RNA–Protein interactions for RNA: YLR276C

DBP9, Transcript of DEAD-box protein required for 27S rRNA processing, yeast

Gene DBP9, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP9	YLR276C	YEL067C	P39978	195 aa		4.57	□□□□□ -1.68
DBP9	YLR276C	YMR317W	Q04893	1140 aa		4.57	□□□□□ -1.68
DBP9	YLR276C	MIM1	Q08176	113 aa		4.57	□□□□□ -1.68
DBP9	YLR276C	YPR108W-A	Q3E7B3	70 aa		4.57	□□□□□ -1.68
DBP9	YLR276C	PIS1	P06197	220 aa	Known RBP	4.56	□□□□□ -1.68
DBP9	YLR276C	RPL2A	P0CX45	254 aa	Known RBP	4.56	□□□□□ -1.68
DBP9	YLR276C	RPL2B	P0CX46	254 aa	Known RBP	4.56	□□□□□ -1.68
DBP9	YLR276C	MDM10	P18409	493 aa		4.56	□□□□□ -1.68
DBP9	YLR276C	YCR050C	P25630	102 aa		4.56	□□□□□ -1.68
DBP9	YLR276C	MRPL49	P40858	161 aa	Predicted RBP	4.56	□□□□□ -1.68
DBP9	YLR276C	COF1	Q03048	143 aa	Known RBP	4.56	□□□□□ -1.68
DBP9	YLR276C	PIR1	Q03178	341 aa		4.56	□□□□□ -1.68
DBP9	YLR276C	YMR254C	Q04838	102 aa		4.56	□□□□□ -1.68
DBP9	YLR276C	IRC25	Q07951	179 aa		4.56	□□□□□ -1.68
DBP9	YLR276C	KTI11	Q3E840	82 aa		4.56	□□□□□ -1.68
DBP9	YLR276C	APS1	P35181	156 aa		4.55	□□□□□ -1.68
DBP9	YLR276C	YMR181C	Q03231	154 aa		4.55	□□□□□ -1.68
DBP9	YLR276C	DAD1	Q12248	94 aa		4.55	□□□□□ -1.68
DBP9	YLR276C	YOR097C	Q12274	175 aa	Predicted RBP	4.55	□□□□□ -1.68
DBP9	YLR276C	Q0255	P03881	472 aa		4.55	□□□□□ -1.68
DBP9	YLR276C	IMP1	P28627	190 aa		4.55	□□□□□ -1.68
DBP9	YLR276C	FZF1	P32805	299 aa		4.55	□□□□□ -1.68
DBP9	YLR276C	SMP1	P38128	452 aa		4.55	□□□□□ -1.68
DBP9	YLR276C	GPI18	P38211	433 aa		4.55	□□□□□ -1.68
DBP9	YLR276C	LST8	P41318	303 aa		4.55	□□□□□ -1.68
DBP9	YLR276C	SKI6	P46948	246 aa	Predicted RBP	4.55	□□□□□ -1.68
DBP9	YLR276C	YGR050C	P53231	118 aa		4.55	□□□□□ -1.68
DBP9	YLR276C	GPI19	Q04082	140 aa		4.55	□□□□□ -1.68
DBP9	YLR276C	API2	Q04413	109 aa		4.55	□□□□□ -1.68
DBP9	YLR276C	YOR387C	Q08910	206 aa		4.55	□□□□□ -1.68
DBP9	YLR276C	YHR139C-A	O13536	103 aa		4.54	□□□□□ -1.68
DBP9	YLR276C	TOM6	P33448	61 aa		4.54	□□□□□ -1.68
DBP9	YLR276C	YHR180W	P38868	163 aa		4.54	□□□□□ -1.68
DBP9	YLR276C	HUA1	P40325	198 aa		4.54	□□□□□ -1.68
DBP9	YLR276C	ATP19	P81451	68 aa		4.54	□□□□□ -1.68
DBP9	YLR276C	RAF1	Q06891	181 aa		4.54	□□□□□ -1.68
DBP9	YLR276C	YLR412C-A	Q3E742	68 aa		4.54	□□□□□ -1.68
DBP9	YLR276C	TOM40	P23644	387 aa	Known RBP	4.53	□□□□□ -1.68
DBP9	YLR276C	FMP46	P36141	133 aa	Known RBP	4.53	□□□□□ -1.68
DBP9	YLR276C	YHL042W	P38729	150 aa		4.53	□□□□□ -1.68
DBP9	YLR276C	SVP26	P38869	228 aa		4.53	□□□□□ -1.68
DBP9	YLR276C	PET8	P38921	284 aa		4.53	□□□□□ -1.68
DBP9	YLR276C	FIP1	P45976	327 aa		4.53	□□□□□ -1.68
DBP9	YLR276C	YNR077C	P53758	84 aa		4.53	□□□□□ -1.68
DBP9	YLR276C	LSM6	Q06406	86 aa	Known RBP	4.53	□□□□□ -1.68
DBP9	YLR276C	YPL038W-A	Q3E7B4	63 aa		4.53	□□□□□ -1.68
DBP9	YLR276C	RPL20A	P0CX23	172 aa	Known RBP	4.53	□□□□□ -1.69
DBP9	YLR276C	RPL20B	P0CX24	172 aa	Predicted RBP	4.53	□□□□□ -1.69
DBP9	YLR276C	YGR219W	P53307	113 aa		4.53	□□□□□ -1.69
DBP9	YLR276C	KSH1	Q8TGJ3	72 aa		4.53	□□□□□ -1.69
DBP9	YLR276C	HTL1	Q9URQ5	78 aa		4.53	□□□□□ -1.69
DBP9	YLR276C	MRPL31	P14063	131 aa	Predicted RBP	4.52	□□□□□ -1.69
DBP9	YLR276C	YMR31	P19955	123 aa		4.52	□□□□□ -1.69
DBP9	YLR276C	ROX3	P25046	220 aa		4.52	□□□□□ -1.69
DBP9	YLR276C	DSE2	P38844	325 aa		4.52	□□□□□ -1.69
DBP9	YLR276C	YNL208W	P40159	199 aa	Known RBP	4.52	□□□□□ -1.69
DBP9	YLR276C	SFT1	P43682	97 aa		4.52	□□□□□ -1.69
DBP9	YLR276C	YOL029C	Q08187	201 aa		4.52	□□□□□ -1.69
DBP9	YLR276C	YOL118C	Q08259	102 aa		4.52	□□□□□ -1.69
DBP9	YLR276C	HNT3	Q08702	217 aa		4.52	□□□□□ -1.69
DBP9	YLR276C	BOL1	Q3E793	110 aa		4.52	□□□□□ -1.69
DBP9	YLR276C	YDL022C-A	P0C5L6	82 aa		4.51	□□□□□ -1.69
DBP9	YLR276C	YHL018W	P38744	120 aa	Predicted RBP	4.51	□□□□□ -1.69
DBP9	YLR276C	YMR175W-A	Q3E766	64 aa		4.51	□□□□□ -1.69
DBP9	YLR276C	TRP1	P00912	224 aa		4.5	□□□□□ -1.69
DBP9	YLR276C	MRS3	P10566	314 aa		4.5	□□□□□ -1.69
DBP9	YLR276C	IES6	P32617	166 aa		4.5	□□□□□ -1.69
DBP9	YLR276C	GLE2	P40066	365 aa		4.5	□□□□□ -1.69
DBP9	YLR276C	YHR173C	P38864	112 aa		4.5	□□□□□ -1.69
DBP9	YLR276C	SDC1	Q03323	175 aa		4.5	□□□□□ -1.69
DBP9	YLR276C	SWD3	P38123	315 aa		4.49	□□□□□ -1.69
DBP9	YLR276C	OST1	P41543	476 aa	Known RBP	4.49	□□□□□ -1.69
DBP9	YLR276C	MST27	P53176	234 aa		4.49	□□□□□ -1.69
DBP9	YLR276C	YGR164W	P53291	111 aa		4.49	□□□□□ -1.69
DBP9	YLR276C	MIX14	Q04341	121 aa		4.49	□□□□□ -1.69
DBP9	YLR276C	VTC1	P40046	129 aa	RIP-Chip data	4.48	□□□□□ -1.69	not detected
DBP9	YLR276C	WWM1	P43582	211 aa	Known RBP	4.48	□□□□□ -1.69
DBP9	YLR276C	TOM7	P53507	60 aa		4.48	□□□□□ -1.69
DBP9	YLR276C	YOR343C	Q12484	108 aa		4.48	□□□□□ -1.69
DBP9	YLR276C	YOR192C-C	Q3E736	78 aa		4.48	□□□□□ -1.69
DBP9	YLR276C	YKR032W	P36127	104 aa		4.48	□□□□□ -1.69
DBP9	YLR276C	PAU7	P39545	55 aa		4.48	□□□□□ -1.69
DBP9	YLR276C	YDR381C-A	Q3E6R5	114 aa		4.48	□□□□□ -1.69
DBP9	YLR276C	YNL277W-A	Q3E7Z0	62 aa		4.48	□□□□□ -1.69
DBP9	YLR276C	RPS8A	P0CX39	200 aa	Known RBP	4.47	□□□□□ -1.69
DBP9	YLR276C	RPS8B	P0CX40	200 aa	Known RBP	4.47	□□□□□ -1.69
DBP9	YLR276C	RRT13	P40042	185 aa		4.47	□□□□□ -1.69
DBP9	YLR276C	YIA6	P40556	373 aa		4.47	□□□□□ -1.69
DBP9	YLR276C	YFL051C	P43552	160 aa		4.47	□□□□□ -1.69
DBP9	YLR276C	SWS2	P53937	143 aa		4.47	□□□□□ -1.69
DBP9	YLR276C	YLR281C	Q05863	155 aa		4.47	□□□□□ -1.69
DBP9	YLR276C	IRC23	Q08416	157 aa		4.47	□□□□□ -1.69
DBP9	YLR276C	YFR054C	P43622	192 aa		4.46	□□□□□ -1.7
DBP9	YLR276C	HSK3	P69852	69 aa		4.46	□□□□□ -1.7
DBP9	YLR276C	YHP1	Q04116	353 aa		4.46	□□□□□ -1.7
DBP9	YLR276C	SHH4	Q06236	168 aa		4.46	□□□□□ -1.7
DBP9	YLR276C	FIT2	Q08906	153 aa		4.46	□□□□□ -1.7
DBP9	YLR276C	YPL261C	Q08976	102 aa		4.46	□□□□□ -1.7
DBP9	YLR276C	IGO2	Q9P305	131 aa		4.46	□□□□□ -1.7
DBP9	YLR276C	FPR2	P32472	135 aa		4.45	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms