RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W GSC2P40989 1895 aa1.86□□□□□ -2.11
PRP18YGR006W BPT1P14772 1559 aa1.86□□□□□ -2.11
PRP18YGR006W HMRA1P0CY11 126 aa1.86□□□□□ -2.11
PRP18YGR006W IPT1P38954 527 aa1.86□□□□□ -2.11
PRP18YGR006W HUR1P45820 110 aa1.86□□□□□ -2.11
PRP18YGR006W FIT2Q08906 153 aa1.86□□□□□ -2.11
PRP18YGR006W YPK9Q12697 1472 aa1.86□□□□□ -2.11
PRP18YGR006W ROM2P51862 1356 aaKnown RBP1.85□□□□□ -2.11
PRP18YGR006W MDM35O60200 86 aa1.85□□□□□ -2.11
PRP18YGR006W RPL40AP0CH08 128 aaKnown RBP1.85□□□□□ -2.11
PRP18YGR006W RPL40BP0CH09 128 aaKnown RBP1.85□□□□□ -2.11
PRP18YGR006W EMC5P40540 141 aa1.85□□□□□ -2.11
PRP18YGR006W MSL1P40567 111 aaPredicted RBP1.85□□□□□ -2.11
PRP18YGR006W DCV1P43595 202 aa1.85□□□□□ -2.11
PRP18YGR006W DAD4P69851 72 aa1.85□□□□□ -2.11
PRP18YGR006W ELP6Q04868 273 aa1.85□□□□□ -2.11
PRP18YGR006W COA6Q3E846 104 aa1.85□□□□□ -2.11
PRP18YGR006W RIF1P29539 1916 aa1.85□□□□□ -2.11
PRP18YGR006W RPS25BP0C0T4 108 aaKnown RBP1.84□□□□□ -2.11
PRP18YGR006W SRB6P32570 121 aa1.84□□□□□ -2.11
PRP18YGR006W HPA3P39979 161 aa1.84□□□□□ -2.11
PRP18YGR006W VMA21P41806 77 aa1.84□□□□□ -2.11
PRP18YGR006W SEN15Q04675 128 aa1.84□□□□□ -2.11
PRP18YGR006W NAT5Q08689 176 aa1.84□□□□□ -2.11
PRP18YGR006W YPL261CQ08976 102 aa1.84□□□□□ -2.11
PRP18YGR006W RPS25AQ3E792 108 aaPredicted RBP1.84□□□□□ -2.11
PRP18YGR006W DNA2P38859 1522 aa1.83□□□□□ -2.12
PRP18YGR006W ECM12O13529 151 aa1.83□□□□□ -2.12
PRP18YGR006W YJL197C-AP0C5P0 93 aa1.83□□□□□ -2.12
PRP18YGR006W FUN14P18411 198 aa1.83□□□□□ -2.12
PRP18YGR006W HSP10P38910 106 aa1.83□□□□□ -2.12
PRP18YGR006W YEL014CP39999 101 aa1.83□□□□□ -2.12
PRP18YGR006W HYR1P40581 163 aaKnown RBP1.83□□□□□ -2.12
PRP18YGR006W YPL067CQ02754 198 aa1.83□□□□□ -2.12
PRP18YGR006W YLR296WQ05898 108 aa1.83□□□□□ -2.12
PRP18YGR006W DAD1Q12248 94 aa1.83□□□□□ -2.12
PRP18YGR006W YMR030W-AQ3E760 96 aa1.83□□□□□ -2.12
PRP18YGR006W CMC4Q3E7A9 73 aa1.83□□□□□ -2.12
PRP18YGR006W YNL146C-AQ3E7Z1 64 aa1.83□□□□□ -2.12
PRP18YGR006W OST5Q92316 86 aa1.83□□□□□ -2.12
PRP18YGR006W YLR419WQ06698 1435 aaKnown RBP1.83□□□□□ -2.12
PRP18YGR006W TY1B-GR3Q12316 1755 aa1.82□□□□□ -2.12
PRP18YGR006W TY1B-ORQ92393 1755 aa1.82□□□□□ -2.12
PRP18YGR006W TY1B-DR4Q07793 1604 aa1.82□□□□□ -2.12
PRP18YGR006W RTC6O14464 93 aa1.82□□□□□ -2.12
PRP18YGR006W HSP150P32478 413 aa1.82□□□□□ -2.12
PRP18YGR006W YFL051CP43552 160 aa1.82□□□□□ -2.12
PRP18YGR006W YGL149WP53116 101 aa1.82□□□□□ -2.12
PRP18YGR006W PAU12P53343 120 aa1.82□□□□□ -2.12
PRP18YGR006W RSM19P53733 91 aaPredicted RBP1.82□□□□□ -2.12
PRP18YGR006W AVO2Q04749 426 aa1.82□□□□□ -2.12
