RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 CCINQ13939 588 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 LRRC32Q14392 662 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 KCNB1Q14721 858 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 MTF1Q14872 753 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 ZNF77Q15935 545 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 ZACNQ401N2 412 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 C1orf220Q5T0J3 134 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 CC2D1AQ6P1N0 951 aaPredicted RBP9.61□□□□□ -0.87
USF1-204ENST00000472217 MAMSTRQ6ZN01 415 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 Q6ZS52 159 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 SV2AQ7L0J3 742 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 GUF1Q8N442 669 aaKnown RBP9.61□□□□□ -0.87
USF1-204ENST00000472217 ARL14EPQ8N8R7 260 aaPredicted RBP9.61□□□□□ -0.87
USF1-204ENST00000472217 TTC16Q8NEE8 873 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 B3GNT5Q9BYG0 378 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 ELOVL4Q9GZR5 314 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 EBF3Q9H4W6 596 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 ZSCAN32Q9NX65 697 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 FRMD4BQ9Y2L6 1034 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 ZNF638Q14966 1978 aaKnown RBP9.61□□□□□ -0.87
USF1-204ENST00000472217 CACNA1IQ9P0X4 2223 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 USP34Q70CQ2 3546 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 IKBKBO14920 756 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 LILRB5O75023 590 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 ASS1P00966 412 aaKnown RBP9.6□□□□□ -0.87
USF1-204ENST00000472217 TRIM49P0CI25 452 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 TRIM49CP0CI26 452 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 CXCL12P48061 93 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 CCR3P51677 355 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 VAMP7P51809 220 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 PNOCQ13519 176 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 BECN1Q14457 450 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 PPP2R5DQ14738 602 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 PDGFRLQ15198 375 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 NFIL3Q16649 462 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 SGSM1Q2NKQ1 1148 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 ZCWPW2Q504Y3 356 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 DGKKQ5KSL6 1271 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 SPOPLQ6IQ16 392 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 FAM35AQ86V20 835 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 FMR1NBQ8N0W7 255 aaPredicted RBP9.6□□□□□ -0.87
USF1-204ENST00000472217 SPEM1Q8N4L4 309 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 SH3RF2Q8TEC5 729 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 ATRIPQ8WXE1 791 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 TAF4BQ92750 862 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 TNIP3Q96KP6 325 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 FAM126AQ9BYI3 521 aaPredicted RBP9.6□□□□□ -0.87
USF1-204ENST00000472217 EHD2Q9NZN4 543 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 TRPM5Q9NZQ8 1165 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 HMGXB4Q9UGU5 601 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 WNT6Q9Y6F9 365 aa9.6□□□□□ -0.87
USF1-204ENST00000472217 ATP8B3O60423 1300 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 MYO15AQ9UKN7 3530 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 ZNF840PA6NDX5 716 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 HLA-DRAP01903 254 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 P4HA1P13674 534 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 TCF3P15923 654 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 HDCP19113 662 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 ASPAP45381 313 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 GCLMP48507 274 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 PDE6CP51160 858 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 ZXDBP98169 803 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 PPP3CAQ08209 521 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 IFRD2Q12894 506 aaPredicted RBP9.59□□□□□ -0.87
USF1-204ENST00000472217 TAF10Q12962 218 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 ORC1Q13415 861 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 TMEM196Q5HYL7 178 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 NAIF1Q69YI7 327 aaPredicted RBP9.59□□□□□ -0.87
USF1-204ENST00000472217 FSTL4Q6MZW2 842 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 PAQR9Q6ZVX9 377 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 INTS8Q75QN2 995 aaKnown RBP9.59□□□□□ -0.87
USF1-204ENST00000472217 ACOT1Q86TX2 421 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 FAM186BQ8IYM0 893 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 SMYD4Q8IYR2 804 aaPredicted RBP9.59□□□□□ -0.87
USF1-204ENST00000472217 FUKQ8N0W3 1084 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 SYNPOQ8N3V7 929 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 CPA6Q8N4T0 437 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 TAS1R2Q8TE23 839 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 OSCP1Q8WVF1 389 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 RUBCNQ92622 972 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 ATP2A3Q93084 1043 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 KCNK16Q96T55 309 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 HINFPQ9BQA5 517 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 MED10Q9BTT4 135 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 EPC1Q9H2F5 836 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.59□□□□□ -0.87
USF1-204ENST00000472217 KRT82Q9NSB4 513 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 C2orf42Q9NWW7 574 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 DUS2Q9NX74 493 aaKnown RBP9.59□□□□□ -0.87
USF1-204ENST00000472217 ARHGAP26Q9UNA1 814 aa9.59□□□□□ -0.87
USF1-204ENST00000472217 SMG5Q9UPR3 1016 aaKnown RBP9.59□□□□□ -0.87
USF1-204ENST00000472217 GOLGA6L4A6NEF3 574 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 K7ESF4 209 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 TRDMT1O14717 391 aaKnown RBP9.58□□□□□ -0.88
USF1-204ENST00000472217 PAPSS2O95340 614 aaPredicted RBP9.58□□□□□ -0.88
USF1-204ENST00000472217 OLFM2O95897 454 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 ABL1P00519 1130 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 OAS1P00973 400 aaKnown RBP9.58□□□□□ -0.88
USF1-204ENST00000472217 KRT13P13646 458 aa9.58□□□□□ -0.88
USF1-204ENST00000472217 CCDC130P13994 396 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms