RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W CMC4Q3E7A9 73 aa1.4□□□□□ -2.19
CBF2YGR140W YNL146C-AQ3E7Z1 64 aa1.4□□□□□ -2.19
CBF2YGR140W YGL149WP53116 101 aa1.39□□□□□ -2.19
CBF2YGR140W SED1Q01589 338 aa1.39□□□□□ -2.19
CBF2YGR140W OST5Q92316 86 aa1.39□□□□□ -2.19
CBF2YGR140W YPK9Q12697 1472 aa1.39□□□□□ -2.19
CBF2YGR140W DNF1P32660 1571 aa1.39□□□□□ -2.19
CBF2YGR140W RPL13BP40212 199 aaKnown RBP1.39□□□□□ -2.19
CBF2YGR140W YFL051CP43552 160 aa1.39□□□□□ -2.19
CBF2YGR140W YPL261CQ08976 102 aa1.39□□□□□ -2.19
CBF2YGR140W RPA190P10964 1664 aaKnown RBP1.39□□□□□ -2.19
CBF2YGR140W YRF1-3P0CX14 1859 aa1.39□□□□□ -2.19
CBF2YGR140W YRF1-7P0CX15 1859 aa1.39□□□□□ -2.19
CBF2YGR140W YRF1-6P53819 1859 aa1.39□□□□□ -2.19
CBF2YGR140W RPL36BO14455 100 aaKnown RBP1.38□□□□□ -2.19
CBF2YGR140W RPL36AP05745 100 aaPredicted RBP1.38□□□□□ -2.19
CBF2YGR140W MIX14Q04341 121 aa1.38□□□□□ -2.19
CBF2YGR140W DAD1Q12248 94 aa1.38□□□□□ -2.19
CBF2YGR140W COA6Q3E846 104 aa1.38□□□□□ -2.19
CBF2YGR140W YLR419WQ06698 1435 aaKnown RBP1.38□□□□□ -2.19
CBF2YGR140W YLR162WQ06235 118 aa1.37□□□□□ -2.19
CBF2YGR140W MHF1Q3E835 90 aa1.37□□□□□ -2.19
CBF2YGR140W TAR1Q8TGM6 124 aa1.37□□□□□ -2.19
CBF2YGR140W ROM2P51862 1356 aaKnown RBP1.37□□□□□ -2.19
CBF2YGR140W RIF1P29539 1916 aa1.37□□□□□ -2.19
CBF2YGR140W YHR213WP0CI67 198 aa1.37□□□□□ -2.19
CBF2YGR140W YCL042WP25572 119 aa1.37□□□□□ -2.19
CBF2YGR140W RPL22BP56628 122 aaKnown RBP1.37□□□□□ -2.19
CBF2YGR140W LTE1P07866 1435 aa1.36□□□□□ -2.19
CBF2YGR140W YBR027CP38220 110 aa1.36□□□□□ -2.19
CBF2YGR140W LST8P41318 303 aa1.36□□□□□ -2.19
CBF2YGR140W ESP1Q03018 1630 aa1.36□□□□□ -2.19
CBF2YGR140W RPL33AP05744 107 aaKnown RBP1.35□□□□□ -2.19
CBF2YGR140W RPL40AP0CH08 128 aaKnown RBP1.35□□□□□ -2.19
CBF2YGR140W RPL40BP0CH09 128 aaKnown RBP1.35□□□□□ -2.19
CBF2YGR140W NHP10Q03435 203 aa1.35□□□□□ -2.19
CBF2YGR140W YGL010WP25338 174 aa1.35□□□□□ -2.19
CBF2YGR140W IRC21Q04772 201 aa1.35□□□□□ -2.19
CBF2YGR140W KSH1Q8TGJ3 72 aa1.35□□□□□ -2.19
CBF2YGR140W MIC10Q96VH5 97 aa1.35□□□□□ -2.19
CBF2YGR140W RSF2P46974 1380 aa1.34□□□□□ -2.19
CBF2YGR140W YGL014C-AP0C5N1 53 aa1.34□□□□□ -2.19
CBF2YGR140W FPR1P20081 114 aaKnown RBP1.34□□□□□ -2.19
CBF2YGR140W YHR130CP38834 111 aa1.34□□□□□ -2.19
CBF2YGR140W RSM19P53733 91 aaPredicted RBP1.34□□□□□ -2.19
CBF2YGR140W HPA2Q06592 156 aa1.34□□□□□ -2.19
CBF2YGR140W COA3Q3E7B2 85 aa1.34□□□□□ -2.19
CBF2YGR140W HAP1P0CE41 1502 aa1.34□□□□□ -2.19
CBF2YGR140W YHL005CP38752 130 aa1.34□□□□□ -2.2
CBF2YGR140W YEL008WP40001 126 aa1.34□□□□□ -2.2
CBF2YGR140W POR2P40478 281 aa1.34□□□□□ -2.2
CBF2YGR140W SRX1P36077 127 aa1.33□□□□□ -2.2
CBF2YGR140W YIR020CP40575 100 aa1.33□□□□□ -2.2
CBF2YGR140W SNN1P48232 102 aa1.33□□□□□ -2.2
CBF2YGR140W YCR075W-AQ3E830 75 aa1.33□□□□□ -2.2
CBF2YGR140W YMR122CQ03879 124 aa1.33□□□□□ -2.2
CBF2YGR140W YJL009WP47078 108 aa1.33□□□□□ -2.2
CBF2YGR140W FIT3Q08907 204 aa1.33□□□□□ -2.2
CBF2YGR140W YCL048W-AQ2V2Q2 79 aa1.33□□□□□ -2.2
CBF2YGR140W PCC1Q3E833 88 aa1.33□□□□□ -2.2
CBF2YGR140W NTE1Q04958 1679 aa1.32□□□□□ -2.2
CBF2YGR140W GSC2P40989 1895 aa1.32□□□□□ -2.2
CBF2YGR140W ATG8P38182 117 aaRIP-Chip data1.32□□□□□ -2.2not detected
CBF2YGR140W YBR242WP38331 238 aa1.32□□□□□ -2.2
CBF2YGR140W PAU12P53343 120 aa1.32□□□□□ -2.2
CBF2YGR140W YLR194CQ05777 254 aa1.32□□□□□ -2.2
CBF2YGR140W YHR138CP38841 114 aaPredicted RBP1.31□□□□□ -2.2
CBF2YGR140W ICS3P47034 131 aa1.31□□□□□ -2.2
CBF2YGR140W YOR072WQ08486 104 aa1.31□□□□□ -2.2
CBF2YGR140W YLR363W-AQ3E747 85 aa1.31□□□□□ -2.2
CBF2YGR140W SPT6P23615 1451 aaKnown RBP1.31□□□□□ -2.2
CBF2YGR140W SIN3P22579 1536 aa1.31□□□□□ -2.2
CBF2YGR140W PAU19P0CE85 124 aa1.3□□□□□ -2.2
CBF2YGR140W PAU3P25610 124 aa1.3□□□□□ -2.2
CBF2YGR140W SNU13P39990 126 aaKnown RBP1.3□□□□□ -2.2
CBF2YGR140W MSL1P40567 111 aaPredicted RBP1.3□□□□□ -2.2
CBF2YGR140W YMR321CQ04898 105 aa1.3□□□□□ -2.2
CBF2YGR140W PRM3Q08931 133 aa1.3□□□□□ -2.2
CBF2YGR140W EMC5P40540 141 aa1.3□□□□□ -2.2
CBF2YGR140W YMR082CQ04276 118 aa1.3□□□□□ -2.2
CBF2YGR140W COA4Q05809 96 aa1.3□□□□□ -2.2
CBF2YGR140W RPL22AP05749 121 aaKnown RBP1.29□□□□□ -2.2
CBF2YGR140W PAU2P32612 120 aa1.29□□□□□ -2.2
CBF2YGR140W COX23P38824 151 aa1.29□□□□□ -2.2
CBF2YGR140W YNL122CP53921 115 aaPredicted RBP1.29□□□□□ -2.2
CBF2YGR140W SRB6P32570 121 aa1.29□□□□□ -2.2
CBF2YGR140W YHL037CP38733 133 aa1.29□□□□□ -2.2
CBF2YGR140W YFL065CP43539 102 aa1.29□□□□□ -2.2
CBF2YGR140W SEN15Q04675 128 aa1.29□□□□□ -2.2
CBF2YGR140W YSP2Q06681 1438 aa1.29□□□□□ -2.2
CBF2YGR140W YDR029WQ12111 104 aa1.29□□□□□ -2.2
CBF2YGR140W YOR093CQ12275 1648 aa1.28□□□□□ -2.2
CBF2YGR140W UBR2Q07963 1872 aa1.28□□□□□ -2.2
CBF2YGR140W FAS1P07149 2051 aaKnown RBP1.28□□□□□ -2.2
CBF2YGR140W YHR212W-AP0CX91 67 aa1.28□□□□□ -2.2
CBF2YGR140W PAU16P35994 123 aa1.28□□□□□ -2.2
CBF2YGR140W PAU24P38155 120 aa1.28□□□□□ -2.2
CBF2YGR140W YAR064WP39563 99 aa1.28□□□□□ -2.2
CBF2YGR140W YIL163CP40448 117 aa1.28□□□□□ -2.2
CBF2YGR140W PAU15P40585 124 aa1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms