RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C YIR021W-AQ3E739 70 aa1.87□□□□□ -2.11
MSH4YFL003C YCR050CP25630 102 aa1.86□□□□□ -2.11
MSH4YFL003C AIM11P87275 137 aa1.86□□□□□ -2.11
MSH4YFL003C FIT2Q08906 153 aa1.86□□□□□ -2.11
MSH4YFL003C ADK1P07170 222 aaKnown RBP1.86□□□□□ -2.11
MSH4YFL003C UTR5P32630 166 aa1.86□□□□□ -2.11
MSH4YFL003C PHS1P40857 217 aa1.86□□□□□ -2.11
MSH4YFL003C SPG1P50088 95 aa1.86□□□□□ -2.11
MSH4YFL003C ATP19P81451 68 aa1.86□□□□□ -2.11
MSH4YFL003C YBL010CP32788 280 aa1.85□□□□□ -2.11
MSH4YFL003C YGR269WP40326 108 aa1.85□□□□□ -2.11
MSH4YFL003C LSM8P47093 109 aaKnown RBP1.85□□□□□ -2.11
MSH4YFL003C SAE3P89114 91 aa1.85□□□□□ -2.11
MSH4YFL003C MDM35O60200 86 aa1.85□□□□□ -2.11
MSH4YFL003C KIN28P06242 306 aa1.85□□□□□ -2.11
MSH4YFL003C YKR045CP36138 183 aa1.85□□□□□ -2.11
MSH4YFL003C YHL042WP38729 150 aa1.85□□□□□ -2.11
MSH4YFL003C FLX1P40464 311 aa1.85□□□□□ -2.11
MSH4YFL003C ALB1P47019 175 aaPredicted RBP1.85□□□□□ -2.11
MSH4YFL003C IRC19Q07843 230 aa1.85□□□□□ -2.11
MSH4YFL003C LHP1P33399 275 aaKnown RBP1.84□□□□□ -2.11
MSH4YFL003C TMA19P35691 167 aaKnown RBP1.84□□□□□ -2.11
MSH4YFL003C LDB18Q07887 179 aa1.84□□□□□ -2.11
MSH4YFL003C ACC1Q00955 2233 aaKnown RBP1.84□□□□□ -2.12
MSH4YFL003C YAL064WP39711 94 aa1.84□□□□□ -2.12
MSH4YFL003C TMA23Q03525 211 aa1.84□□□□□ -2.12
MSH4YFL003C STF2P16965 84 aa1.83□□□□□ -2.12
MSH4YFL003C DIE2P50076 525 aa1.83□□□□□ -2.12
MSH4YFL003C YCL001W-AP87012 153 aa1.83□□□□□ -2.12
MSH4YFL003C ELP6Q04868 273 aa1.83□□□□□ -2.12
MSH4YFL003C YOR097CQ12274 175 aaPredicted RBP1.83□□□□□ -2.12
MSH4YFL003C YMR030W-AQ3E760 96 aa1.83□□□□□ -2.12
MSH4YFL003C UTP20P35194 2493 aaKnown RBP1.83□□□□□ -2.12
MSH4YFL003C AIM36Q03798 255 aa1.83□□□□□ -2.12
MSH4YFL003C NMA1Q06178 401 aaKnown RBP1.83□□□□□ -2.12
MSH4YFL003C YHR007C-AQ07074 71 aa1.83□□□□□ -2.12
MSH4YFL003C YOR385WQ08909 290 aa1.83□□□□□ -2.12
MSH4YFL003C FCF2Q12035 217 aaPredicted RBP1.83□□□□□ -2.12
MSH4YFL003C RPB11P38902 120 aa1.82□□□□□ -2.12
MSH4YFL003C IGO1P53897 168 aa1.82□□□□□ -2.12
MSH4YFL003C MZM1Q03429 123 aaPredicted RBP1.82□□□□□ -2.12
MSH4YFL003C DDP1Q99321 188 aaKnown RBP1.82□□□□□ -2.12
MSH4YFL003C IRA1P18963 3092 aa1.82□□□□□ -2.12
MSH4YFL003C NMT1P14743 455 aa1.82□□□□□ -2.12
MSH4YFL003C ETR1P38071 380 aa1.82□□□□□ -2.12
MSH4YFL003C SFT2P38166 215 aa1.82□□□□□ -2.12
MSH4YFL003C GAT4P40569 121 aa1.82□□□□□ -2.12
MSH4YFL003C KEI1Q06346 221 aa1.82□□□□□ -2.12
MSH4YFL003C YDL157CQ12082 118 aa1.82□□□□□ -2.12
MSH4YFL003C BEM2P39960 2167 aaKnown RBP1.81□□□□□ -2.12
