RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W YGL118CP53132 145 aa4.53□□□□□ -1.68
ATG4YNL223W ERV14P53173 138 aa4.53□□□□□ -1.68
ATG4YNL223W DIA1P54005 336 aa4.53□□□□□ -1.68
ATG4YNL223W YMR244WQ04018 355 aa4.53□□□□□ -1.68
ATG4YNL223W VAR1P02381 398 aa4.52□□□□□ -1.69
ATG4YNL223W YKL102CP34249 101 aa4.52□□□□□ -1.69
ATG4YNL223W YKR032WP36127 104 aa4.52□□□□□ -1.69
ATG4YNL223W PET8P38921 284 aa4.52□□□□□ -1.69
ATG4YNL223W SEC72P39742 193 aaKnown RBP4.52□□□□□ -1.69
ATG4YNL223W MIG3P39943 394 aa4.52□□□□□ -1.69
ATG4YNL223W AGE2P40529 298 aa4.52□□□□□ -1.69
ATG4YNL223W YJL028WP47062 111 aa4.52□□□□□ -1.69
ATG4YNL223W MIC26P50087 233 aa4.52□□□□□ -1.69
ATG4YNL223W YGR035W-AQ45U48 73 aa4.52□□□□□ -1.69
ATG4YNL223W YBR144CP34215 104 aa4.51□□□□□ -1.69
ATG4YNL223W MPC2P38857 129 aa4.51□□□□□ -1.69
ATG4YNL223W MRPS8Q03799 155 aa4.51□□□□□ -1.69
ATG4YNL223W PAU16P35994 123 aa4.5□□□□□ -1.69
ATG4YNL223W ECM33P38248 429 aaKnown RBP4.5□□□□□ -1.69
ATG4YNL223W ALG13P53178 202 aa4.5□□□□□ -1.69
ATG4YNL223W MOT3P54785 490 aaKnown RBP4.5□□□□□ -1.69
ATG4YNL223W KEG1P43614 200 aa4.49□□□□□ -1.69
ATG4YNL223W DUO1P53168 247 aaKnown RBP4.49□□□□□ -1.69
ATG4YNL223W YIL014C-AQ02598 104 aa4.49□□□□□ -1.69
ATG4YNL223W YBR200W-AQ3E755 54 aa4.49□□□□□ -1.69
ATG4YNL223W FUN14P18411 198 aa4.49□□□□□ -1.69
ATG4YNL223W SCM4P32564 187 aa4.49□□□□□ -1.69
ATG4YNL223W YFR035CP43608 114 aa4.49□□□□□ -1.69
ATG4YNL223W POP3P53833 195 aaPredicted RBP4.48□□□□□ -1.69
ATG4YNL223W YDR366CP87287 132 aa4.48□□□□□ -1.69
ATG4YNL223W MGR2Q02889 113 aa4.48□□□□□ -1.69
ATG4YNL223W CNL1Q06333 122 aa4.48□□□□□ -1.69
ATG4YNL223W TPT1Q12272 230 aaKnown RBP4.48□□□□□ -1.69
ATG4YNL223W YPR014CQ6B0W2 109 aa4.48□□□□□ -1.69
ATG4YNL223W Q0255P03881 472 aa4.47□□□□□ -1.69
ATG4YNL223W MRPL44P19956 98 aa4.47□□□□□ -1.69
ATG4YNL223W RPL16BP26785 198 aaKnown RBP4.47□□□□□ -1.69
ATG4YNL223W KTI12P34253 313 aaKnown RBP4.47□□□□□ -1.69
ATG4YNL223W ELF1P36053 145 aa4.47□□□□□ -1.69
ATG4YNL223W YER076CP40049 302 aa4.47□□□□□ -1.69
ATG4YNL223W YDR274CP87283 123 aa4.47□□□□□ -1.69
ATG4YNL223W TVP18Q04767 167 aa4.47□□□□□ -1.69
ATG4YNL223W SAL1D6W196 494 aa4.46□□□□□ -1.7
ATG4YNL223W PFY1P07274 126 aa4.46□□□□□ -1.7
ATG4YNL223W DPP1Q05521 289 aa4.46□□□□□ -1.7
ATG4YNL223W HTL1Q9URQ5 78 aa4.46□□□□□ -1.7
ATG4YNL223W AQY1P0CD91 305 aa4.45□□□□□ -1.7
ATG4YNL223W RPL42AP0CX27 106 aaKnown RBP4.45□□□□□ -1.7
ATG4YNL223W RPL42BP0CX28 106 aaKnown RBP4.45□□□□□ -1.7
ATG4YNL223W RPL2AP0CX45 254 aaKnown RBP4.45□□□□□ -1.7
