RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	FAS1	P07149	2051 aa	Known RBP	3.26	□□□□□ -1.89
LCB2	YDR062W	YBR056W-A	I2HB52	66 aa		3.25	□□□□□ -1.89
LCB2	YDR062W	VAR1	P02381	398 aa		3.25	□□□□□ -1.89
LCB2	YDR062W	SMX2	P40204	77 aa	Known RBP	3.25	□□□□□ -1.89
LCB2	YDR062W	YIL086C	P40503	102 aa		3.25	□□□□□ -1.89
LCB2	YDR062W	PAM16	P42949	149 aa		3.25	□□□□□ -1.89
LCB2	YDR062W	BAT2	P47176	376 aa	Known RBP	3.25	□□□□□ -1.89
LCB2	YDR062W	RPL22B	P56628	122 aa	Known RBP	3.25	□□□□□ -1.89
LCB2	YDR062W	FLO9	P39712	1322 aa		3.24	□□□□□ -1.89
LCB2	YDR062W	RCE1	Q03530	315 aa		3.24	□□□□□ -1.89
LCB2	YDR062W	BUD23	P25627	275 aa	Predicted RBP	3.24	□□□□□ -1.89
LCB2	YDR062W	YCR099C	P25657	155 aa		3.24	□□□□□ -1.89
LCB2	YDR062W	CMC4	Q3E7A9	73 aa		3.24	□□□□□ -1.89
LCB2	YDR062W	YKL044W	P36092	106 aa		3.23	□□□□□ -1.89
LCB2	YDR062W	YEL014C	P39999	101 aa		3.23	□□□□□ -1.89
LCB2	YDR062W	ERV14	P53173	138 aa		3.22	□□□□□ -1.89
LCB2	YDR062W	ZEO1	Q08245	113 aa		3.22	□□□□□ -1.89
LCB2	YDR062W	NAT5	Q08689	176 aa		3.22	□□□□□ -1.89
LCB2	YDR062W	UTP20	P35194	2493 aa	Known RBP	3.22	□□□□□ -1.89
LCB2	YDR062W	SEC59	P20048	519 aa		3.21	□□□□□ -1.9
LCB2	YDR062W	IPT1	P38954	527 aa		3.21	□□□□□ -1.9
LCB2	YDR062W	PEP8	P40335	379 aa		3.21	□□□□□ -1.9
LCB2	YDR062W	AVO2	Q04749	426 aa		3.21	□□□□□ -1.9
LCB2	YDR062W	CYR1	P08678	2026 aa	Known RBP	3.21	□□□□□ -1.9
LCB2	YDR062W	YBR032W	P38223	100 aa		3.2	□□□□□ -1.9
LCB2	YDR062W	SNF11	P38956	169 aa		3.2	□□□□□ -1.9
LCB2	YDR062W	YFR035C	P43608	114 aa		3.2	□□□□□ -1.9
LCB2	YDR062W	RGM1	Q00453	211 aa		3.2	□□□□□ -1.9
LCB2	YDR062W	HSP150	P32478	413 aa		3.2	□□□□□ -1.9
LCB2	YDR062W	ECM31	P38122	312 aa		3.2	□□□□□ -1.9
LCB2	YDR062W	GNA1	P43577	159 aa	Predicted RBP	3.2	□□□□□ -1.9
LCB2	YDR062W	GPI11	Q06636	219 aa		3.2	□□□□□ -1.9
LCB2	YDR062W	PAU21	P0CE86	164 aa		3.19	□□□□□ -1.9
LCB2	YDR062W	PAU22	P0CE87	164 aa		3.19	□□□□□ -1.9
LCB2	YDR062W	TDA2	P40045	126 aa		3.19	□□□□□ -1.9
LCB2	YDR062W	DCV1	P43595	202 aa		3.19	□□□□□ -1.9
LCB2	YDR062W	NHP10	Q03435	203 aa		3.19	□□□□□ -1.9
LCB2	YDR062W	NRG2	P38082	220 aa		3.18	□□□□□ -1.9
LCB2	YDR062W	YBR090C	P38253	122 aa		3.18	□□□□□ -1.9
LCB2	YDR062W	HSP10	P38910	106 aa		3.18	□□□□□ -1.9
LCB2	YDR062W	YGL149W	P53116	101 aa		3.18	□□□□□ -1.9
LCB2	YDR062W	BRP1	P53194	125 aa		3.18	□□□□□ -1.9
LCB2	YDR062W	YHR086W-A	Q3E746	53 aa		3.18	□□□□□ -1.9
LCB2	YDR062W	FUN14	P18411	198 aa		3.17	□□□□□ -1.9
LCB2	YDR062W	YBR219C	P38317	127 aa		3.17	□□□□□ -1.9
LCB2	YDR062W	YGR164W	P53291	111 aa		3.17	□□□□□ -1.9
LCB2	YDR062W	GPI19	Q04082	140 aa		3.17	□□□□□ -1.9
LCB2	YDR062W	TRA1	P38811	3744 aa		3.16	□□□□□ -1.9
LCB2	YDR062W	YPL067C	Q02754	198 aa		3.16	□□□□□ -1.9
LCB2	YDR062W	YLR162W	Q06235	118 aa		3.16	□□□□□ -1.9
LCB2	YDR062W	YOR032W-A	Q8TGS1	66 aa		3.16	□□□□□ -1.9
LCB2	YDR062W	MED11	Q99278	115 aa		3.16	□□□□□ -1.9
LCB2	YDR062W	RPS27A	P35997	82 aa	Known RBP	3.15	□□□□□ -1.9
LCB2	YDR062W	RPS27B	P38711	82 aa		3.15	□□□□□ -1.9
LCB2	YDR062W	SLH1	P53327	1967 aa	Known RBP	3.14	□□□□□ -1.91
LCB2	YDR062W	HAP3	P13434	144 aa		3.14	□□□□□ -1.91
LCB2	YDR062W	UBC5	P15732	148 aa		3.14	□□□□□ -1.91
LCB2	YDR062W	RPL13A	Q12690	199 aa	Predicted RBP	3.14	□□□□□ -1.91
LCB2	YDR062W	PDX3	P38075	228 aa	Known RBP	3.14	□□□□□ -1.91
LCB2	YDR062W	YEA6	P39953	335 aa		3.14	□□□□□ -1.91
LCB2	YDR062W	YFL051C	P43552	160 aa		3.14	□□□□□ -1.91
LCB2	YDR062W	YAE1	P47118	141 aa	Predicted RBP	3.14	□□□□□ -1.91
LCB2	YDR062W	YMR103C	Q04436	120 aa		3.14	□□□□□ -1.91
LCB2	YDR062W	TAR1	Q8TGM6	124 aa		3.14	□□□□□ -1.91
LCB2	YDR062W	HYP2	P23301	157 aa	Known RBP	3.13	□□□□□ -1.91
LCB2	YDR062W	YCL042W	P25572	119 aa		3.13	□□□□□ -1.91
LCB2	YDR062W	EMP24	P32803	203 aa	Known RBP	3.13	□□□□□ -1.91
LCB2	YDR062W	YCL001W-B	Q96VH2	84 aa		3.13	□□□□□ -1.91
LCB2	YDR062W	YEL008W	P40001	126 aa		3.11	□□□□□ -1.91
LCB2	YDR062W	COA4	Q05809	96 aa		3.11	□□□□□ -1.91
LCB2	YDR062W	YLR365W	Q7LIF2	110 aa		3.11	□□□□□ -1.91
LCB2	YDR062W	MHF1	Q3E835	90 aa		3.11	□□□□□ -1.91
LCB2	YDR062W	RTC6	O14464	93 aa		3.09	□□□□□ -1.91
LCB2	YDR062W	QCR8	P08525	94 aa		3.09	□□□□□ -1.91
LCB2	YDR062W	YSF3	P0C074	85 aa	Predicted RBP	3.08	□□□□□ -1.92
LCB2	YDR062W	PRE1	P22141	198 aa	Known RBP	3.08	□□□□□ -1.92
LCB2	YDR062W	YHR130C	P38834	111 aa		3.08	□□□□□ -1.92
LCB2	YDR062W	YNL146C-A	Q3E7Z1	64 aa		3.08	□□□□□ -1.92
LCB2	YDR062W	MRPL11	P36521	249 aa	Predicted RBP	3.08	□□□□□ -1.92
LCB2	YDR062W	RPL13B	P40212	199 aa	Known RBP	3.08	□□□□□ -1.92
LCB2	YDR062W	IGO1	P53897	168 aa		3.08	□□□□□ -1.92
LCB2	YDR062W	YPL261C	Q08976	102 aa		3.08	□□□□□ -1.92
LCB2	YDR062W	SEC16	P48415	2195 aa	Known RBP	3.07	□□□□□ -1.92
LCB2	YDR062W	YER187W	P40102	141 aa		3.07	□□□□□ -1.92
LCB2	YDR062W	YMR090W	Q04304	227 aa	Known RBP	3.07	□□□□□ -1.92
LCB2	YDR062W	YBR242W	P38331	238 aa		3.06	□□□□□ -1.92
LCB2	YDR062W	YFR010W-A	P0C5N0	62 aa		3.05	□□□□□ -1.92
LCB2	YDR062W	PAU12	P53343	120 aa		3.05	□□□□□ -1.92
LCB2	YDR062W	YLR296W	Q05898	108 aa		3.05	□□□□□ -1.92
LCB2	YDR062W	COA3	Q3E7B2	85 aa		3.05	□□□□□ -1.92
LCB2	YDR062W	DAD1	Q12248	94 aa		3.04	□□□□□ -1.92
LCB2	YDR062W	OST5	Q92316	86 aa		3.04	□□□□□ -1.92
LCB2	YDR062W	RPL36B	O14455	100 aa	Known RBP	3.04	□□□□□ -1.92
LCB2	YDR062W	RPL36A	P05745	100 aa	Predicted RBP	3.04	□□□□□ -1.92
LCB2	YDR062W	YHR214C-D	P0CX93	97 aa		3.04	□□□□□ -1.92
LCB2	YDR062W	YHR213W	P0CI67	198 aa		3.03	□□□□□ -1.92
LCB2	YDR062W	YBR027C	P38220	110 aa		3.03	□□□□□ -1.92
LCB2	YDR062W	VAM10	Q08474	114 aa		3.03	□□□□□ -1.92
LCB2	YDR062W	YGL014C-A	P0C5N1	53 aa		3.02	□□□□□ -1.93
LCB2	YDR062W	ATG8	P38182	117 aa	RIP-Chip data	3.02	□□□□□ -1.93	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 60.5 ms