P25296	175 aa		4.15	□□□□□ -1.75
CDC1	YDR182W	VTC1	P40046	129 aa	RIP-Chip data	4.15	□□□□□ -1.75	not detected
CDC1	YDR182W	APS1	P35181	156 aa		4.14	□□□□□ -1.75
CDC1	YDR182W	YKL070W	P36087	169 aa		4.14	□□□□□ -1.75
CDC1	YDR182W	YAR029W	P39549	74 aa		4.14	□□□□□ -1.75
CDC1	YDR182W	AIM19	P40502	157 aa		4.14	□□□□□ -1.75
CDC1	YDR182W	YAL065C	O13511	128 aa		4.13	□□□□□ -1.75
CDC1	YDR182W	NSE4	P43124	402 aa		4.13	□□□□□ -1.75
CDC1	YDR182W	EOS1	P53938	366 aa		4.13	□□□□□ -1.75
CDC1	YDR182W	YDR010C	Q12426	110 aa		4.12	□□□□□ -1.75
CDC1	YDR182W	ECM12	O13529	151 aa		4.11	□□□□□ -1.75
CDC1	YDR182W	PAU19	P0CE85	124 aa		4.11	□□□□□ -1.75
CDC1	YDR182W	PAU21	P0CE86	164 aa		4.11	□□□□□ -1.75
CDC1	YDR182W	PAU22	P0CE87	164 aa		4.11	□□□□□ -1.75
CDC1	YDR182W	ATP15	P21306	62 aa		4.11	□□□□□ -1.75
CDC1	YDR182W	PAU3	P25610	124 aa		4.11	□□□□□ -1.75
CDC1	YDR182W	CWP2	P43497	92 aa		4.11	□□□□□ -1.75
CDC1	YDR182W	COA3	Q3E7B2	85 aa		4.11	□□□□□ -1.75
CDC1	YDR182W	RPL31A	P0C2H8	113 aa	Known RBP	4.11	□□□□□ -1.75
CDC1	YDR182W	ERV14	P53173	138 aa		4.11	□□□□□ -1.75
CDC1	YDR182W	CYT2	Q00873	224 aa		4.1	□□□□□ -1.75
CDC1	YDR182W	YBL112C	Q3E7Y4	105 aa		4.1	□□□□□ -1.75
CDC1	YDR182W	AQY2	P0CD90	149 aa		4.09	□□□□□ -1.75
CDC1	YDR182W	GSP1	P32835	219 aa	Known RBP	4.09	□□□□□ -1.75
CDC1	YDR182W	GSP2	P32836	220 aa	Known RBP	4.09	□□□□□ -1.75
CDC1	YDR182W	YGL118C	P53132	145 aa		4.09	□□□□□ -1.75
CDC1	YDR182W	YLR112W	Q12130	139 aa		4.09	□□□□□ -1.75
CDC1	YDR182W	YGL041C-B	Q3E750	60 aa		4.09	□□□□□ -1.75
CDC1	YDR182W	CMC2	Q3E7A4	109 aa		4.09	□□□□□ -1.75
CDC1	YDR182W	HAC1	P41546	238 aa		4.07	□□□□□ -1.76
CDC1	YDR182W	HHO1	P53551	258 aa		4.07	□□□□□ -1.76
CDC1	YDR182W	SMD1	Q02260	146 aa	Predicted RBP	4.07	□□□□□ -1.76
CDC1	YDR182W	YDR042C	Q03205	200 aa		4.07	□□□□□ -1.76
CDC1	YDR182W	Q0032	Q9ZZX7	96 aa		4.07	□□□□□ -1.76
CDC1	YDR182W	HYP2	P23301	157 aa	Known RBP	4.06	□□□□□ -1.76
CDC1	YDR182W	COX14	P39103	70 aa		4.06	□□□□□ -1.76
CDC1	YDR182W	OXA1	P39952	402 aa		4.06	□□□□□ -1.76
CDC1	YDR182W	YER134C	P40081	178 aa		4.06	□□□□□ -1.76
CDC1	YDR182W	YDL241W	Q07738	123 aa		4.06	□□□□□ -1.76
CDC1	YDR182W	PAU16	P35994	123 aa		4.05	□□□□□ -1.76
CDC1	YDR182W	POP3	P53833	195 aa	Predicted RBP	4.05	□□□□□ -1.76
CDC1	YDR182W	ZEO1	Q08245	113 aa		4.05	□□□□□ -1.76
CDC1	YDR182W	TMA7	Q3E764	64 aa	Known RBP	4.05	□□□□□ -1.76
CDC1	YDR182W	SHU1	P38751	150 aa		4.05	□□□□□ -1.76
CDC1	YDR182W	RPF1	P38805	295 aa	Known RBP	4.05	□□□□□ -1.76
CDC1	YDR182W	IGD1	P43598	195 aa		4.05	□□□□□ -1.76
CDC1	YDR182W	YGL149W	P53116	101 aa		4.05	□□□□□ -1.76
CDC1	YDR182W	YMR103C	Q04436	120 aa		4.05	□□□□□ -1.76
CDC1	YDR182W	TOA2	P32774	122 aa		4.04	□□□□□ -1.76
CDC1	YDR182W	AIM11	P87275	137 aa		4.04	□□□□□ -1.76
CDC1	YDR182W	YNL162W-A	Q3E7A8	72 aa		4.04	□□□□□ -1.76
CDC1	YDR182W	HTL1	Q9URQ5	78 aa		4.04	□□□□□ -1.76
CDC1	YDR182W	RPL27B	P0C2H7	136 aa	Known RBP	4.03	□□□□□ -1.76
CDC1	YDR182W	FYV4	P38783	130 aa	Predicted RBP	4.03	□□□□□ -1.76
CDC1	YDR182W	MVB12	P42939	101 aa		4.03	□□□□□ -1.76
CDC1	YDR182W	RPL18A	P0CX49	186 aa	Known RBP	4.02	□□□□□ -1.77
CDC1	YDR182W	RPL18B	P0CX50	186 aa	Known RBP	4.02	□□□□□ -1.77
CDC1	YDR182W	GTT1	P40582	234 aa		4.02	□□□□□ -1.77
CDC1	YDR182W	ABF2	Q02486	183 aa		4.02	□□□□□ -1.77
CDC1	YDR182W	PPT2	Q12036	173 aa		4.02	□□□□□ -1.77
CDC1	YDR182W	STF1	P01098	86 aa		4.01	□□□□□ -1.77
CDC1	YDR182W	YDL022C-A	P0C5L6	82 aa		4.01	□□□□□ -1.77

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