RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W ERV14P53173 138 aa0.82□□□□□ -2.28
CTK3YML112W YDR042CQ03205 200 aa0.82□□□□□ -2.28
CTK3YML112W GPI19Q04082 140 aa0.82□□□□□ -2.28
CTK3YML112W MIX14Q04341 121 aa0.82□□□□□ -2.28
CTK3YML112W ELP6Q04868 273 aa0.82□□□□□ -2.28
CTK3YML112W YPR153WQ06537 140 aa0.82□□□□□ -2.28
CTK3YML112W ATG40Q99325 256 aa0.82□□□□□ -2.28
CTK3YML112W RPA190P10964 1664 aaKnown RBP0.81□□□□□ -2.28
CTK3YML112W NUP159P40477 1460 aa0.81□□□□□ -2.28
CTK3YML112W DNA2P38859 1522 aa0.81□□□□□ -2.28
CTK3YML112W SWR1Q05471 1514 aa0.81□□□□□ -2.28
CTK3YML112W ECM12O13529 151 aa0.81□□□□□ -2.28
CTK3YML112W COX8P04039 78 aa0.81□□□□□ -2.28
CTK3YML112W YJL197C-AP0C5P0 93 aa0.81□□□□□ -2.28
CTK3YML112W PAU21P0CE86 164 aa0.81□□□□□ -2.28
CTK3YML112W PAU22P0CE87 164 aa0.81□□□□□ -2.28
CTK3YML112W FUN14P18411 198 aa0.81□□□□□ -2.28
CTK3YML112W EMC5P40540 141 aa0.81□□□□□ -2.28
CTK3YML112W HYR1P40581 163 aaKnown RBP0.81□□□□□ -2.28
CTK3YML112W YFL051CP43552 160 aa0.81□□□□□ -2.28
CTK3YML112W HUR1P45820 110 aa0.81□□□□□ -2.28
CTK3YML112W RSM19P53733 91 aaPredicted RBP0.81□□□□□ -2.28
CTK3YML112W YLR296WQ05898 108 aa0.81□□□□□ -2.28
CTK3YML112W RAF1Q06891 181 aa0.81□□□□□ -2.28
CTK3YML112W YHR007C-AQ07074 71 aa0.81□□□□□ -2.28
CTK3YML112W ACC1Q00955 2233 aaKnown RBP0.81□□□□□ -2.28
CTK3YML112W BNI1P41832 1953 aa0.81□□□□□ -2.28
CTK3YML112W ROM2P51862 1356 aaKnown RBP0.81□□□□□ -2.28
CTK3YML112W TY1B-DR5P0C2I2 1755 aa0.8□□□□□ -2.28
CTK3YML112W TY1B-DR6P0C2I3 1755 aa0.8□□□□□ -2.28
CTK3YML112W TY1B-LR2P0C2I5 1755 aa0.8□□□□□ -2.28
CTK3YML112W TY1B-LR3P0C2I6 1755 aaKnown RBP0.8□□□□□ -2.28
CTK3YML112W TY1B-PR1P0C2I9 1755 aaKnown RBP0.8□□□□□ -2.28
CTK3YML112W TY1B-PR3P0C2J1 1755 aaKnown RBP0.8□□□□□ -2.28
CTK3YML112W TY1B-JR1P47098 1755 aa0.8□□□□□ -2.28
CTK3YML112W TY1B-ML2Q03434 1755 aaKnown RBP0.8□□□□□ -2.28
CTK3YML112W TY1B-ER1Q03612 1755 aa0.8□□□□□ -2.28
CTK3YML112W TY1B-ML1Q04711 1755 aaKnown RBP0.8□□□□□ -2.28
CTK3YML112W TY1B-GR2Q12269 1755 aa0.8□□□□□ -2.28
CTK3YML112W TY1B-OLQ12273 1755 aa0.8□□□□□ -2.28
CTK3YML112W TY1B-GR3Q12316 1755 aa0.8□□□□□ -2.28
CTK3YML112W TY1B-PLQ12414 1755 aaKnown RBP0.8□□□□□ -2.28
CTK3YML112W TY1B-ORQ92393 1755 aa0.8□□□□□ -2.28
CTK3YML112W POL1P13382 1468 aa0.8□□□□□ -2.28
CTK3YML112W SCC2Q04002 1493 aa0.8□□□□□ -2.28
CTK3YML112W BPT1P14772 1559 aa0.8□□□□□ -2.28
CTK3YML112W YFR010W-AP0C5N0 62 aa0.8□□□□□ -2.28
CTK3YML112W STF2P16965 84 aa0.8□□□□□ -2.28
CTK3YML112W MRPL44P19956 98 aa0.8□□□□□ -2.28
CTK3YML112W TDA2P40045 126 aa0.8□□□□□ -2.28
CTK3YML112W YGR269WP40326 108 aa0.8□□□□□ -2.28
CTK3YML112W MSL1P40567 111 aaPredicted RBP0.8□□□□□ -2.28
CTK3YML112W CWP2P43497 92 aa0.8□□□□□ -2.28
CTK3YML112W YFL065CP43539 102 aa0.8□□□□□ -2.28
CTK3YML112W RPL37BP51402 88 aaKnown RBP0.8□□□□□ -2.28
CTK3YML112W MPC1P53157 130 aaKnown RBP0.8□□□□□ -2.28
CTK3YML112W THG1P53215 237 aaKnown RBP0.8□□□□□ -2.28
CTK3YML112W POP3P53833 195 aaPredicted RBP0.8□□□□□ -2.28
CTK3YML112W YIL014C-AQ02598 104 aa0.8□□□□□ -2.28
CTK3YML112W CUE4Q04201 117 aaPredicted RBP0.8□□□□□ -2.28
CTK3YML112W NMA1Q06178 401 aaKnown RBP0.8□□□□□ -2.28
CTK3YML112W PRM3Q08931 133 aa0.8□□□□□ -2.28
CTK3YML112W YPL261CQ08976 102 aa0.8□□□□□ -2.28
CTK3YML112W YPR203WQ08994 102 aa0.8□□□□□ -2.28
CTK3YML112W XRN1P22147 1528 aaKnown RBP0.79□□□□□ -2.28
CTK3YML112W TCB3Q03640 1545 aaKnown RBP0.79□□□□□ -2.28
CTK3YML112W GDB1Q06625 1536 aa0.79□□□□□ -2.28
CTK3YML112W ESP1Q03018 1630 aa0.79□□□□□ -2.28
CTK3YML112W PAU19P0CE85 124 aa0.79□□□□□ -2.28
CTK3YML112W PAU3P25610 124 aa0.79□□□□□ -2.28
CTK3YML112W YCR085WP25650 117 aa0.79□□□□□ -2.28
CTK3YML112W MRPL11P36521 249 aaPredicted RBP0.79□□□□□ -2.28
CTK3YML112W COX23P38824 151 aa0.79□□□□□ -2.28
CTK3YML112W HPA3P39979 161 aa0.79□□□□□ -2.28
CTK3YML112W YEL014CP39999 101 aa0.79□□□□□ -2.28
CTK3YML112W CYB5P40312 120 aa0.79□□□□□ -2.28
CTK3YML112W ICY1Q04329 127 aa0.79□□□□□ -2.28
CTK3YML112W YDL157CQ12082 118 aa0.79□□□□□ -2.28
CTK3YML112W YDR119W-AQ2V2P9 66 aa0.79□□□□□ -2.28
CTK3YML112W YHR213W-AQ8TGT4 77 aa0.79□□□□□ -2.28
CTK3YML112W OST5Q92316 86 aa0.79□□□□□ -2.28
CTK3YML112W YLR419WQ06698 1435 aaKnown RBP0.79□□□□□ -2.28
CTK3YML112W SIN3P22579 1536 aa0.79□□□□□ -2.28
CTK3YML112W SEC11P15367 167 aa0.78□□□□□ -2.28
CTK3YML112W RPA12P32529 125 aaKnown RBP0.78□□□□□ -2.28
CTK3YML112W RPB7P34087 171 aa0.78□□□□□ -2.28
CTK3YML112W PAU16P35994 123 aa0.78□□□□□ -2.28
CTK3YML112W YBR027CP38220 110 aa0.78□□□□□ -2.28
CTK3YML112W HUA1P40325 198 aa0.78□□□□□ -2.28
CTK3YML112W PAU15P40585 124 aa0.78□□□□□ -2.28
CTK3YML112W PAU5P43575 122 aa0.78□□□□□ -2.28
CTK3YML112W RPL22BP56628 122 aaKnown RBP0.78□□□□□ -2.28
CTK3YML112W ATP19P81451 68 aa0.78□□□□□ -2.28
CTK3YML112W YML079WQ03629 201 aa0.78□□□□□ -2.28
CTK3YML112W YLR194CQ05777 254 aa0.78□□□□□ -2.28
CTK3YML112W MHF1Q3E835 90 aa0.78□□□□□ -2.28
CTK3YML112W COA6Q3E846 104 aa0.78□□□□□ -2.28
CTK3YML112W MMS22Q06164 1454 aa0.78□□□□□ -2.28
CTK3YML112W PDR12Q02785 1511 aa0.78□□□□□ -2.28
CTK3YML112W SEC7P11075 2009 aaKnown RBP0.77□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 91.5 ms