RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 UGT1A8Q9HAW9 530 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 RXFP1Q9HBX9 757 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 ARFGEF1Q9Y6D6 1849 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 LOC100653049A0A140TA62 436 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 I3L4J1 428 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 KRT34O76011 436 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 PAEPP09466 180 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 NAMPTP43490 491 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 OTOAQ7RTW8 1153 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 TRABD2AQ86V40 505 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 APOL2Q9BQE5 337 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 TRIM55Q9BYV6 548 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 ZMYND8Q9ULU4 1186 aaPredicted RBP14.28□□□□□ -0.12
NDEL1-204ENST00000578172 FAM237BA0A1B0GVD1 139 aa14.27□□□□□ -0.12
NDEL1-204ENST00000578172 MEI4A8MW99 385 aa14.27□□□□□ -0.12
NDEL1-204ENST00000578172 H3BRJ5 948 aa14.27□□□□□ -0.12
NDEL1-204ENST00000578172 PREPLQ4J6C6 727 aaPredicted RBP14.27□□□□□ -0.12
NDEL1-204ENST00000578172 RAB3IPQ96QF0 476 aaPredicted RBP14.27□□□□□ -0.12
NDEL1-204ENST00000578172 GMLQ99445 158 aa14.27□□□□□ -0.12
NDEL1-204ENST00000578172 USP18Q9UMW8 372 aa14.27□□□□□ -0.12
NDEL1-204ENST00000578172 AHDC1Q5TGY3 1603 aaPredicted RBP14.27□□□□□ -0.12
NDEL1-204ENST00000578172 TMEM191CA6NGB0 347 aa14.27□□□□□ -0.13
NDEL1-204ENST00000578172 SPDYE16A6NNV3 312 aaPredicted RBP14.27□□□□□ -0.13
NDEL1-204ENST00000578172 ADM5C9JUS6 153 aa14.27□□□□□ -0.13
NDEL1-204ENST00000578172 E5RJQ4 531 aa14.27□□□□□ -0.13
NDEL1-204ENST00000578172 DNAJC8O75937 253 aaPredicted RBP14.27□□□□□ -0.13
NDEL1-204ENST00000578172 TMEM63AO94886 807 aa14.27□□□□□ -0.13
NDEL1-204ENST00000578172 MMP8P22894 467 aa14.27□□□□□ -0.13
NDEL1-204ENST00000578172 GEMIN4P57678 1058 aaKnown RBP14.27□□□□□ -0.13
NDEL1-204ENST00000578172 TGFB2P61812 414 aa14.27□□□□□ -0.13
NDEL1-204ENST00000578172 C12orf56Q8IXR9 622 aa14.27□□□□□ -0.13
NDEL1-204ENST00000578172 ZCCHC9Q8N567 271 aaKnown RBP14.27□□□□□ -0.13
NDEL1-204ENST00000578172 TSC22D3Q99576 134 aa14.27□□□□□ -0.13
NDEL1-204ENST00000578172 NKX1-2Q9UD57 310 aaPredicted RBP14.27□□□□□ -0.13
NDEL1-204ENST00000578172 CHKBQ9Y259 395 aa14.27□□□□□ -0.13
NDEL1-204ENST00000578172 COQ4Q9Y3A0 265 aa14.27□□□□□ -0.13
NDEL1-204ENST00000578172 MAST2Q6P0Q8 1798 aa14.27□□□□□ -0.13
NDEL1-204ENST00000578172 hCG_1818297A0A087WSY0 165 aa14.27□□□□□ -0.13
NDEL1-204ENST00000578172 ADCY3O60266 1144 aa14.27□□□□□ -0.13
NDEL1-204ENST00000578172 USP12O75317 370 aa14.27□□□□□ -0.13
NDEL1-204ENST00000578172 MYL2P10916 166 aa14.27□□□□□ -0.13
NDEL1-204ENST00000578172 PDE1BQ01064 536 aa14.27□□□□□ -0.13
NDEL1-204ENST00000578172 CYP1B1Q16678 543 aa14.27□□□□□ -0.13
NDEL1-204ENST00000578172 KATNAL2Q8IYT4 538 aa14.27□□□□□ -0.13
NDEL1-204ENST00000578172 UNC5BQ8IZJ1 945 aa14.27□□□□□ -0.13
NDEL1-204ENST00000578172 CLMNQ96JQ2 1002 aa14.27□□□□□ -0.13
NDEL1-204ENST00000578172 ZC3H7BQ9UGR2 993 aaKnown RBP14.27□□□□□ -0.13
NDEL1-204ENST00000578172 GRID1Q9ULK0 1009 aa14.27□□□□□ -0.13
NDEL1-204ENST00000578172 LRCH4O75427 683 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 ACO1P21399 889 aaKnown RBP14.26□□□□□ -0.13
