RNA–Protein interactions for RNA: YPL018W

CTF19, Transcript of Outer kinetochore protein, needed for accurate chromosome segregation, yeast

Gene CTF19, Length 1,110 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTF19	YPL018W	FZF1	P32805	299 aa		4.93	□□□□□ -1.62
CTF19	YPL018W	SDH4	P37298	181 aa		4.93	□□□□□ -1.62
CTF19	YPL018W	YFR045W	P43617	309 aa		4.93	□□□□□ -1.62
CTF19	YPL018W	MIC26	P50087	233 aa		4.93	□□□□□ -1.62
CTF19	YPL018W	YGR017W	P53210	297 aa		4.93	□□□□□ -1.62
CTF19	YPL018W	HHO1	P53551	258 aa		4.93	□□□□□ -1.62
CTF19	YPL018W	YDR274C	P87283	123 aa		4.93	□□□□□ -1.62
CTF19	YPL018W	SAE3	P89114	91 aa		4.93	□□□□□ -1.62
CTF19	YPL018W	YOP1	Q12402	180 aa		4.93	□□□□□ -1.62
CTF19	YPL018W	SLO1	Q3E784	85 aa		4.93	□□□□□ -1.62
CTF19	YPL018W	MDM10	P18409	493 aa		4.92	□□□□□ -1.62
CTF19	YPL018W	SDH8	P38345	138 aa		4.92	□□□□□ -1.62
CTF19	YPL018W	GET2	P40056	285 aa		4.92	□□□□□ -1.62
CTF19	YPL018W	YMR244W	Q04018	355 aa		4.92	□□□□□ -1.62
CTF19	YPL018W	YLR050C	Q12155	161 aa	Known RBP	4.92	□□□□□ -1.62
CTF19	YPL018W	YIR021W-A	Q3E739	70 aa		4.92	□□□□□ -1.62
CTF19	YPL018W	YNR034W-A	Q3E841	98 aa		4.92	□□□□□ -1.62
CTF19	YPL018W	TIR1	P10863	254 aa		4.91	□□□□□ -1.62
CTF19	YPL018W	UIP3	P39547	235 aa		4.91	□□□□□ -1.62
CTF19	YPL018W	MIG3	P39943	394 aa		4.91	□□□□□ -1.62
CTF19	YPL018W	GTT1	P40582	234 aa		4.91	□□□□□ -1.62
CTF19	YPL018W	VPS71	Q03433	280 aa		4.91	□□□□□ -1.62
CTF19	YPL018W	YPR063C	Q12160	140 aa		4.91	□□□□□ -1.62
CTF19	YPL018W	YLR342W-A	Q3E810	57 aa		4.91	□□□□□ -1.62
CTF19	YPL018W	YBR013C	P38215	129 aa		4.9	□□□□□ -1.63
CTF19	YPL018W	YHR022C	P38763	256 aa		4.9	□□□□□ -1.63
CTF19	YPL018W	IRC22	P40006	225 aa		4.9	□□□□□ -1.63
CTF19	YPL018W	YER076C	P40049	302 aa		4.9	□□□□□ -1.63
CTF19	YPL018W	PAU5	P43575	122 aa		4.9	□□□□□ -1.63
CTF19	YPL018W	MRPS8	Q03799	155 aa		4.9	□□□□□ -1.63
CTF19	YPL018W	UPS3	Q04006	179 aa		4.9	□□□□□ -1.63
CTF19	YPL018W	ARC18	Q05933	178 aa	Known RBP	4.9	□□□□□ -1.63
CTF19	YPL018W	MHR1	Q06630	226 aa		4.9	□□□□□ -1.63
CTF19	YPL018W	CCW12	Q12127	133 aa		4.9	□□□□□ -1.63
CTF19	YPL018W	UTP23	Q12339	254 aa	Known RBP	4.9	□□□□□ -1.63
CTF19	YPL018W	YOL085C	Q99345	113 aa		4.9	□□□□□ -1.63
CTF19	YPL018W	MRPL31	P14063	131 aa	Predicted RBP	4.89	□□□□□ -1.63
CTF19	YPL018W	PAM17	P36147	197 aa		4.89	□□□□□ -1.63
CTF19	YPL018W	RPB11	P38902	120 aa		4.89	□□□□□ -1.63
CTF19	YPL018W	PKR1	Q03880	122 aa	Known RBP	4.89	□□□□□ -1.63
CTF19	YPL018W	RPL12A	P0CX53	165 aa	Known RBP	4.88	□□□□□ -1.63
CTF19	YPL018W	RPL12B	P0CX54	165 aa		4.88	□□□□□ -1.63
CTF19	YPL018W	HMRA1	P0CY11	126 aa		4.88	□□□□□ -1.63
CTF19	YPL018W	MIX23	P38162	196 aa		4.88	□□□□□ -1.63
CTF19	YPL018W	KEG1	P43614	200 aa		4.88	□□□□□ -1.63
CTF19	YPL018W	UBC11	P52492	156 aa		4.88	□□□□□ -1.63
CTF19	YPL018W	YGR026W	P53217	278 aa		4.88	□□□□□ -1.63
CTF19	YPL018W	YLR281C	Q05863	155 aa		4.88	□□□□□ -1.63
CTF19	YPL018W	TIM22	Q12328	207 aa		4.88	□□□□□ -1.63
CTF19	YPL018W	PAU19	P0CE85	124 aa		4.87	□□□□□ -1.63
CTF19	YPL018W	PAU21	P0CE86	164 aa		4.87	□□□□□ -1.63
CTF19	YPL018W	PAU22	P0CE87	164 aa		4.87	□□□□□ -1.63
CTF19	YPL018W	PAU3	P25610	124 aa		4.87	□□□□□ -1.63
CTF19	YPL018W	RPL32	P38061	130 aa	Known RBP	4.87	□□□□□ -1.63
CTF19	YPL018W	SPI1	P40092	148 aa		4.87	□□□□□ -1.63
CTF19	YPL018W	THG1	P53215	237 aa	Known RBP	4.87	□□□□□ -1.63
CTF19	YPL018W	YER175W-A	Q8TGU4	54 aa		4.87	□□□□□ -1.63
CTF19	YPL018W	Q0255	P03881	472 aa		4.86	□□□□□ -1.63
CTF19	YPL018W	MRPL24	P36525	258 aa	Predicted RBP	4.86	□□□□□ -1.63
CTF19	YPL018W	COX12	Q01519	83 aa		4.86	□□□□□ -1.63
CTF19	YPL018W	RPL2A	P0CX45	254 aa	Known RBP	4.85	□□□□□ -1.63
CTF19	YPL018W	RPL2B	P0CX46	254 aa	Known RBP	4.85	□□□□□ -1.63
CTF19	YPL018W	RPS11A	P0CX47	156 aa	Known RBP	4.85	□□□□□ -1.63
CTF19	YPL018W	RPS11B	P0CX48	156 aa	Known RBP	4.85	□□□□□ -1.63
CTF19	YPL018W	YCR023C	P25351	611 aa		4.85	□□□□□ -1.63
CTF19	YPL018W	UGX2	P32772	223 aa		4.85	□□□□□ -1.63
CTF19	YPL018W	PAU7	P39545	55 aa		4.85	□□□□□ -1.63
CTF19	YPL018W	LSM8	P47093	109 aa	Known RBP	4.85	□□□□□ -1.63
CTF19	YPL018W	SDS23	P53172	527 aa		4.85	□□□□□ -1.63
CTF19	YPL018W	VAR1	P02381	398 aa		4.84	□□□□□ -1.63
CTF19	YPL018W	AGA1	P32323	725 aa		4.84	□□□□□ -1.63
CTF19	YPL018W	YKR041W	P36134	250 aa		4.84	□□□□□ -1.63
CTF19	YPL018W	YHR140W	P38842	239 aa		4.84	□□□□□ -1.63
CTF19	YPL018W	POR1	P04840	283 aa	Known RBP	4.83	□□□□□ -1.64
CTF19	YPL018W	ZRT1	P32804	376 aa		4.83	□□□□□ -1.64
CTF19	YPL018W	NRG2	P38082	220 aa		4.83	□□□□□ -1.64
CTF19	YPL018W	YIA6	P40556	373 aa		4.83	□□□□□ -1.64
CTF19	YPL018W	GLC8	P41818	229 aa		4.83	□□□□□ -1.64
CTF19	YPL018W	YCH1	P42937	148 aa		4.83	□□□□□ -1.64
CTF19	YPL018W	YFR035C	P43608	114 aa		4.83	□□□□□ -1.64
CTF19	YPL018W	GPI19	Q04082	140 aa		4.83	□□□□□ -1.64
CTF19	YPL018W	RPL23A	P0CX41	137 aa	Known RBP	4.82	□□□□□ -1.64
CTF19	YPL018W	RPL23B	P0CX42	137 aa	Known RBP	4.82	□□□□□ -1.64
CTF19	YPL018W	YDR366C	P87287	132 aa		4.82	□□□□□ -1.64
CTF19	YPL018W	YBR200W-A	Q3E755	54 aa		4.82	□□□□□ -1.64
CTF19	YPL018W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.82	□□□□□ -1.64
CTF19	YPL018W	DYN1	P36022	4092 aa		4.82	□□□□□ -1.64
CTF19	YPL018W	SAL1	D6W196	494 aa		4.81	□□□□□ -1.64
CTF19	YPL018W	YCR001W	P25347	104 aa		4.81	□□□□□ -1.64
CTF19	YPL018W	RPL16B	P26785	198 aa	Known RBP	4.81	□□□□□ -1.64
CTF19	YPL018W	FSF1	Q12029	327 aa	Known RBP	4.81	□□□□□ -1.64
CTF19	YPL018W	YCR024C-B	Q3E7Z8	88 aa		4.81	□□□□□ -1.64
CTF19	YPL018W	YCR075W-A	Q3E830	75 aa		4.81	□□□□□ -1.64
CTF19	YPL018W	YLR415C	O13578	112 aa		4.8	□□□□□ -1.64
CTF19	YPL018W	SEC4	P07560	215 aa	Known RBP	4.8	□□□□□ -1.64
CTF19	YPL018W	OST3	P48439	350 aa		4.8	□□□□□ -1.64
CTF19	YPL018W	CYT2	Q00873	224 aa		4.8	□□□□□ -1.64
CTF19	YPL018W	TVP18	Q04767	167 aa		4.8	□□□□□ -1.64
CTF19	YPL018W	MRP49	P32388	137 aa		4.79	□□□□□ -1.64
CTF19	YPL018W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms