RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeast

Gene CTR3, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR3	YLR411W	CPT1	P17898	393 aa		4.12	□□□□□ -1.75
CTR3	YLR411W	YCR023C	P25351	611 aa		4.12	□□□□□ -1.75
CTR3	YLR411W	PRY2	P36110	329 aa		4.12	□□□□□ -1.75
CTR3	YLR411W	LSM2	P38203	95 aa	Known RBP	4.12	□□□□□ -1.75
CTR3	YLR411W	YHL037C	P38733	133 aa		4.12	□□□□□ -1.75
CTR3	YLR411W	IMP2	P46972	177 aa		4.12	□□□□□ -1.75
CTR3	YLR411W	DAD4	P69851	72 aa		4.12	□□□□□ -1.75
CTR3	YLR411W	GAT3	Q07928	141 aa		4.12	□□□□□ -1.75
CTR3	YLR411W	YPL257W	Q08974	193 aa		4.12	□□□□□ -1.75
CTR3	YLR411W	YMR105W-A	Q8TGS8	64 aa		4.12	□□□□□ -1.75
CTR3	YLR411W	POL2	P21951	2222 aa	Known RBP	4.11	□□□□□ -1.75
CTR3	YLR411W	ECM33	P38248	429 aa	Known RBP	4.11	□□□□□ -1.75
CTR3	YLR411W	MGR2	Q02889	113 aa		4.11	□□□□□ -1.75
CTR3	YLR411W	MIX17	Q03667	156 aa		4.11	□□□□□ -1.75
CTR3	YLR411W	FOL3	Q12676	427 aa	Predicted RBP	4.11	□□□□□ -1.75
CTR3	YLR411W	TRP1	P00912	224 aa		4.1	□□□□□ -1.75
CTR3	YLR411W	YHR213W	P0CI67	198 aa		4.1	□□□□□ -1.75
CTR3	YLR411W	RPS8A	P0CX39	200 aa	Known RBP	4.1	□□□□□ -1.75
CTR3	YLR411W	RPS8B	P0CX40	200 aa	Known RBP	4.1	□□□□□ -1.75
CTR3	YLR411W	HYP2	P23301	157 aa	Known RBP	4.1	□□□□□ -1.75
CTR3	YLR411W	TIR2	P33890	251 aa		4.1	□□□□□ -1.75
CTR3	YLR411W	YPL073C	P40323	161 aa		4.1	□□□□□ -1.75
CTR3	YLR411W	GPI19	Q04082	140 aa		4.1	□□□□□ -1.75
CTR3	YLR411W	YDR114C	Q04597	100 aa		4.1	□□□□□ -1.75
CTR3	YLR411W	IRC25	Q07951	179 aa		4.1	□□□□□ -1.75
CTR3	YLR411W	RNH203	Q12338	110 aa		4.1	□□□□□ -1.75
CTR3	YLR411W	ADH5	P38113	351 aa	Known RBP	4.09	□□□□□ -1.75
CTR3	YLR411W	GPI18	P38211	433 aa		4.09	□□□□□ -1.75
CTR3	YLR411W	YIL014C-A	Q02598	104 aa		4.09	□□□□□ -1.75
CTR3	YLR411W	ADH6	Q04894	360 aa	Known RBP	4.09	□□□□□ -1.75
CTR3	YLR411W	FCF1	Q05498	189 aa	Predicted RBP	4.09	□□□□□ -1.75
CTR3	YLR411W	ATG39	Q06159	398 aa		4.09	□□□□□ -1.75
CTR3	YLR411W	SCS22	Q6Q595	175 aa		4.09	□□□□□ -1.75
CTR3	YLR411W	RPL39	P04650	51 aa		4.08	□□□□□ -1.76
CTR3	YLR411W	PFY1	P07274	126 aa		4.08	□□□□□ -1.76
CTR3	YLR411W	YKR045C	P36138	183 aa		4.08	□□□□□ -1.76
CTR3	YLR411W	YHR140W	P38842	239 aa		4.08	□□□□□ -1.76
CTR3	YLR411W	BEM2	P39960	2167 aa	Known RBP	4.08	□□□□□ -1.76
CTR3	YLR411W	YNL198C	P40166	100 aa		4.08	□□□□□ -1.76
CTR3	YLR411W	TOS6	P48560	102 aa		4.08	□□□□□ -1.76
CTR3	YLR411W	MST27	P53176	234 aa		4.08	□□□□□ -1.76
CTR3	YLR411W	UBC7	Q02159	165 aa		4.08	□□□□□ -1.76
CTR3	YLR411W	CDC39	P25655	2108 aa	Known RBP	4.07	□□□□□ -1.76
CTR3	YLR411W	IES6	P32617	166 aa		4.07	□□□□□ -1.76
CTR3	YLR411W	YJL027C	P47063	138 aa	Predicted RBP	4.07	□□□□□ -1.76
CTR3	YLR411W	YMR103C	Q04436	120 aa		4.07	□□□□□ -1.76
CTR3	YLR411W	TMC1	Q08422	150 aa	Predicted RBP	4.07	□□□□□ -1.76
CTR3	YLR411W	YOR029W	Q12243	111 aa		4.07	□□□□□ -1.76
CTR3	YLR411W	TIM22	Q12328	207 aa		4.07	□□□□□ -1.76