ATG4YNL223W RPL2BP0CX46 254 aaKnown RBP4.45□□□□□ -1.7
ATG4YNL223W RPS11AP0CX47 156 aaKnown RBP4.45□□□□□ -1.7
ATG4YNL223W RPS11BP0CX48 156 aaKnown RBP4.45□□□□□ -1.7
ATG4YNL223W PRE1P22141 198 aaKnown RBP4.45□□□□□ -1.7
ATG4YNL223W YCR023CP25351 611 aa4.45□□□□□ -1.7
ATG4YNL223W RRT13P40042 185 aa4.45□□□□□ -1.7
ATG4YNL223W ATP23P53722 227 aa4.45□□□□□ -1.7
ATG4YNL223W YDR042CQ03205 200 aa4.45□□□□□ -1.7
ATG4YNL223W AIM34Q03673 198 aa4.45□□□□□ -1.7
ATG4YNL223W GRH1Q04410 372 aaKnown RBP4.45□□□□□ -1.7
ATG4YNL223W FCF1Q05498 189 aaPredicted RBP4.45□□□□□ -1.7
ATG4YNL223W FYV7Q12247 151 aa4.45□□□□□ -1.7
ATG4YNL223W MIG1P27705 504 aa4.44□□□□□ -1.7
ATG4YNL223W VHS2P40463 436 aa4.44□□□□□ -1.7
ATG4YNL223W HAC1P41546 238 aa4.44□□□□□ -1.7
ATG4YNL223W MSC3Q05812 728 aa4.44□□□□□ -1.7
ATG4YNL223W LSO2Q3E772 92 aaKnown RBP4.44□□□□□ -1.7
ATG4YNL223W SEC11P15367 167 aa4.43□□□□□ -1.7
ATG4YNL223W TOS6P48560 102 aa4.43□□□□□ -1.7
ATG4YNL223W PKR1Q03880 122 aaKnown RBP4.43□□□□□ -1.7
ATG4YNL223W YLR042CQ07990 161 aa4.43□□□□□ -1.7
ATG4YNL223W NAT5Q08689 176 aa4.43□□□□□ -1.7
ATG4YNL223W YDL157CQ12082 118 aa4.43□□□□□ -1.7
ATG4YNL223W YLR050CQ12155 161 aaKnown RBP4.43□□□□□ -1.7
ATG4YNL223W RPL27BP0C2H7 136 aaKnown RBP4.43□□□□□ -1.7
ATG4YNL223W PCL2P25693 308 aa4.43□□□□□ -1.7
ATG4YNL223W FYV4P38783 130 aaPredicted RBP4.43□□□□□ -1.7
ATG4YNL223W YCH1P42937 148 aa4.43□□□□□ -1.7
ATG4YNL223W GLO1P50107 326 aa4.43□□□□□ -1.7
ATG4YNL223W YGL230CP53074 147 aa4.43□□□□□ -1.7
ATG4YNL223W SCS22Q6Q595 175 aa4.43□□□□□ -1.7
ATG4YNL223W CYC7P00045 113 aa4.42□□□□□ -1.7
ATG4YNL223W ATP5P09457 212 aa4.42□□□□□ -1.7
ATG4YNL223W YKR070WP36151 352 aaKnown RBP4.42□□□□□ -1.7
ATG4YNL223W DCV1P43595 202 aa4.42□□□□□ -1.7
ATG4YNL223W YLR112WQ12130 139 aa4.42□□□□□ -1.7
ATG4YNL223W YDL085C-AQ3E7B7 68 aaKnown RBP4.42□□□□□ -1.7
ATG4YNL223W APS1P35181 156 aa4.41□□□□□ -1.7
ATG4YNL223W COX12Q01519 83 aa4.41□□□□□ -1.7
ATG4YNL223W VPS71Q03433 280 aa4.41□□□□□ -1.7
ATG4YNL223W YMR103CQ04436 120 aa4.41□□□□□ -1.7
ATG4YNL223W HMRA2P0CY13 119 aa4.4□□□□□ -1.71
ATG4YNL223W YCR007CP25354 239 aa4.4□□□□□ -1.71
ATG4YNL223W MSL1P40567 111 aaPredicted RBP4.4□□□□□ -1.71
ATG4YNL223W SAE3P89114 91 aa4.4□□□□□ -1.71
ATG4YNL223W YLR122CQ12312 125 aa4.4□□□□□ -1.71
ATG4YNL223W DYN1P36022 4092 aa4.39□□□□□ -1.71
ATG4YNL223W YPS5P53057 165 aa4.39□□□□□ -1.71
ATG4YNL223W BET5Q03630 159 aa4.39□□□□□ -1.71
ATG4YNL223W DGA1Q08650 418 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms