RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W SIM1P40472 476 aa8.62□□□□□ -1.03
SIM1YIL123W POP3P53833 195 aaPredicted RBP8.62□□□□□ -1.03
SIM1YIL123W DPP1Q05521 289 aa8.62□□□□□ -1.03
SIM1YIL123W YOL085CQ99345 113 aa8.62□□□□□ -1.03
SIM1YIL123W MOT3P54785 490 aaKnown RBP8.61□□□□□ -1.03
SIM1YIL123W NAT5Q08689 176 aa8.61□□□□□ -1.03
SIM1YIL123W PRY2P36110 329 aa8.6□□□□□ -1.03
SIM1YIL123W KEG1P43614 200 aa8.6□□□□□ -1.03
SIM1YIL123W MGR2Q02889 113 aa8.6□□□□□ -1.03
SIM1YIL123W YMR244WQ04018 355 aa8.6□□□□□ -1.03
SIM1YIL123W TAR1Q8TGM6 124 aa8.6□□□□□ -1.03
SIM1YIL123W YHR212W-AP0CX91 67 aa8.59□□□□□ -1.03
SIM1YIL123W UTR5P32630 166 aa8.59□□□□□ -1.03
SIM1YIL123W HAC1P41546 238 aa8.59□□□□□ -1.03
SIM1YIL123W YLR050CQ12155 161 aaKnown RBP8.59□□□□□ -1.03
SIM1YIL123W YBR200W-AQ3E755 54 aa8.59□□□□□ -1.03
SIM1YIL123W SEC11P15367 167 aa8.58□□□□□ -1.04
SIM1YIL123W ELF1P36053 145 aa8.58□□□□□ -1.04
SIM1YIL123W MIG3P39943 394 aa8.58□□□□□ -1.04
SIM1YIL123W SAE3P89114 91 aa8.58□□□□□ -1.04
SIM1YIL123W YDR042CQ03205 200 aa8.58□□□□□ -1.04
SIM1YIL123W YDL157CQ12082 118 aa8.58□□□□□ -1.04
SIM1YIL123W YPR014CQ6B0W2 109 aa8.58□□□□□ -1.04
SIM1YIL123W PFY1P07274 126 aa8.57□□□□□ -1.04
SIM1YIL123W YCR007CP25354 239 aa8.57□□□□□ -1.04
SIM1YIL123W YDL186WP48568 277 aa8.57□□□□□ -1.04
SIM1YIL123W MIC26P50087 233 aa8.57□□□□□ -1.04
SIM1YIL123W YGL230CP53074 147 aa8.57□□□□□ -1.04
SIM1YIL123W MRPS8Q03799 155 aa8.57□□□□□ -1.04
SIM1YIL123W PKR1Q03880 122 aaKnown RBP8.57□□□□□ -1.04
SIM1YIL123W GRH1Q04410 372 aaKnown RBP8.57□□□□□ -1.04
SIM1YIL123W TVP18Q04767 167 aa8.57□□□□□ -1.04
SIM1YIL123W YCR023CP25351 611 aa8.56□□□□□ -1.04
SIM1YIL123W KTI12P34253 313 aaKnown RBP8.56□□□□□ -1.04
SIM1YIL123W YER076CP40049 302 aa8.55□□□□□ -1.04
SIM1YIL123W ALG13P53178 202 aa8.55□□□□□ -1.04
SIM1YIL123W YDR366CP87287 132 aa8.55□□□□□ -1.04
SIM1YIL123W FCF1Q05498 189 aaPredicted RBP8.55□□□□□ -1.04
SIM1YIL123W YOR097CQ12274 175 aaPredicted RBP8.55□□□□□ -1.04
SIM1YIL123W SAL1D6W196 494 aa8.54□□□□□ -1.04
SIM1YIL123W RPL27BP0C2H7 136 aaKnown RBP8.54□□□□□ -1.04
SIM1YIL123W MSA1Q08471 629 aa8.54□□□□□ -1.04
SIM1YIL123W FYV4P38783 130 aaPredicted RBP8.54□□□□□ -1.04
SIM1YIL123W MPC2P38857 129 aa8.54□□□□□ -1.04
SIM1YIL123W DUO1P53168 247 aaKnown RBP8.54□□□□□ -1.04
SIM1YIL123W ATP23P53722 227 aa8.54□□□□□ -1.04
SIM1YIL123W MSC3Q05812 728 aa8.54□□□□□ -1.04
SIM1YIL123W YPR053CQ6Q5F3 151 aa8.54□□□□□ -1.04
SIM1YIL123W AQY1P0CD91 305 aa8.53□□□□□ -1.04
SIM1YIL123W RPL42AP0CX27 106 aaKnown RBP8.53□□□□□ -1.04
SIM1YIL123W RPL42BP0CX28 106 aaKnown RBP8.53□□□□□ -1.04
SIM1YIL123W PRE1P22141 198 aaKnown RBP8.53□□□□□ -1.04
SIM1YIL123W MIG1P27705 504 aa8.53□□□□□ -1.04
SIM1YIL123W MSL1P40567 111 aaPredicted RBP8.53□□□□□ -1.04
SIM1YIL123W SCS22Q6Q595 175 aa8.53□□□□□ -1.04
SIM1YIL123W Q0255P03881 472 aa8.52□□□□□ -1.05
SIM1YIL123W RPL16BP26785 198 aaKnown RBP8.52□□□□□ -1.05
SIM1YIL123W ECM33P38248 429 aaKnown RBP8.52□□□□□ -1.05
SIM1YIL123W TOS6P48560 102 aa8.52□□□□□ -1.05
SIM1YIL123W PAU23Q07987 124 aa8.52□□□□□ -1.05
SIM1YIL123W PAU17Q12370 124 aa8.52□□□□□ -1.05
SIM1YIL123W YGR035W-AQ45U48 73 aa8.52□□□□□ -1.05
SIM1YIL123W YBR144CP34215 104 aa8.51□□□□□ -1.05
SIM1YIL123W APS1P35181 156 aa8.51□□□□□ -1.05
SIM1YIL123W VPS71Q03433 280 aa8.51□□□□□ -1.05
SIM1YIL123W MSN1P22148 382 aa8.5□□□□□ -1.05
SIM1YIL123W PCL2P25693 308 aa8.5□□□□□ -1.05
SIM1YIL123W GLC8P41818 229 aa8.5□□□□□ -1.05
SIM1YIL123W BET5Q03630 159 aa8.5□□□□□ -1.05
SIM1YIL123W AIM34Q03673 198 aa8.5□□□□□ -1.05
SIM1YIL123W YFR035CP43608 114 aa8.49□□□□□ -1.05
SIM1YIL123W RTG1P32607 177 aa8.48□□□□□ -1.05
SIM1YIL123W GLO1P50107 326 aa8.48□□□□□ -1.05
SIM1YIL123W YMR103CQ04436 120 aa8.48□□□□□ -1.05
SIM1YIL123W YKR070WP36151 352 aaKnown RBP8.47□□□□□ -1.05
SIM1YIL123W YLR112WQ12130 139 aa8.47□□□□□ -1.05
SIM1YIL123W RPL2AP0CX45 254 aaKnown RBP8.46□□□□□ -1.05
SIM1YIL123W RPL2BP0CX46 254 aaKnown RBP8.46□□□□□ -1.05
SIM1YIL123W YCH1P42937 148 aa8.46□□□□□ -1.05
SIM1YIL123W RPS11AP0CX47 156 aaKnown RBP8.46□□□□□ -1.06
SIM1YIL123W RPS11BP0CX48 156 aaKnown RBP8.46□□□□□ -1.06
SIM1YIL123W RRT13P40042 185 aa8.46□□□□□ -1.06
SIM1YIL123W DCV1P43595 202 aa8.46□□□□□ -1.06
SIM1YIL123W MHR1Q06630 226 aa8.46□□□□□ -1.06
SIM1YIL123W YLR042CQ07990 161 aa8.46□□□□□ -1.06
SIM1YIL123W YKL044WP36092 106 aa8.45□□□□□ -1.06
SIM1YIL123W AGE2P40529 298 aa8.45□□□□□ -1.06
SIM1YIL123W DGA1Q08650 418 aa8.45□□□□□ -1.06
SIM1YIL123W COA3Q3E7B2 85 aa8.45□□□□□ -1.06
SIM1YIL123W RPL31AP0C2H8 113 aaKnown RBP8.44□□□□□ -1.06
SIM1YIL123W HMRA2P0CY13 119 aa8.44□□□□□ -1.06
SIM1YIL123W NUP42P49686 430 aaKnown RBP8.44□□□□□ -1.06
SIM1YIL123W YDR274CP87283 123 aa8.44□□□□□ -1.06
SIM1YIL123W YOR008C-AQ3E7B9 74 aa8.44□□□□□ -1.06
SIM1YIL123W HAP3P13434 144 aa8.43□□□□□ -1.06
SIM1YIL123W VHS2P40463 436 aa8.43□□□□□ -1.06
SIM1YIL123W CYC7P00045 113 aa8.42□□□□□ -1.06
SIM1YIL123W YKL070WP36087 169 aa8.41□□□□□ -1.06
SIM1YIL123W URM1P40554 99 aaPredicted RBP8.39□□□□□ -1.07
SIM1YIL123W YJR146WP47174 117 aa8.39□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 80.6 ms