RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C MRPL20P22354 195 aaPredicted RBP2.3□□□□□ -2.04
NMD2YHR077C VMA16P23968 213 aa2.3□□□□□ -2.04
NMD2YHR077C RPL15BP54780 204 aaPredicted RBP2.3□□□□□ -2.04
NMD2YHR077C SAE3P89114 91 aa2.3□□□□□ -2.04
NMD2YHR077C NUM1Q00402 2748 aa2.3□□□□□ -2.04
NMD2YHR077C YHR022CP38763 256 aa2.29□□□□□ -2.04
NMD2YHR077C GRH1Q04410 372 aaKnown RBP2.29□□□□□ -2.04
NMD2YHR077C CNL1Q06333 122 aa2.29□□□□□ -2.04
NMD2YHR077C MBF1O14467 151 aaKnown RBP2.29□□□□□ -2.04
NMD2YHR077C VAR1P02381 398 aa2.29□□□□□ -2.04
NMD2YHR077C RPL27AP0C2H6 136 aaKnown RBP2.29□□□□□ -2.04
NMD2YHR077C DAD1Q12248 94 aa2.29□□□□□ -2.04
NMD2YHR077C COA3Q3E7B2 85 aa2.29□□□□□ -2.04
NMD2YHR077C PFY1P07274 126 aa2.29□□□□□ -2.04
NMD2YHR077C CMC1P36064 111 aa2.29□□□□□ -2.04
NMD2YHR077C VPS55P47111 140 aa2.29□□□□□ -2.04
NMD2YHR077C DGA1Q08650 418 aa2.29□□□□□ -2.04
NMD2YHR077C TIM22Q12328 207 aa2.29□□□□□ -2.04
NMD2YHR077C PHO85P17157 305 aa2.28□□□□□ -2.04
NMD2YHR077C YCR007CP25354 239 aa2.28□□□□□ -2.04
NMD2YHR077C YER076CP40049 302 aa2.28□□□□□ -2.04
NMD2YHR077C MRPL49P40858 161 aaPredicted RBP2.28□□□□□ -2.04
NMD2YHR077C UPS3Q04006 179 aa2.28□□□□□ -2.04
NMD2YHR077C GTO3Q04806 366 aa2.28□□□□□ -2.04
NMD2YHR077C PRM7Q12459 698 aa2.28□□□□□ -2.04
NMD2YHR077C YBR200W-AQ3E755 54 aa2.28□□□□□ -2.04
NMD2YHR077C FEN2P25621 512 aaKnown RBP2.28□□□□□ -2.04
NMD2YHR077C MST28P39552 234 aa2.28□□□□□ -2.04
NMD2YHR077C ABM1P47146 123 aa2.28□□□□□ -2.04
NMD2YHR077C MST27P53176 234 aa2.28□□□□□ -2.04
NMD2YHR077C YNR077CP53758 84 aa2.28□□□□□ -2.04
NMD2YHR077C TVP18Q04767 167 aa2.28□□□□□ -2.04
NMD2YHR077C HOR7Q05827 59 aa2.28□□□□□ -2.04
NMD2YHR077C YNL146C-AQ3E7Z1 64 aa2.28□□□□□ -2.04
NMD2YHR077C YKR070WP36151 352 aaKnown RBP2.27□□□□□ -2.05
NMD2YHR077C YHR140WP38842 239 aa2.27□□□□□ -2.05
NMD2YHR077C CAX4P53223 239 aa2.27□□□□□ -2.05
NMD2YHR077C MSC3Q05812 728 aa2.27□□□□□ -2.05
NMD2YHR077C IZH3Q07959 543 aa2.27□□□□□ -2.05
NMD2YHR077C YLR050CQ12155 161 aaKnown RBP2.27□□□□□ -2.05
NMD2YHR077C TOR1P35169 2470 aa2.27□□□□□ -2.05
NMD2YHR077C CUP1-1P0CX80 61 aa2.27□□□□□ -2.05
NMD2YHR077C CUP1-2P0CX81 61 aa2.27□□□□□ -2.05
NMD2YHR077C SNF11P38956 169 aa2.27□□□□□ -2.05
NMD2YHR077C MSL1P40567 111 aaPredicted RBP2.27□□□□□ -2.05
NMD2YHR077C TOS6P48560 102 aa2.27□□□□□ -2.05
NMD2YHR077C DUO1P53168 247 aaKnown RBP2.27□□□□□ -2.05
NMD2YHR077C CAB4P53332 305 aa2.27□□□□□ -2.05
NMD2YHR077C UBC7Q02159 165 aa2.27□□□□□ -2.05
NMD2YHR077C MSA1Q08471 629 aa2.27□□□□□ -2.05
NMD2YHR077C RPL27BP0C2H7 136 aaKnown RBP2.27□□□□□ -2.05
NMD2YHR077C YMR103CQ04436 120 aa2.27□□□□□ -2.05
NMD2YHR077C SPG4Q04438 115 aa2.27□□□□□ -2.05
NMD2YHR077C YNL198CP40166 100 aa2.26□□□□□ -2.05
NMD2YHR077C YDR366CP87287 132 aa2.26□□□□□ -2.05
NMD2YHR077C YMR244WQ04018 355 aa2.26□□□□□ -2.05
NMD2YHR077C YKL070WP36087 169 aa2.26□□□□□ -2.05
NMD2YHR077C YCR041WP37265 110 aa2.26□□□□□ -2.05
NMD2YHR077C UIP3P39547 235 aa2.26□□□□□ -2.05
NMD2YHR077C MIG3P39943 394 aa2.26□□□□□ -2.05
NMD2YHR077C VTC1P40046 129 aaRIP-Chip data2.26□□□□□ -2.05not detected
NMD2YHR077C YER135CP40082 130 aa2.26□□□□□ -2.05
NMD2YHR077C MRPL23Q12487 163 aaPredicted RBP2.26□□□□□ -2.05
NMD2YHR077C YPR053CQ6Q5F3 151 aa2.26□□□□□ -2.05
NMD2YHR077C SAL1D6W196 494 aa2.25□□□□□ -2.05
NMD2YHR077C SEC72P39742 193 aaKnown RBP2.25□□□□□ -2.05
NMD2YHR077C MIC26P50087 233 aa2.25□□□□□ -2.05
NMD2YHR077C TOS8P53147 276 aa2.25□□□□□ -2.05
NMD2YHR077C YIP3P53633 176 aa2.25□□□□□ -2.05
NMD2YHR077C MRPS12P53732 153 aa2.25□□□□□ -2.05
NMD2YHR077C WIP1Q2V2P8 89 aa2.25□□□□□ -2.05
NMD2YHR077C RPL16BP26785 198 aaKnown RBP2.25□□□□□ -2.05
NMD2YHR077C KTI12P34253 313 aaKnown RBP2.25□□□□□ -2.05
NMD2YHR077C YKL044WP36092 106 aa2.25□□□□□ -2.05
NMD2YHR077C SIM1P40472 476 aa2.25□□□□□ -2.05
NMD2YHR077C HAP3P13434 144 aa2.25□□□□□ -2.05
NMD2YHR077C RRT13P40042 185 aa2.25□□□□□ -2.05
NMD2YHR077C YJR146WP47174 117 aa2.25□□□□□ -2.05
NMD2YHR077C MRPS8Q03799 155 aa2.25□□□□□ -2.05
NMD2YHR077C YOR011W-AQ3E807 68 aa2.25□□□□□ -2.05
NMD2YHR077C YHL044WP38727 235 aa2.24□□□□□ -2.05
NMD2YHR077C GLC8P41818 229 aa2.24□□□□□ -2.05
NMD2YHR077C YLR296WQ05898 108 aa2.24□□□□□ -2.05
NMD2YHR077C RPB9P27999 122 aa2.24□□□□□ -2.05
NMD2YHR077C YPL073CP40323 161 aa2.24□□□□□ -2.05
NMD2YHR077C SCW10Q04951 389 aa2.24□□□□□ -2.05
NMD2YHR077C SPO24Q3E752 67 aa2.24□□□□□ -2.05
NMD2YHR077C HMRA2P0CY13 119 aa2.23□□□□□ -2.05
NMD2YHR077C ECM33P38248 429 aaKnown RBP2.23□□□□□ -2.05
NMD2YHR077C VHS2P40463 436 aa2.23□□□□□ -2.05
NMD2YHR077C COX16P47081 118 aa2.23□□□□□ -2.05
NMD2YHR077C SRL1Q08673 210 aa2.23□□□□□ -2.05
NMD2YHR077C RPL15AP05748 204 aaKnown RBP2.23□□□□□ -2.05
NMD2YHR077C RPL16AP26784 199 aaKnown RBP2.23□□□□□ -2.05
NMD2YHR077C GLO1P50107 326 aa2.23□□□□□ -2.05
NMD2YHR077C ATP23P53722 227 aa2.23□□□□□ -2.05
NMD2YHR077C DIF1O13577 133 aa2.23□□□□□ -2.05
NMD2YHR077C APS1P35181 156 aa2.23□□□□□ -2.05
NMD2YHR077C YFR057WP43625 151 aa2.23□□□□□ -2.05
NMD2YHR077C DIA1P54005 336 aa2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 72.5 ms