MSH4YFL003C RPS25BP0C0T4 108 aaKnown RBP1.81□□□□□ -2.12
MSH4YFL003C HPA3P39979 161 aa1.81□□□□□ -2.12
MSH4YFL003C RGM1Q00453 211 aa1.81□□□□□ -2.12
MSH4YFL003C YLR042CQ07990 161 aa1.81□□□□□ -2.12
MSH4YFL003C RPS25AQ3E792 108 aaPredicted RBP1.81□□□□□ -2.12
MSH4YFL003C COX5BP00425 151 aa1.81□□□□□ -2.12
MSH4YFL003C RPB7P34087 171 aa1.81□□□□□ -2.12
MSH4YFL003C SOM1Q05676 74 aa1.81□□□□□ -2.12
MSH4YFL003C HUT1Q12520 339 aa1.81□□□□□ -2.12
MSH4YFL003C BRR2P32639 2163 aaKnown RBP1.81□□□□□ -2.12
MSH4YFL003C FPR1P20081 114 aaKnown RBP1.8□□□□□ -2.12
MSH4YFL003C RGI1P40043 161 aaPredicted RBP1.8□□□□□ -2.12
MSH4YFL003C ANB1P19211 157 aa1.8□□□□□ -2.12
MSH4YFL003C FYV5P25585 152 aa1.8□□□□□ -2.12
MSH4YFL003C YIL046W-AQ3E7Z4 54 aa1.8□□□□□ -2.12
MSH4YFL003C IRA2P19158 3079 aa1.8□□□□□ -2.12
MSH4YFL003C YGL041W-AP0C5N3 154 aa1.79□□□□□ -2.12
MSH4YFL003C NRG2P38082 220 aa1.79□□□□□ -2.12
MSH4YFL003C PEP8P40335 379 aa1.79□□□□□ -2.12
MSH4YFL003C YOR376W-AQ3E805 51 aa1.79□□□□□ -2.12
MSH4YFL003C FLO9P39712 1322 aa1.79□□□□□ -2.12
MSH4YFL003C HAP2P06774 265 aa1.79□□□□□ -2.12
MSH4YFL003C GSP1P32835 219 aaKnown RBP1.79□□□□□ -2.12
MSH4YFL003C QCR10P37299 77 aa1.79□□□□□ -2.12
MSH4YFL003C YMR252CQ04814 134 aa1.79□□□□□ -2.12
MSH4YFL003C KTI11Q3E840 82 aa1.79□□□□□ -2.12
MSH4YFL003C RAF1Q06891 181 aa1.78□□□□□ -2.12
MSH4YFL003C YHR086W-AQ3E746 53 aa1.78□□□□□ -2.12
MSH4YFL003C CMC4Q3E7A9 73 aa1.78□□□□□ -2.12
MSH4YFL003C MPC1P53157 130 aaKnown RBP1.78□□□□□ -2.12
MSH4YFL003C FYV7Q12247 151 aa1.78□□□□□ -2.12
MSH4YFL003C YER039C-AP0CD97 72 aa1.77□□□□□ -2.13
MSH4YFL003C MET31Q03081 177 aa1.77□□□□□ -2.13
MSH4YFL003C YLR162WQ06235 118 aa1.77□□□□□ -2.13
MSH4YFL003C SRL3P36167 246 aa1.77□□□□□ -2.13
MSH4YFL003C RPS12P48589 143 aaKnown RBP1.77□□□□□ -2.13
MSH4YFL003C AVO2Q04749 426 aa1.77□□□□□ -2.13
MSH4YFL003C YPR153WQ06537 140 aa1.77□□□□□ -2.13
MSH4YFL003C YAR029WP39549 74 aa1.76□□□□□ -2.13
MSH4YFL003C MRPL44P19956 98 aa1.76□□□□□ -2.13
MSH4YFL003C SRX1P36077 127 aa1.76□□□□□ -2.13
MSH4YFL003C YBR219CP38317 127 aa1.76□□□□□ -2.13
MSH4YFL003C YEL014CP39999 101 aa1.76□□□□□ -2.13
MSH4YFL003C HYR1P40581 163 aaKnown RBP1.76□□□□□ -2.13
MSH4YFL003C SEC16P48415 2195 aaKnown RBP1.76□□□□□ -2.13
MSH4YFL003C YCL042WP25572 119 aa1.75□□□□□ -2.13
MSH4YFL003C PAM16P42949 149 aa1.75□□□□□ -2.13
MSH4YFL003C YAE1P47118 141 aaPredicted RBP1.75□□□□□ -2.13
MSH4YFL003C BAT2P47176 376 aaKnown RBP1.75□□□□□ -2.13
MSH4YFL003C NAT5Q08689 176 aa1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 85.8 ms