NDEL1-204ENST00000578172 RBL1P28749 1068 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 NME3Q13232 169 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 MTFR1Q15390 333 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 KIZQ2M2Z5 673 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 TRIM72Q6ZMU5 477 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 POU5F2Q8N7G0 328 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 CENPTQ96BT3 561 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 MANSC1Q9H8J5 431 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 MINDY3Q9H8M7 445 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 AVENQ9NQS1 362 aaPredicted RBP14.26□□□□□ -0.13
NDEL1-204ENST00000578172 A0A0B4J269 797 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 CFAP73A6NFT4 308 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 GOLGA8TH3BQL2 631 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 OGTO15294 1046 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 ERBB2P04626 1255 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 NCF2P19878 526 aaPredicted RBP14.26□□□□□ -0.13
NDEL1-204ENST00000578172 PLCB4Q15147 1175 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 JADE1Q6IE81 842 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 RFWD3Q6PCD5 774 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 POLNQ7Z5Q5 900 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 TBC1D10AQ9BXI6 508 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 TRIM4Q9C037 500 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 CLEC11AQ9Y240 323 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 SBF2Q86WG5 1849 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 hCG_2014768A0A024R1R8 64 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 PLSCR1O15162 318 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 HMGCRP04035 888 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 ZNF252P-AS1Q0IIN9 211 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 PIGHQ14442 188 aaPredicted RBP14.26□□□□□ -0.13
NDEL1-204ENST00000578172 ALLCQ8N6M5 410 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 CLPTM1LQ96KA5 538 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 VPS11Q9H270 941 aa14.26□□□□□ -0.13
NDEL1-204ENST00000578172 COL5A3P25940 1745 aaPredicted RBP14.25□□□□□ -0.13
NDEL1-204ENST00000578172 LACTBL1A8MY62 500 aa14.25□□□□□ -0.13
NDEL1-204ENST00000578172 CYP1A1P04798 512 aaPredicted RBP14.25□□□□□ -0.13
NDEL1-204ENST00000578172 ALYREFQ86V81 257 aaKnown RBP14.25□□□□□ -0.13
NDEL1-204ENST00000578172 FAM131BQ86XD5 332 aa14.25□□□□□ -0.13
NDEL1-204ENST00000578172 IGDCC3Q8IVU1 814 aa14.25□□□□□ -0.13
NDEL1-204ENST00000578172 ADAM32Q8TC27 787 aa14.25□□□□□ -0.13
NDEL1-204ENST00000578172 DEPDC1BQ8WUY9 529 aa14.25□□□□□ -0.13
NDEL1-204ENST00000578172 CPT1BQ92523 772 aa14.25□□□□□ -0.13
NDEL1-204ENST00000578172 USP6NLQ92738 828 aa14.25□□□□□ -0.13
NDEL1-204ENST00000578172 HPDLQ96IR7 371 aa14.25□□□□□ -0.13
NDEL1-204ENST00000578172 ARIH2O95376 493 aa14.25□□□□□ -0.13
NDEL1-204ENST00000578172 KRT7P08729 469 aa14.25□□□□□ -0.13
NDEL1-204ENST00000578172 NDST1P52848 882 aa14.25□□□□□ -0.13
NDEL1-204ENST00000578172 CHI3L2Q15782 390 aa14.25□□□□□ -0.13
NDEL1-204ENST00000578172 PLEKHA7Q6IQ23 1121 aa14.25□□□□□ -0.13
NDEL1-204ENST00000578172 PPIL6Q8IXY8 311 aa14.25□□□□□ -0.13
NDEL1-204ENST00000578172 KIAA0319LQ8IZA0 1049 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms