RNA–Protein interactions for RNA: YLR335W

NUP2, Transcript of Nucleoporin involved in nucleocytoplasmic transport, yeastyeast

Gene NUP2, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP2YLR335W TAO3P40468 2376 aa3.55□□□□□ -1.84
NUP2YLR335W AQY1P0CD91 305 aa3.55□□□□□ -1.84
NUP2YLR335W NHP2P32495 156 aaPredicted RBP3.55□□□□□ -1.84
NUP2YLR335W YKL070WP36087 169 aa3.55□□□□□ -1.84
NUP2YLR335W RPL32P38061 130 aaKnown RBP3.55□□□□□ -1.84
NUP2YLR335W ATX1P38636 73 aa3.55□□□□□ -1.84
NUP2YLR335W YJL027CP47063 138 aaPredicted RBP3.55□□□□□ -1.84
NUP2YLR335W DUO1P53168 247 aaKnown RBP3.55□□□□□ -1.84
NUP2YLR335W YGR045CP53229 120 aa3.55□□□□□ -1.84
NUP2YLR335W ATP23P53722 227 aa3.55□□□□□ -1.84
NUP2YLR335W MRPL38P35996 138 aaPredicted RBP3.55□□□□□ -1.84
NUP2YLR335W SNF11P38956 169 aa3.55□□□□□ -1.84
NUP2YLR335W SPI1P40092 148 aa3.55□□□□□ -1.84
NUP2YLR335W SED1Q01589 338 aa3.55□□□□□ -1.84
NUP2YLR335W PRM3Q08931 133 aa3.55□□□□□ -1.84
NUP2YLR335W YPL261CQ08976 102 aa3.55□□□□□ -1.84
NUP2YLR335W IGO2Q9P305 131 aa3.55□□□□□ -1.84
NUP2YLR335W PHO85P17157 305 aa3.54□□□□□ -1.84
NUP2YLR335W POR2P40478 281 aa3.54□□□□□ -1.84
NUP2YLR335W YFL051CP43552 160 aa3.54□□□□□ -1.84
NUP2YLR335W BNA1P47096 177 aa3.54□□□□□ -1.84
NUP2YLR335W YIP3P53633 176 aa3.54□□□□□ -1.84
NUP2YLR335W RPL15BP54780 204 aaPredicted RBP3.54□□□□□ -1.84
NUP2YLR335W RPL42AP0CX27 106 aaKnown RBP3.53□□□□□ -1.84
NUP2YLR335W RPL42BP0CX28 106 aaKnown RBP3.53□□□□□ -1.84
NUP2YLR335W KTI12P34253 313 aaKnown RBP3.53□□□□□ -1.84
NUP2YLR335W SNU13P39990 126 aaKnown RBP3.53□□□□□ -1.84
NUP2YLR335W GLE2P40066 365 aa3.53□□□□□ -1.84
NUP2YLR335W YER121WP40076 114 aa3.53□□□□□ -1.84
NUP2YLR335W LCB3P47013 409 aa3.53□□□□□ -1.84
NUP2YLR335W MOT3P54785 490 aaKnown RBP3.53□□□□□ -1.84
NUP2YLR335W YOR097CQ12274 175 aaPredicted RBP3.53□□□□□ -1.84
NUP2YLR335W COX17Q12287 69 aa3.53□□□□□ -1.84
NUP2YLR335W JID1Q12350 301 aa3.53□□□□□ -1.84
NUP2YLR335W ACC1Q00955 2233 aaKnown RBP3.53□□□□□ -1.84
NUP2YLR335W CCW14O13547 238 aa3.53□□□□□ -1.84
NUP2YLR335W HMRA2P0CY13 119 aa3.53□□□□□ -1.84
NUP2YLR335W CTR2P38865 189 aa3.53□□□□□ -1.84
NUP2YLR335W URM1P40554 99 aaPredicted RBP3.53□□□□□ -1.84
NUP2YLR335W MRPL49P40858 161 aaPredicted RBP3.53□□□□□ -1.84
NUP2YLR335W OST2P46964 130 aa3.53□□□□□ -1.84
NUP2YLR335W YGR219WP53307 113 aa3.53□□□□□ -1.84
NUP2YLR335W LSM6Q06406 86 aaKnown RBP3.53□□□□□ -1.84
NUP2YLR335W DFM1Q12743 341 aaKnown RBP3.53□□□□□ -1.84
NUP2YLR335W COA3Q3E7B2 85 aa3.53□□□□□ -1.84
NUP2YLR335W YOR008C-AQ3E7B9 74 aa3.53□□□□□ -1.84
NUP2YLR335W SEC16P48415 2195 aaKnown RBP3.53□□□□□ -1.85
NUP2YLR335W VAR1P02381 398 aa3.52□□□□□ -1.85
NUP2YLR335W YTH1Q06102 208 aaPredicted RBP3.52□□□□□ -1.85
NUP2YLR335W HPA2Q06592 156 aa3.52□□□□□ -1.85
NUP2YLR335W OXA1P39952 402 aa3.52□□□□□ -1.85
NUP2YLR335W INO4P13902 151 aa3.51□□□□□ -1.85
NUP2YLR335W GLO1P50107 326 aa3.51□□□□□ -1.85
NUP2YLR335W YOL160WQ08321 113 aa3.51□□□□□ -1.85
NUP2YLR335W CDC43P18898 376 aa3.51□□□□□ -1.85
NUP2YLR335W MIC12P38341 106 aa3.51□□□□□ -1.85
NUP2YLR335W YNR077CP53758 84 aa3.51□□□□□ -1.85
NUP2YLR335W YNL234WP53857 426 aa3.51□□□□□ -1.85
NUP2YLR335W YMR181CQ03231 154 aa3.51□□□□□ -1.85
NUP2YLR335W YLR194CQ05777 254 aa3.51□□□□□ -1.85
NUP2YLR335W BEM2P39960 2167 aaKnown RBP3.5□□□□□ -1.85
NUP2YLR335W CUP1-1P0CX80 61 aa3.5□□□□□ -1.85
NUP2YLR335W CUP1-2P0CX81 61 aa3.5□□□□□ -1.85
NUP2YLR335W AGA1P32323 725 aa3.5□□□□□ -1.85
NUP2YLR335W SBH2P52871 88 aa3.5□□□□□ -1.85
NUP2YLR335W PBP4Q07362 185 aaKnown RBP3.5□□□□□ -1.85
NUP2YLR335W RPS8AP0CX39 200 aaKnown RBP3.49□□□□□ -1.85
NUP2YLR335W RPS8BP0CX40 200 aaKnown RBP3.49□□□□□ -1.85
NUP2YLR335W COX10P21592 462 aa3.49□□□□□ -1.85
NUP2YLR335W YCR085WP25650 117 aa3.49□□□□□ -1.85
NUP2YLR335W KEG1P43614 200 aa3.49□□□□□ -1.85
NUP2YLR335W YNL092WP53934 400 aa3.49□□□□□ -1.85
NUP2YLR335W MSA1Q08471 629 aa3.49□□□□□ -1.85
NUP2YLR335W MRPL23Q12487 163 aaPredicted RBP3.49□□□□□ -1.85
NUP2YLR335W YCL048W-AQ2V2Q2 79 aa3.49□□□□□ -1.85
NUP2YLR335W NCE103P53615 221 aa3.49□□□□□ -1.85
NUP2YLR335W SNA4Q07549 140 aa3.49□□□□□ -1.85
NUP2YLR335W ISD11Q6Q560 94 aa3.49□□□□□ -1.85
NUP2YLR335W PEX17P40155 199 aa3.48□□□□□ -1.85
NUP2YLR335W YFL065CP43539 102 aa3.48□□□□□ -1.85
NUP2YLR335W YAR1P46683 200 aa3.48□□□□□ -1.85
NUP2YLR335W AIM11P87275 137 aa3.48□□□□□ -1.85
NUP2YLR335W IRC23Q08416 157 aa3.48□□□□□ -1.85
NUP2YLR335W YPR203WQ08994 102 aa3.48□□□□□ -1.85
NUP2YLR335W CCW12Q12127 133 aa3.48□□□□□ -1.85
NUP2YLR335W YEL067CP39978 195 aa3.48□□□□□ -1.85
NUP2YLR335W YNL194CP40169 301 aa3.48□□□□□ -1.85
NUP2YLR335W YCR075W-AQ3E830 75 aa3.48□□□□□ -1.85
NUP2YLR335W YPR117WQ06116 2489 aa3.47□□□□□ -1.85
NUP2YLR335W YOR304C-AO14468 76 aa3.47□□□□□ -1.85
NUP2YLR335W KRE1P17260 313 aa3.47□□□□□ -1.85
NUP2YLR335W DCV1P43595 202 aa3.47□□□□□ -1.85
NUP2YLR335W YFR057WP43625 151 aa3.47□□□□□ -1.85
NUP2YLR335W RRG8Q06109 277 aa3.47□□□□□ -1.85
NUP2YLR335W FCY1Q12178 158 aa3.47□□□□□ -1.85
NUP2YLR335W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
NUP2YLR335W TRP1P00912 224 aa3.46□□□□□ -1.85
NUP2YLR335W YHR022CP38763 256 aa3.46□□□□□ -1.85
NUP2YLR335W AIM34Q03673 198 aa3.46□□□□□ -1.85
NUP2YLR335W YDL022C-AP0C5L6 82 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 55.6 ms