CTR3	YLR411W	SLO1	Q3E784	85 aa		4.07	□□□□□ -1.76
CTR3	YLR411W	BLM10	P43583	2143 aa		4.06	□□□□□ -1.76
CTR3	YLR411W	YKR041W	P36134	250 aa		4.06	□□□□□ -1.76
CTR3	YLR411W	SPI1	P40092	148 aa		4.06	□□□□□ -1.76
CTR3	YLR411W	YMR141C	P40211	102 aa		4.06	□□□□□ -1.76
CTR3	YLR411W	ELC1	Q03071	99 aa		4.06	□□□□□ -1.76
CTR3	YLR411W	YKL070W	P36087	169 aa		4.05	□□□□□ -1.76
CTR3	YLR411W	YKR032W	P36127	104 aa		4.05	□□□□□ -1.76
CTR3	YLR411W	ECM14	P38836	430 aa		4.05	□□□□□ -1.76
CTR3	YLR411W	PET8	P38921	284 aa		4.05	□□□□□ -1.76
CTR3	YLR411W	YER076C	P40049	302 aa		4.05	□□□□□ -1.76
CTR3	YLR411W	GLE2	P40066	365 aa		4.05	□□□□□ -1.76
CTR3	YLR411W	YNL217W	P40152	326 aa		4.05	□□□□□ -1.76
CTR3	YLR411W	POR2	P40478	281 aa		4.05	□□□□□ -1.76
CTR3	YLR411W	YFL051C	P43552	160 aa		4.05	□□□□□ -1.76
CTR3	YLR411W	LCB3	P47013	409 aa		4.05	□□□□□ -1.76
CTR3	YLR411W	SED1	Q01589	338 aa		4.05	□□□□□ -1.76
CTR3	YLR411W	DGA1	Q08650	418 aa		4.05	□□□□□ -1.76
CTR3	YLR411W	YER181C	P40097	107 aa		4.04	□□□□□ -1.76
CTR3	YLR411W	HUA1	P40325	198 aa		4.04	□□□□□ -1.76
CTR3	YLR411W	YGR219W	P53307	113 aa		4.04	□□□□□ -1.76
CTR3	YLR411W	ACC1	Q00955	2233 aa	Known RBP	4.03	□□□□□ -1.76
CTR3	YLR411W	CCW14	O13547	238 aa		4.03	□□□□□ -1.76
CTR3	YLR411W	ADH1	P00330	348 aa	Known RBP	4.03	□□□□□ -1.76
CTR3	YLR411W	PHO85	P17157	305 aa		4.03	□□□□□ -1.76
CTR3	YLR411W	MRPL49	P40858	161 aa	Predicted RBP	4.03	□□□□□ -1.76
CTR3	YLR411W	DIA1	P54005	336 aa		4.03	□□□□□ -1.76
CTR3	YLR411W	BRR2	P32639	2163 aa	Known RBP	4.03	□□□□□ -1.76
CTR3	YLR411W	MRPL38	P35996	138 aa	Predicted RBP	4.02	□□□□□ -1.77
CTR3	YLR411W	SNF11	P38956	169 aa		4.02	□□□□□ -1.77
CTR3	YLR411W	YER121W	P40076	114 aa		4.02	□□□□□ -1.77
CTR3	YLR411W	VHS2	P40463	436 aa		4.02	□□□□□ -1.77
CTR3	YLR411W	YIP3	P53633	176 aa		4.02	□□□□□ -1.77
CTR3	YLR411W	COA3	Q3E7B2	85 aa		4.02	□□□□□ -1.77
CTR3	YLR411W	IGO2	Q9P305	131 aa		4.02	□□□□□ -1.77
CTR3	YLR411W	SEC16	P48415	2195 aa	Known RBP	4.02	□□□□□ -1.77
CTR3	YLR411W	NHP2	P32495	156 aa	Predicted RBP	4.01	□□□□□ -1.77
CTR3	YLR411W	KTI12	P34253	313 aa	Known RBP	4.01	□□□□□ -1.77
CTR3	YLR411W	MIC12	P38341	106 aa		4.01	□□□□□ -1.77
CTR3	YLR411W	CTR2	P38865	189 aa		4.01	□□□□□ -1.77
CTR3	YLR411W	YNL194C	P40169	301 aa		4.01	□□□□□ -1.77
CTR3	YLR411W	JID1	Q12350	301 aa		4.01	□□□□□ -1.77
CTR3	YLR411W	SBH2	P52871	88 aa		4	□□□□□ -1.77
CTR3	YLR411W	PBP4	Q07362	185 aa	Known RBP	4	□□□□□ -1.77
CTR3	YLR411W	YOL160W	Q08321	113 aa		4	□□□□□ -1.77
CTR3	YLR411W	PRM3	Q08931	133 aa		4	□□□□□ -1.77
CTR3	YLR411W	YPL261C	Q08976	102 aa		4	□□□□□ -1.77
CTR3	YLR411W	YOR097C	Q12274	175 aa	Predicted RBP	4	□□□□□ -1.77
CTR3	YLR411W	YOR008C-A	Q3E7B9	74 aa		4	□□□□□ -1.77
CTR3	YLR411W	HMRA2	P0CY13	119 aa		3.99	□□□□□ -1.77
CTR3	YLR411W	ATX1	P38636	73 aa		3.99	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 38.8 ms