PRP18YGR006W GPI11Q06636 219 aa1.82□□□□□ -2.12
PRP18YGR006W DOP1Q03921 1698 aa1.82□□□□□ -2.12
PRP18YGR006W FAS2P19097 1887 aaKnown RBP1.82□□□□□ -2.12
PRP18YGR006W GDB1Q06625 1536 aa1.81□□□□□ -2.12
PRP18YGR006W TY1B-DR5P0C2I2 1755 aa1.81□□□□□ -2.12
PRP18YGR006W TY1B-DR6P0C2I3 1755 aa1.81□□□□□ -2.12
PRP18YGR006W TY1B-LR2P0C2I5 1755 aa1.81□□□□□ -2.12
PRP18YGR006W TY1B-LR3P0C2I6 1755 aaKnown RBP1.81□□□□□ -2.12
PRP18YGR006W TY1B-PR1P0C2I9 1755 aaKnown RBP1.81□□□□□ -2.12
PRP18YGR006W TY1B-PR3P0C2J1 1755 aaKnown RBP1.81□□□□□ -2.12
PRP18YGR006W TY1B-JR1P47098 1755 aa1.81□□□□□ -2.12
PRP18YGR006W TY1B-ML2Q03434 1755 aaKnown RBP1.81□□□□□ -2.12
PRP18YGR006W TY1B-ER1Q03612 1755 aa1.81□□□□□ -2.12
PRP18YGR006W TY1B-ML1Q04711 1755 aaKnown RBP1.81□□□□□ -2.12
PRP18YGR006W TY1B-GR2Q12269 1755 aa1.81□□□□□ -2.12
PRP18YGR006W TY1B-OLQ12273 1755 aa1.81□□□□□ -2.12
PRP18YGR006W TY1B-PLQ12414 1755 aaKnown RBP1.81□□□□□ -2.12
PRP18YGR006W RRT15Q3E811 62 aa1.81□□□□□ -2.12
PRP18YGR006W NUP159P40477 1460 aa1.81□□□□□ -2.12
PRP18YGR006W PAU2P32612 120 aa1.8□□□□□ -2.12
PRP18YGR006W YHR138CP38841 114 aaPredicted RBP1.8□□□□□ -2.12
PRP18YGR006W YIR020CP40575 100 aa1.8□□□□□ -2.12
PRP18YGR006W RPL22BP56628 122 aaKnown RBP1.8□□□□□ -2.12
PRP18YGR006W MET31Q03081 177 aa1.8□□□□□ -2.12
PRP18YGR006W MYO1P08964 1928 aa1.79□□□□□ -2.12
PRP18YGR006W RPB7P34087 171 aa1.79□□□□□ -2.12
PRP18YGR006W PCC1Q3E833 88 aa1.79□□□□□ -2.12
PRP18YGR006W SIN3P22579 1536 aa1.79□□□□□ -2.12
PRP18YGR006W SEC7P11075 2009 aaKnown RBP1.78□□□□□ -2.12
PRP18YGR006W XRN1P22147 1528 aaKnown RBP1.78□□□□□ -2.12
PRP18YGR006W YHR213WP0CI67 198 aa1.78□□□□□ -2.12
PRP18YGR006W ATG8P38182 117 aaRIP-Chip data1.78□□□□□ -2.12not detected
PRP18YGR006W YHL005CP38752 130 aa1.78□□□□□ -2.12
PRP18YGR006W CYB5P40312 120 aa1.78□□□□□ -2.12
PRP18YGR006W YIL014C-AQ02598 104 aa1.78□□□□□ -2.12
PRP18YGR006W YDR042CQ03205 200 aa1.78□□□□□ -2.12
PRP18YGR006W TCB3Q03640 1545 aaKnown RBP1.77□□□□□ -2.13
PRP18YGR006W SCC2Q04002 1493 aa1.77□□□□□ -2.13
PRP18YGR006W PAU19P0CE85 124 aa1.77□□□□□ -2.13
PRP18YGR006W PAU3P25610 124 aa1.77□□□□□ -2.13
PRP18YGR006W SRX1P36077 127 aa1.77□□□□□ -2.13
PRP18YGR006W PAU24P38155 120 aa1.77□□□□□ -2.13
PRP18YGR006W SNN1P48232 102 aa1.77□□□□□ -2.13
PRP18YGR006W YLR194CQ05777 254 aa1.77□□□□□ -2.13
PRP18YGR006W YLR363W-AQ3E747 85 aa1.77□□□□□ -2.13
PRP18YGR006W YMR175W-AQ3E766 64 aa1.77□□□□□ -2.13
PRP18YGR006W MLP1Q02455 1875 aaKnown RBP1.77□□□□□ -2.13
PRP18YGR006W POL1P13382 1468 aa1.76□□□□□ -2.13
PRP18YGR006W MMS22Q06164 1454 aa1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 97.5 ms