RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W RPL16AP26784 199 aaKnown RBP6.07□□□□□ -1.44
ABP1YCR088W RPL16BP26785 198 aaKnown RBP6.07□□□□□ -1.44
ABP1YCR088W YER085CP40058 173 aa6.07□□□□□ -1.44
ABP1YCR088W KEG1P43614 200 aa6.07□□□□□ -1.44
ABP1YCR088W VPS55P47111 140 aa6.07□□□□□ -1.44
ABP1YCR088W YJR146WP47174 117 aa6.07□□□□□ -1.44
ABP1YCR088W YNL146C-AQ3E7Z1 64 aa6.07□□□□□ -1.44
ABP1YCR088W IGO2Q9P305 131 aa6.07□□□□□ -1.44
ABP1YCR088W MID2P36027 376 aa6.06□□□□□ -1.44
ABP1YCR088W YNL194CP40169 301 aa6.06□□□□□ -1.44
ABP1YCR088W URM1P40554 99 aaPredicted RBP6.06□□□□□ -1.44
ABP1YCR088W YFR035CP43608 114 aa6.06□□□□□ -1.44
ABP1YCR088W PRM3Q08931 133 aa6.06□□□□□ -1.44
ABP1YCR088W MSN1P22148 382 aa6.05□□□□□ -1.44
ABP1YCR088W NHP2P32495 156 aaPredicted RBP6.05□□□□□ -1.44
ABP1YCR088W YNL217WP40152 326 aa6.05□□□□□ -1.44
ABP1YCR088W YNL190WP53872 204 aa6.05□□□□□ -1.44
ABP1YCR088W YLR194CQ05777 254 aa6.05□□□□□ -1.44
ABP1YCR088W Q0255P03881 472 aa6.04□□□□□ -1.44
ABP1YCR088W POP7P38291 140 aa6.04□□□□□ -1.44
ABP1YCR088W SIM1P40472 476 aa6.04□□□□□ -1.44
ABP1YCR088W HOR7Q05827 59 aa6.04□□□□□ -1.44
ABP1YCR088W LSM6Q06406 86 aaKnown RBP6.04□□□□□ -1.44
ABP1YCR088W YLR042CQ07990 161 aa6.04□□□□□ -1.44
ABP1YCR088W MRPL23Q12487 163 aaPredicted RBP6.04□□□□□ -1.44
ABP1YCR088W PRP8P33334 2413 aaKnown RBP6.04□□□□□ -1.44
ABP1YCR088W RPL28P02406 149 aaKnown RBP6.03□□□□□ -1.44
ABP1YCR088W MIG3P39943 394 aa6.03□□□□□ -1.44
ABP1YCR088W MRPS12P53732 153 aa6.03□□□□□ -1.44
ABP1YCR088W OST2P46964 130 aa6.03□□□□□ -1.44
ABP1YCR088W ABM1P47146 123 aa6.03□□□□□ -1.44
ABP1YCR088W Q0297Q9ZZV8 51 aa6.03□□□□□ -1.44
ABP1YCR088W YMR244WQ04018 355 aa6.02□□□□□ -1.45
ABP1YCR088W SPG4Q04438 115 aa6.02□□□□□ -1.45
ABP1YCR088W RRT13P40042 185 aa6.01□□□□□ -1.45
ABP1YCR088W YGL088WP53151 121 aa6.01□□□□□ -1.45
ABP1YCR088W YNL092WP53934 400 aa6.01□□□□□ -1.45
ABP1YCR088W TAR1Q8TGM6 124 aa6.01□□□□□ -1.45
ABP1YCR088W RPL18AP0CX49 186 aaKnown RBP6.01□□□□□ -1.45
ABP1YCR088W RPL18BP0CX50 186 aaKnown RBP6.01□□□□□ -1.45
ABP1YCR088W ATX1P38636 73 aa6.01□□□□□ -1.45
ABP1YCR088W INO4P13902 151 aa6□□□□□ -1.45
ABP1YCR088W HPA2Q06592 156 aa6□□□□□ -1.45
ABP1YCR088W SPO24Q3E752 67 aa6□□□□□ -1.45
ABP1YCR088W UGX2P32772 223 aa5.99□□□□□ -1.45
ABP1YCR088W YBR209WP38311 105 aa5.99□□□□□ -1.45
ABP1YCR088W DUT1P33317 147 aa5.98□□□□□ -1.45
ABP1YCR088W YCR041WP37265 110 aa5.98□□□□□ -1.45
ABP1YCR088W MRPS8Q03799 155 aa5.98□□□□□ -1.45
ABP1YCR088W SRL1Q08673 210 aa5.98□□□□□ -1.45
ABP1YCR088W ISD11Q6Q560 94 aa5.98□□□□□ -1.45
ABP1YCR088W RRG8Q06109 277 aa5.98□□□□□ -1.45
ABP1YCR088W CCW14O13547 238 aa5.97□□□□□ -1.45
ABP1YCR088W RPA12P32529 125 aaKnown RBP5.97□□□□□ -1.45
ABP1YCR088W YEL008WP40001 126 aa5.97□□□□□ -1.45
ABP1YCR088W TRP1P00912 224 aa5.96□□□□□ -1.46
ABP1YCR088W FIP1P45976 327 aa5.96□□□□□ -1.46
ABP1YCR088W MEC1P38111 2368 aa5.95□□□□□ -1.46
ABP1YCR088W RPL15AP05748 204 aaKnown RBP5.95□□□□□ -1.46
ABP1YCR088W SHU1P38751 150 aa5.95□□□□□ -1.46
ABP1YCR088W DSE2P38844 325 aa5.95□□□□□ -1.46
ABP1YCR088W PEX17P40155 199 aa5.95□□□□□ -1.46
ABP1YCR088W YFL065CP43539 102 aa5.95□□□□□ -1.46
ABP1YCR088W YPR203WQ08994 102 aa5.95□□□□□ -1.46
ABP1YCR088W YIA6P40556 373 aa5.94□□□□□ -1.46
ABP1YCR088W YNL184CP53876 108 aa5.94□□□□□ -1.46
ABP1YCR088W YPL229WQ99395 206 aa5.93□□□□□ -1.46
ABP1YCR088W YIL059CP40520 121 aa5.92□□□□□ -1.46
ABP1YCR088W YCL021W-AQ96VH3 125 aa5.92□□□□□ -1.46
ABP1YCR088W COX10P21592 462 aa5.91□□□□□ -1.46
ABP1YCR088W ABF2Q02486 183 aa5.9□□□□□ -1.46
ABP1YCR088W YCR075W-AQ3E830 75 aa5.9□□□□□ -1.47
ABP1YCR088W UBC5P15732 148 aa5.89□□□□□ -1.47
ABP1YCR088W YCH1P42937 148 aa5.88□□□□□ -1.47
ABP1YCR088W EOS1P53938 366 aa5.88□□□□□ -1.47
ABP1YCR088W YBR219CP38317 127 aa5.88□□□□□ -1.47
ABP1YCR088W ALG13P53178 202 aa5.88□□□□□ -1.47
ABP1YCR088W YMR295CQ03559 197 aa5.88□□□□□ -1.47
ABP1YCR088W YER145C-AA0A023PYF4 145 aa5.87□□□□□ -1.47
ABP1YCR088W QCR8P08525 94 aa5.87□□□□□ -1.47
ABP1YCR088W RPL2AP0CX45 254 aaKnown RBP5.87□□□□□ -1.47
ABP1YCR088W RPL2BP0CX46 254 aaKnown RBP5.87□□□□□ -1.47
ABP1YCR088W RPS11AP0CX47 156 aaKnown RBP5.87□□□□□ -1.47
ABP1YCR088W RPS11BP0CX48 156 aaKnown RBP5.87□□□□□ -1.47
ABP1YCR088W RPB9P27999 122 aa5.87□□□□□ -1.47
ABP1YCR088W NRG2P38082 220 aa5.87□□□□□ -1.47
ABP1YCR088W KRE9P39005 276 aa5.87□□□□□ -1.47
ABP1YCR088W PMP3P87284 55 aa5.87□□□□□ -1.47
ABP1YCR088W YAL063C-AQ3E791 96 aa5.87□□□□□ -1.47
ABP1YCR088W YHR212W-AP0CX91 67 aa5.86□□□□□ -1.47
ABP1YCR088W YHR130CP38834 111 aa5.86□□□□□ -1.47
ABP1YCR088W YPS5P53057 165 aa5.85□□□□□ -1.47
ABP1YCR088W YOR034C-AQ3E735 80 aa5.85□□□□□ -1.47
ABP1YCR088W MRP10O75012 95 aa5.84□□□□□ -1.47
ABP1YCR088W AIM19P40502 157 aa5.84□□□□□ -1.47
ABP1YCR088W ARC15P40518 154 aaRIP-Chip data5.83□□□□□ -1.48 RIP-Chip
ABP1YCR088W RPP2AP05319 106 aaKnown RBP5.83□□□□□ -1.48
ABP1YCR088W RPL43AP0CX25 92 aaKnown RBP5.83□□□□□ -1.48
ABP1YCR088W RPL43BP0CX26 92 aa5.83□□□□□ -1.48
ABP1YCR088W COX14P39103 70 aa5.83□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms