RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W SEC4P07560 215 aaKnown RBP6.4□□□□□ -1.38
AMF1YOR378W YDR366CP87287 132 aa6.4□□□□□ -1.38
AMF1YOR378W FSF1Q12029 327 aaKnown RBP6.4□□□□□ -1.38
AMF1YOR378W YLR122CQ12312 125 aa6.4□□□□□ -1.38
AMF1YOR378W WIP1Q2V2P8 89 aa6.4□□□□□ -1.38
AMF1YOR378W YBR200W-AQ3E755 54 aa6.4□□□□□ -1.38
AMF1YOR378W FRS1P15624 595 aaKnown RBP6.4□□□□□ -1.39
AMF1YOR378W MLF3P32047 452 aa6.4□□□□□ -1.39
AMF1YOR378W YFR035CP43608 114 aa6.4□□□□□ -1.39
AMF1YOR378W COX12Q01519 83 aa6.4□□□□□ -1.39
AMF1YOR378W CYC7P00045 113 aa6.39□□□□□ -1.39
AMF1YOR378W SSS1P35179 80 aa6.39□□□□□ -1.39
AMF1YOR378W ELF1P36053 145 aa6.39□□□□□ -1.39
AMF1YOR378W BRP1P53194 125 aa6.39□□□□□ -1.39
AMF1YOR378W MED7Q08278 222 aa6.39□□□□□ -1.39
AMF1YOR378W RPL16BP26785 198 aaKnown RBP6.38□□□□□ -1.39
AMF1YOR378W DUO1P53168 247 aaKnown RBP6.38□□□□□ -1.39
AMF1YOR378W CUE4Q04201 117 aaPredicted RBP6.38□□□□□ -1.39
AMF1YOR378W YPR053CQ6Q5F3 151 aa6.38□□□□□ -1.39
AMF1YOR378W SEC72P39742 193 aaKnown RBP6.37□□□□□ -1.39
AMF1YOR378W YGL118CP53132 145 aa6.37□□□□□ -1.39
AMF1YOR378W TVP18Q04767 167 aa6.37□□□□□ -1.39
AMF1YOR378W VHS2P40463 436 aa6.36□□□□□ -1.39
AMF1YOR378W YCH1P42937 148 aa6.36□□□□□ -1.39
AMF1YOR378W AIM34Q03673 198 aa6.36□□□□□ -1.39
AMF1YOR378W RRT13P40042 185 aa6.35□□□□□ -1.39
AMF1YOR378W YKR032WP36127 104 aa6.35□□□□□ -1.39
AMF1YOR378W YCR075W-AQ3E830 75 aa6.34□□□□□ -1.39
AMF1YOR378W YBR126W-AQ8TGU7 68 aa6.34□□□□□ -1.39
AMF1YOR378W RPL42AP0CX27 106 aaKnown RBP6.33□□□□□ -1.4
AMF1YOR378W RPL42BP0CX28 106 aaKnown RBP6.33□□□□□ -1.4
AMF1YOR378W KTI12P34253 313 aaKnown RBP6.33□□□□□ -1.4
AMF1YOR378W NRG2P38082 220 aa6.33□□□□□ -1.4
AMF1YOR378W PET8P38921 284 aa6.33□□□□□ -1.4
AMF1YOR378W OST3P48439 350 aa6.33□□□□□ -1.4
AMF1YOR378W GSP1P32835 219 aaKnown RBP6.32□□□□□ -1.4
AMF1YOR378W GSP2P32836 220 aaKnown RBP6.32□□□□□ -1.4
AMF1YOR378W TEM1P38987 245 aa6.32□□□□□ -1.4
AMF1YOR378W YER134CP40081 178 aa6.32□□□□□ -1.4
AMF1YOR378W YNL200CP40165 246 aaKnown RBP6.31□□□□□ -1.4
AMF1YOR378W YPS5P53057 165 aa6.31□□□□□ -1.4
AMF1YOR378W SEN15Q04675 128 aa6.31□□□□□ -1.4
AMF1YOR378W YLR042CQ07990 161 aa6.31□□□□□ -1.4
AMF1YOR378W COA6Q3E846 104 aa6.31□□□□□ -1.4
AMF1YOR378W SAL1D6W196 494 aa6.3□□□□□ -1.4
AMF1YOR378W YCR001WP25347 104 aa6.3□□□□□ -1.4
AMF1YOR378W YIL014C-AQ02598 104 aa6.3□□□□□ -1.4
AMF1YOR378W VAM10Q08474 114 aa6.3□□□□□ -1.4
AMF1YOR378W MRPL11P36521 249 aaPredicted RBP6.3□□□□□ -1.4
AMF1YOR378W YER076CP40049 302 aa6.3□□□□□ -1.4
AMF1YOR378W ERV14P53173 138 aa6.3□□□□□ -1.4
AMF1YOR378W ATP23P53722 227 aa6.3□□□□□ -1.4
AMF1YOR378W MGR2Q02889 113 aa6.3□□□□□ -1.4
AMF1YOR378W ERG27Q12452 347 aaKnown RBP6.3□□□□□ -1.4
AMF1YOR378W PFY1P07274 126 aa6.29□□□□□ -1.4
AMF1YOR378W SCM4P32564 187 aa6.29□□□□□ -1.4
AMF1YOR378W YIL134C-AQ45U18 67 aa6.29□□□□□ -1.4
AMF1YOR378W YPR014CQ6B0W2 109 aa6.29□□□□□ -1.4
AMF1YOR378W HTL1Q9URQ5 78 aa6.29□□□□□ -1.4
AMF1YOR378W YCR023CP25351 611 aa6.28□□□□□ -1.4
AMF1YOR378W CDC40P40968 455 aaPredicted RBP6.28□□□□□ -1.4
AMF1YOR378W SGF11Q03067 99 aa6.28□□□□□ -1.4
AMF1YOR378W RDS3Q06835 107 aaPredicted RBP6.28□□□□□ -1.4
AMF1YOR378W AUA1P32450 94 aa6.27□□□□□ -1.41
AMF1YOR378W YNL217WP40152 326 aa6.27□□□□□ -1.41
AMF1YOR378W DCV1P43595 202 aa6.27□□□□□ -1.41
AMF1YOR378W GLO1P50107 326 aa6.27□□□□□ -1.41
AMF1YOR378W SCW10Q04951 389 aa6.27□□□□□ -1.41
AMF1YOR378W MHR1Q06630 226 aa6.27□□□□□ -1.41
AMF1YOR378W YGR240C-AQ3E786 66 aa6.27□□□□□ -1.41
AMF1YOR378W YKR070WP36151 352 aaKnown RBP6.26□□□□□ -1.41
AMF1YOR378W YJL028WP47062 111 aa6.26□□□□□ -1.41
AMF1YOR378W DGA1Q08650 418 aa6.26□□□□□ -1.41
AMF1YOR378W AQY1P0CD91 305 aa6.25□□□□□ -1.41
AMF1YOR378W PAU16P35994 123 aa6.25□□□□□ -1.41
AMF1YOR378W KRE9P39005 276 aa6.25□□□□□ -1.41
AMF1YOR378W TOS6P48560 102 aa6.25□□□□□ -1.41
AMF1YOR378W POP3P53833 195 aaPredicted RBP6.25□□□□□ -1.41
AMF1YOR378W FCF1Q05498 189 aaPredicted RBP6.25□□□□□ -1.41
AMF1YOR378W PRE1P22141 198 aaKnown RBP6.25□□□□□ -1.41
AMF1YOR378W PCL2P25693 308 aa6.25□□□□□ -1.41
AMF1YOR378W YRA2P36036 203 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
AMF1YOR378W YDR042CQ03205 200 aa6.25□□□□□ -1.41
AMF1YOR378W CNL1Q06333 122 aa6.25□□□□□ -1.41
AMF1YOR378W PMP3P87284 55 aa6.24□□□□□ -1.41
AMF1YOR378W DPP1Q05521 289 aa6.24□□□□□ -1.41
AMF1YOR378W MRPL44P19956 98 aa6.23□□□□□ -1.41
AMF1YOR378W HAL1Q01766 294 aa6.23□□□□□ -1.41
AMF1YOR378W RPL27BP0C2H7 136 aaKnown RBP6.22□□□□□ -1.41
AMF1YOR378W YOR008C-AQ3E7B9 74 aa6.22□□□□□ -1.41
AMF1YOR378W RPS8AP0CX39 200 aaKnown RBP6.21□□□□□ -1.42
AMF1YOR378W RPS8BP0CX40 200 aaKnown RBP6.21□□□□□ -1.42
AMF1YOR378W UBC5P15732 148 aa6.21□□□□□ -1.42
AMF1YOR378W YPT53P36019 220 aa6.21□□□□□ -1.42
AMF1YOR378W URM1P40554 99 aaPredicted RBP6.2□□□□□ -1.42
AMF1YOR378W CRC1Q12289 327 aa6.2□□□□□ -1.42
AMF1YOR378W HMRA2P0CY13 119 aa6.2□□□□□ -1.42
AMF1YOR378W PKR1Q03880 122 aaKnown RBP6.2□□□□□ -1.42
AMF1YOR378W YLR050CQ12155 161 aaKnown RBP6.2□□□□□ -1.42
AMF1YOR378W TPT1Q12272 230 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 58.5 ms