RNA–Protein interactions for RNA: YER038C

KRE29, Transcript of Subunit of the SMC5-SMC6 complex, yeastyeast

Gene KRE29, Length 1,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KRE29YER038C COA6Q3E846 104 aa3.22□□□□□ -1.89
KRE29YER038C YPL229WQ99395 206 aa3.22□□□□□ -1.89
KRE29YER038C MBF1O14467 151 aaKnown RBP3.21□□□□□ -1.9
KRE29YER038C RPB3P16370 318 aaKnown RBP3.21□□□□□ -1.9
KRE29YER038C ROX3P25046 220 aa3.21□□□□□ -1.9
KRE29YER038C GEP4P38812 185 aa3.21□□□□□ -1.9
KRE29YER038C MST28P39552 234 aa3.21□□□□□ -1.9
KRE29YER038C YFR045WP43617 309 aa3.21□□□□□ -1.9
KRE29YER038C MST27P53176 234 aa3.21□□□□□ -1.9
KRE29YER038C CYT2Q00873 224 aa3.21□□□□□ -1.9
KRE29YER038C SME1Q12330 94 aaPredicted RBP3.21□□□□□ -1.9
KRE29YER038C HUG1Q6Q5K6 68 aa3.21□□□□□ -1.9
KRE29YER038C MRS3P10566 314 aa3.2□□□□□ -1.9
KRE29YER038C ACB1P31787 87 aa3.2□□□□□ -1.9
KRE29YER038C SRP21P32342 167 aa3.2□□□□□ -1.9
KRE29YER038C UTR5P32630 166 aa3.2□□□□□ -1.9
KRE29YER038C ALK2P32789 676 aaPredicted RBP3.2□□□□□ -1.9
KRE29YER038C YKR045CP36138 183 aa3.2□□□□□ -1.9
KRE29YER038C PAM17P36147 197 aa3.2□□□□□ -1.9
KRE29YER038C RPL32P38061 130 aaKnown RBP3.2□□□□□ -1.9
KRE29YER038C ATG8P38182 117 aaRIP-Chip data3.2□□□□□ -1.9not detected
KRE29YER038C RPB11P38902 120 aa3.2□□□□□ -1.9
KRE29YER038C YJL213WP40896 331 aa3.2□□□□□ -1.9
KRE29YER038C VPS55P47111 140 aa3.2□□□□□ -1.9
KRE29YER038C SYM1Q06563 197 aa3.2□□□□□ -1.9
KRE29YER038C DGA1Q08650 418 aa3.2□□□□□ -1.9
KRE29YER038C YOR385WQ08909 290 aa3.2□□□□□ -1.9
KRE29YER038C VMA9Q3E7B6 73 aa3.2□□□□□ -1.9
KRE29YER038C SPT4P32914 102 aaPredicted RBP3.19□□□□□ -1.9
KRE29YER038C RPL14AP36105 138 aaKnown RBP3.19□□□□□ -1.9
KRE29YER038C YAR029WP39549 74 aa3.19□□□□□ -1.9
KRE29YER038C SMD3P43321 101 aaKnown RBP3.19□□□□□ -1.9
KRE29YER038C YPS5P53057 165 aa3.19□□□□□ -1.9
KRE29YER038C YGR164WP53291 111 aa3.19□□□□□ -1.9
KRE29YER038C HOR7Q05827 59 aa3.19□□□□□ -1.9
KRE29YER038C NAT5Q08689 176 aa3.19□□□□□ -1.9
KRE29YER038C YPL162CQ12042 273 aa3.19□□□□□ -1.9
KRE29YER038C YDR029WQ12111 104 aa3.19□□□□□ -1.9
KRE29YER038C YHR212W-AP0CX91 67 aa3.18□□□□□ -1.9
KRE29YER038C POP8P38208 133 aa3.18□□□□□ -1.9
KRE29YER038C YHR138CP38841 114 aaPredicted RBP3.18□□□□□ -1.9
KRE29YER038C GAT4P40569 121 aa3.18□□□□□ -1.9
KRE29YER038C GPI2P46961 280 aa3.18□□□□□ -1.9
KRE29YER038C THG1P53215 237 aaKnown RBP3.18□□□□□ -1.9
KRE29YER038C CRH1P53301 507 aa3.18□□□□□ -1.9
KRE29YER038C PAU23Q07987 124 aa3.18□□□□□ -1.9
KRE29YER038C PAU17Q12370 124 aa3.18□□□□□ -1.9
KRE29YER038C RAD6P06104 172 aa3.17□□□□□ -1.9
KRE29YER038C MRS4P23500 304 aa3.17□□□□□ -1.9
KRE29YER038C YER134CP40081 178 aa3.17□□□□□ -1.9
KRE29YER038C CWP2P43497 92 aa3.17□□□□□ -1.9
KRE29YER038C LSM7P53905 115 aaKnown RBP3.17□□□□□ -1.9
KRE29YER038C YPL264CQ08980 353 aa3.17□□□□□ -1.9
KRE29YER038C KSH1Q8TGJ3 72 aa3.17□□□□□ -1.9
KRE29YER038C SPO13P23624 291 aa3.16□□□□□ -1.9
KRE29YER038C RPL16BP26785 198 aaKnown RBP3.16□□□□□ -1.9
KRE29YER038C APS1P35181 156 aa3.16□□□□□ -1.9
KRE29YER038C MRPS16Q02608 121 aa3.16□□□□□ -1.9
KRE29YER038C YOL029CQ08187 201 aa3.16□□□□□ -1.9
KRE29YER038C ECM12O13529 151 aa3.15□□□□□ -1.9
KRE29YER038C RPS25BP0C0T4 108 aaKnown RBP3.15□□□□□ -1.9
KRE29YER038C MRPL38P35996 138 aaPredicted RBP3.15□□□□□ -1.9
KRE29YER038C MRPL11P36521 249 aaPredicted RBP3.15□□□□□ -1.9
KRE29YER038C YNL198CP40166 100 aa3.15□□□□□ -1.9
KRE29YER038C VMA21P41806 77 aa3.15□□□□□ -1.9
KRE29YER038C YGR018CP53211 109 aa3.15□□□□□ -1.9
KRE29YER038C FSH2Q05015 223 aa3.15□□□□□ -1.9
KRE29YER038C POC4Q12245 148 aaPredicted RBP3.15□□□□□ -1.9
KRE29YER038C RPS25AQ3E792 108 aaPredicted RBP3.15□□□□□ -1.9
KRE29YER038C Q0255P03881 472 aa3.14□□□□□ -1.91
KRE29YER038C POR1P04840 283 aaKnown RBP3.14□□□□□ -1.91
KRE29YER038C CKS1P20486 150 aaKnown RBP3.14□□□□□ -1.91
KRE29YER038C SFT2P38166 215 aa3.14□□□□□ -1.91
KRE29YER038C DFG10P40526 253 aa3.14□□□□□ -1.91
KRE29YER038C MSL1P40567 111 aaPredicted RBP3.14□□□□□ -1.91
KRE29YER038C LST8P41318 303 aa3.14□□□□□ -1.91
KRE29YER038C YHP1Q04116 353 aa3.14□□□□□ -1.91
KRE29YER038C IRC23Q08416 157 aa3.14□□□□□ -1.91
KRE29YER038C TSC3Q3E790 80 aa3.14□□□□□ -1.91
KRE29YER038C YHR139C-AO13536 103 aa3.13□□□□□ -1.91
KRE29YER038C SOD1P00445 154 aaKnown RBP3.13□□□□□ -1.91
KRE29YER038C KRE1P17260 313 aa3.13□□□□□ -1.91
KRE29YER038C YCR085WP25650 117 aa3.13□□□□□ -1.91
KRE29YER038C MRP17P28778 131 aa3.13□□□□□ -1.91
KRE29YER038C MID2P36027 376 aa3.13□□□□□ -1.91
KRE29YER038C YRA2P36036 203 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
KRE29YER038C SMP1P38128 452 aa3.13□□□□□ -1.91
KRE29YER038C YER181CP40097 107 aa3.13□□□□□ -1.91
KRE29YER038C PEX17P40155 199 aa3.13□□□□□ -1.91
KRE29YER038C CYB5P40312 120 aa3.13□□□□□ -1.91
KRE29YER038C KEG1P43614 200 aa3.13□□□□□ -1.91
KRE29YER038C SMD1Q02260 146 aaPredicted RBP3.13□□□□□ -1.91
KRE29YER038C YMR181CQ03231 154 aa3.13□□□□□ -1.91
KRE29YER038C TIM18Q08749 192 aa3.13□□□□□ -1.91
KRE29YER038C YGL258W-AQ3E740 77 aa3.13□□□□□ -1.91
KRE29YER038C RPS8AP0CX39 200 aaKnown RBP3.12□□□□□ -1.91
KRE29YER038C RPS8BP0CX40 200 aaKnown RBP3.12□□□□□ -1.91
KRE29YER038C URA5P13298 226 aaKnown RBP3.12□□□□□ -1.91
KRE29YER038C PHS1P40857 217 aa3.12□□□□□ -1.91
KRE29YER038C EST3Q03096 181 aa3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 153.5 ms